Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6149
(708 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell l... 190 8e-49
AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein. 190 8e-49
L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical pr... 38 0.005
L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 38 0.009
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 38 0.009
AC024810-10|AAF60767.1| 165|Caenorhabditis elegans Hypothetical... 35 0.066
Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical pr... 32 0.35
U51993-1|AAB36851.2| 377|Caenorhabditis elegans Hypothetical pr... 32 0.46
U42846-1|AAA83600.2| 872|Caenorhabditis elegans Hypothetical pr... 30 1.4
AL034488-12|CAD31697.1| 450|Caenorhabditis elegans Hypothetical... 30 1.4
U23452-5|AAK31546.1| 304|Caenorhabditis elegans Hypothetical pr... 30 1.9
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 29 2.5
AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical ... 29 2.5
AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical ... 29 2.5
AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical ... 29 2.5
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 3.3
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 29 3.3
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 29 4.3
AF047657-7|AAK18943.1| 424|Caenorhabditis elegans Hypothetical ... 28 5.7
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 28 7.5
U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass... 28 7.5
U53153-9|AAC69041.1| 511|Caenorhabditis elegans Hypothetical pr... 28 7.5
AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical ... 28 7.5
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z81575-1|CAB04628.1| 277|Caenorhabditis elegans Hypothetical pr... 27 9.9
U50193-8|AAL11478.2| 394|Caenorhabditis elegans Hypothetical pr... 27 9.9
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 27 9.9
>U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell
lineage protein 23 protein.
Length = 665
Score = 190 bits (463), Expect = 8e-49
Identities = 98/232 (42%), Positives = 143/232 (61%), Gaps = 21/232 (9%)
Frame = +1
Query: 76 PSSPAYAAERDACLNYFTRWNETDQVEFVEQLLARMCHYQHGHINAYLKPMLQRDFISML 255
P S Y + + +W+E +Q++F+++++ R+ HYQ G ++ +++PMLQRDFIS L
Sbjct: 28 PLSIDYLQGHEGLIEEVLKWSEHEQLDFMDKIVHRLSHYQLGKVDNFIRPMLQRDFISNL 87
Query: 256 PKKGLDHVAENILSYLDASSLCAAELVCREWLRVISEGMLWKKLIERKVRTDSLWRGLAE 435
P H+ E IL +++ SL + E V W ++ G WKKLIE+ VR+DSLW GL+E
Sbjct: 88 PA----HLVELILFNVNSDSLKSCEEVSTSWRCALARGQHWKKLIEKNVRSDSLWWGLSE 143
Query: 436 RRGWIQYL-----FKPKPGCQHPS----------------HSFYRQLYPKIIKDIQSIED 552
+R W ++L + C+ + H FY +LYPKII+DI +I++
Sbjct: 144 KRQWDKFLNISRDMSVRRICEKFNYDVNIKRDKLDQLILMHVFYSKLYPKIIRDIHNIDN 203
Query: 553 NWRMGKHNLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTLKFGTERHCSAS 708
NW+ G + + RINC+SENSKGVYCLQYDD KIVSGLRDNT+K + S S
Sbjct: 204 NWKRGNYKMTRINCQSENSKGVYCLQYDDDKIVSGLRDNTIKIWDRKDYSCS 255
Score = 31.1 bits (67), Expect = 0.81
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 556 WRMGKHNLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTLK 678
W M L+ + + + +G+ CLQY +VSG DNT++
Sbjct: 370 WSMD--TLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIR 408
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +1
Query: 529 KDIQSIEDN----WRMGKHNLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTLK 678
K + + DN W ++ RI S ++ V CLQYD+ I+SG D T++
Sbjct: 234 KIVSGLRDNTIKIWDRKDYSCSRI--LSGHTGSVLCLQYDNRVIISGSSDATVR 285
>AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein.
Length = 665
Score = 190 bits (463), Expect = 8e-49
Identities = 98/232 (42%), Positives = 143/232 (61%), Gaps = 21/232 (9%)
Frame = +1
Query: 76 PSSPAYAAERDACLNYFTRWNETDQVEFVEQLLARMCHYQHGHINAYLKPMLQRDFISML 255
P S Y + + +W+E +Q++F+++++ R+ HYQ G ++ +++PMLQRDFIS L
Sbjct: 28 PLSIDYLQGHEGLIEEVLKWSEHEQLDFMDKIVHRLSHYQLGKVDNFIRPMLQRDFISNL 87
Query: 256 PKKGLDHVAENILSYLDASSLCAAELVCREWLRVISEGMLWKKLIERKVRTDSLWRGLAE 435
P H+ E IL +++ SL + E V W ++ G WKKLIE+ VR+DSLW GL+E
Sbjct: 88 PA----HLVELILFNVNSDSLKSCEEVSTSWRCALARGQHWKKLIEKNVRSDSLWWGLSE 143
Query: 436 RRGWIQYL-----FKPKPGCQHPS----------------HSFYRQLYPKIIKDIQSIED 552
+R W ++L + C+ + H FY +LYPKII+DI +I++
Sbjct: 144 KRQWDKFLNISRDMSVRRICEKFNYDVNIKRDKLDQLILMHVFYSKLYPKIIRDIHNIDN 203
Query: 553 NWRMGKHNLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTLKFGTERHCSAS 708
NW+ G + + RINC+SENSKGVYCLQYDD KIVSGLRDNT+K + S S
Sbjct: 204 NWKRGNYKMTRINCQSENSKGVYCLQYDDDKIVSGLRDNTIKIWDRKDYSCS 255
Score = 31.1 bits (67), Expect = 0.81
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 556 WRMGKHNLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTLK 678
W M L+ + + + +G+ CLQY +VSG DNT++
Sbjct: 370 WSMD--TLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIR 408
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +1
Query: 529 KDIQSIEDN----WRMGKHNLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTLK 678
K + + DN W ++ RI S ++ V CLQYD+ I+SG D T++
Sbjct: 234 KIVSGLRDNTIKIWDRKDYSCSRI--LSGHTGSVLCLQYDNRVIISGSSDATVR 285
>L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical
protein C02F5.7a protein.
Length = 461
Score = 38.3 bits (85), Expect = 0.005
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 6/150 (4%)
Frame = +1
Query: 250 MLPKKGLDHVAENILSYLDASSLCAAELVCREWLRVISEGMLWKKL----IERKVRTDSL 417
+LPK+ V + S+LD +LC + VCR W + +G W+++ +R V+T ++
Sbjct: 59 VLPKE----VLLKVFSFLDTKALCRSAQVCRSWSILALDGSNWQRVDLFTFQRDVKT-AV 113
Query: 418 WRGLAERRGWIQYLFKPKPGCQHPSHSFYRQLYPKIIKDIQSIEDNWRMGKHNLQRINCR 597
LA R G K GC++ S R + ++E + + +R+
Sbjct: 114 VENLARRCGGFLKELSLK-GCENVHDSALRTFTSR----CPNLE---HLSLYRCKRVTDA 165
Query: 598 SENSKGVYC--LQYDDHKIVSGLRDNTLKF 681
S + G YC L Y + + S + D +K+
Sbjct: 166 SCENLGRYCHKLNYLNLENCSSITDRAMKY 195
>L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical
protein C02F5.7b protein.
Length = 466
Score = 38.3 bits (85), Expect = 0.005
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 6/150 (4%)
Frame = +1
Query: 250 MLPKKGLDHVAENILSYLDASSLCAAELVCREWLRVISEGMLWKKL----IERKVRTDSL 417
+LPK+ V + S+LD +LC + VCR W + +G W+++ +R V+T ++
Sbjct: 59 VLPKE----VLLKVFSFLDTKALCRSAQVCRSWSILALDGSNWQRVDLFTFQRDVKT-AV 113
Query: 418 WRGLAERRGWIQYLFKPKPGCQHPSHSFYRQLYPKIIKDIQSIEDNWRMGKHNLQRINCR 597
LA R G K GC++ S R + ++E + + +R+
Sbjct: 114 VENLARRCGGFLKELSLK-GCENVHDSALRTFTSR----CPNLE---HLSLYRCKRVTDA 165
Query: 598 SENSKGVYC--LQYDDHKIVSGLRDNTLKF 681
S + G YC L Y + + S + D +K+
Sbjct: 166 SCENLGRYCHKLNYLNLENCSSITDRAMKY 195
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 37.5 bits (83), Expect = 0.009
Identities = 50/204 (24%), Positives = 75/204 (36%), Gaps = 19/204 (9%)
Frame = +1
Query: 124 FTRWNETDQVEFVEQLLARMCHYQHGHINAYLKPMLQRDFISMLPKKGLDHVAENILSYL 303
F + +Q++ +LL + A ++P QRDF+S LP + + IL L
Sbjct: 82 FKDLSSAEQMDAFTRLLQESNMTNIRQLRAIIEPHFQRDFLSCLPVE----LGMKILHNL 137
Query: 304 DASSLCAAELVCREWLRVISEGMLWKKL-IER-------KVRTDSLWRGLAERRG-WIQY 456
L V + W + +WK L +E R W+G A G I
Sbjct: 138 TGYDLLKVAQVSKNWKLISEIDKIWKSLGVEEFKHHPDPTDRVTGAWQGTAIAAGVTIPD 197
Query: 457 LFKPKPGCQHPSHSFYR-QLYPKIIK---------DIQSIEDNWRMGKHNLQRINCRSEN 606
+P C H F + Q + I + IE NW + R
Sbjct: 198 HIQP---CDLNVHRFLKLQKFGDIFERAADKSRYLRADKIEKNWNANPIMGSAV-LRGHE 253
Query: 607 SKGVYCLQYDDHKIVSGLRDNTLK 678
+ C+Q D +V+G DNTLK
Sbjct: 254 DHVITCMQIHDDVLVTGSDDNTLK 277
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 37.5 bits (83), Expect = 0.009
Identities = 50/204 (24%), Positives = 75/204 (36%), Gaps = 19/204 (9%)
Frame = +1
Query: 124 FTRWNETDQVEFVEQLLARMCHYQHGHINAYLKPMLQRDFISMLPKKGLDHVAENILSYL 303
F + +Q++ +LL + A ++P QRDF+S LP + + IL L
Sbjct: 84 FKDLSSAEQMDAFTRLLQESNMTNIRQLRAIIEPHFQRDFLSCLPVE----LGMKILHNL 139
Query: 304 DASSLCAAELVCREWLRVISEGMLWKKL-IER-------KVRTDSLWRGLAERRG-WIQY 456
L V + W + +WK L +E R W+G A G I
Sbjct: 140 TGYDLLKVAQVSKNWKLISEIDKIWKSLGVEEFKHHPDPTDRVTGAWQGTAIAAGVTIPD 199
Query: 457 LFKPKPGCQHPSHSFYR-QLYPKIIK---------DIQSIEDNWRMGKHNLQRINCRSEN 606
+P C H F + Q + I + IE NW + R
Sbjct: 200 HIQP---CDLNVHRFLKLQKFGDIFERAADKSRYLRADKIEKNWNANPIMGSAV-LRGHE 255
Query: 607 SKGVYCLQYDDHKIVSGLRDNTLK 678
+ C+Q D +V+G DNTLK
Sbjct: 256 DHVITCMQIHDDVLVTGSDDNTLK 279
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 37.5 bits (83), Expect = 0.009
Identities = 50/204 (24%), Positives = 75/204 (36%), Gaps = 19/204 (9%)
Frame = +1
Query: 124 FTRWNETDQVEFVEQLLARMCHYQHGHINAYLKPMLQRDFISMLPKKGLDHVAENILSYL 303
F + +Q++ +LL + A ++P QRDF+S LP + + IL L
Sbjct: 84 FKDLSSAEQMDAFTRLLQESNMTNIRQLRAIIEPHFQRDFLSCLPVE----LGMKILHNL 139
Query: 304 DASSLCAAELVCREWLRVISEGMLWKKL-IER-------KVRTDSLWRGLAERRG-WIQY 456
L V + W + +WK L +E R W+G A G I
Sbjct: 140 TGYDLLKVAQVSKNWKLISEIDKIWKSLGVEEFKHHPDPTDRVTGAWQGTAIAAGVTIPD 199
Query: 457 LFKPKPGCQHPSHSFYR-QLYPKIIK---------DIQSIEDNWRMGKHNLQRINCRSEN 606
+P C H F + Q + I + IE NW + R
Sbjct: 200 HIQP---CDLNVHRFLKLQKFGDIFERAADKSRYLRADKIEKNWNANPIMGSAV-LRGHE 255
Query: 607 SKGVYCLQYDDHKIVSGLRDNTLK 678
+ C+Q D +V+G DNTLK
Sbjct: 256 DHVITCMQIHDDVLVTGSDDNTLK 279
>AC024810-10|AAF60767.1| 165|Caenorhabditis elegans Hypothetical
protein Y54E10A.13 protein.
Length = 165
Score = 34.7 bits (76), Expect = 0.066
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = -3
Query: 448 SIPSARRGRATANPYGPSSRSVSSTASLPISPSTTRGKPTRP 323
S+P+A G +P SS S SS PI+P+T+ +PTRP
Sbjct: 110 SVPTASGGARNGSPSTRSSTS-SSIQGSPIAPTTSASQPTRP 150
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 457 GTVSIPSARRGRATANPYGPSSRSVSSTASLPISPSTTR-GKP-TRPHIESSRPGT 296
GT ++ + R + + PSS S+ S +S+P + R G P TR SS G+
Sbjct: 81 GTSTVSATRSSHCSVSLPRPSSPSIRSNSSVPTASGGARNGSPSTRSSTSSSIQGS 136
>Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical
protein F58A4.1 protein.
Length = 254
Score = 32.3 bits (70), Expect = 0.35
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = -3
Query: 460 TGTVSIPSARRGRATANPYGPSSRSVSSTASLPISPS---TTRGKPTRPHIESSRPGTIV 290
T T + S R +T P SS + ++T S P S S TT + T+P I + PGT++
Sbjct: 105 TSTSTSTSTSRSTSTVTPTTRSSTTTTAT-STPTSSSKATTTSAQITQPEIPQAAPGTVL 163
>U51993-1|AAB36851.2| 377|Caenorhabditis elegans Hypothetical
protein F56F10.2 protein.
Length = 377
Score = 31.9 bits (69), Expect = 0.46
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Frame = +1
Query: 166 QLLARMCHYQHGHI----NAYLKPMLQRDFISMLP--KKGLDHVAENILSYLDASSLCAA 327
+LL + HY ++ + +P +Q++ I + P + H+ ++ YLD L
Sbjct: 63 ELLTTILHYCMPYLFTQKQQWYRPAVQKEEIIVEPIAQDFESHILADVFKYLDIDDLLNC 122
Query: 328 ELVCREWLRVISE 366
+LVC +W I E
Sbjct: 123 KLVCWKWNATIGE 135
>U42846-1|AAA83600.2| 872|Caenorhabditis elegans Hypothetical
protein T19D2.1 protein.
Length = 872
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 152 WNSWSNSWRGCATTSTVTSMPTSNRCYKG 238
W WS SW C+T + RCY+G
Sbjct: 828 WTGWS-SWSSCSTKCGIGQRTRRRRCYQG 855
>AL034488-12|CAD31697.1| 450|Caenorhabditis elegans Hypothetical
protein Y54G11A.14 protein.
Length = 450
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 345 VVEGDIGRDAVEETDREEGPYGFAVARPRRAEGMDTVPVQTEARLPTSVTL 497
VV+ + DAV E ++EE G + + P + G D ++ PTS +L
Sbjct: 240 VVDAEAIDDAVPEAEKEEAAAGPSASNPLKRSGTDLGTDAPSSKRPTSSSL 290
>U23452-5|AAK31546.1| 304|Caenorhabditis elegans Hypothetical
protein R07G3.6 protein.
Length = 304
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -1
Query: 459 QVLYPSPPLGEAAPQRIRTDLPLDQFLPQHPFRYHP 352
Q L P P + E P I+ LP QF Q PF Y+P
Sbjct: 247 QTLAPLPKIPEPNPYEIKKGLPEPQFKLQDPF-YNP 281
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/48 (45%), Positives = 27/48 (56%)
Frame = -3
Query: 478 SRASV*TGTVSIPSARRGRATANPYGPSSRSVSSTASLPISPSTTRGK 335
SR++V T S PS G +T + GPS+ S ST S PSTT GK
Sbjct: 567 SRSTV--STTSGPSTTSGPSTTS--GPSTTS-GSTKSTTSGPSTTSGK 609
>AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical
protein T28B4.1a protein.
Length = 535
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 271 DHVAENILSYLDASSLCAAELVCREWLRVISEG-MLWK 381
D V +I YL + LVC+ W RV S+ +LWK
Sbjct: 54 DKVLRDIFQYLSPKQINQVGLVCKRW-RVTSQNPLLWK 90
>AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical
protein T28B4.1b protein.
Length = 518
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 271 DHVAENILSYLDASSLCAAELVCREWLRVISEG-MLWK 381
D V +I YL + LVC+ W RV S+ +LWK
Sbjct: 37 DKVLRDIFQYLSPKQINQVGLVCKRW-RVTSQNPLLWK 73
>AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical
protein T28B4.1c protein.
Length = 552
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 271 DHVAENILSYLDASSLCAAELVCREWLRVISEG-MLWK 381
D V +I YL + LVC+ W RV S+ +LWK
Sbjct: 71 DKVLRDIFQYLSPKQINQVGLVCKRW-RVTSQNPLLWK 107
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/76 (27%), Positives = 32/76 (42%)
Frame = -3
Query: 496 SVTDVGSRASV*TGTVSIPSARRGRATANPYGPSSRSVSSTASLPISPSTTRGKPTRPHI 317
+VT ++ T T S + +T PS+ V+ST + S STT PT
Sbjct: 422 TVTTTEPTTTLTTSTASTSTTEPSTSTVTT-SPSTSPVTSTVTSSSSSSTTVTTPTSTES 480
Query: 316 ESSRPGTIVCSLRHGP 269
S+ P + V + P
Sbjct: 481 TSTSPSSTVTTSTTAP 496
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/76 (27%), Positives = 32/76 (42%)
Frame = -3
Query: 496 SVTDVGSRASV*TGTVSIPSARRGRATANPYGPSSRSVSSTASLPISPSTTRGKPTRPHI 317
+VT ++ T T S + +T PS+ V+ST + S STT PT
Sbjct: 422 TVTTTEPTTTLTTSTASTSTTEPSTSTVTT-SPSTSPVTSTVTSSSSSSTTVTTPTSTES 480
Query: 316 ESSRPGTIVCSLRHGP 269
S+ P + V + P
Sbjct: 481 TSTSPSSTVTTSTTAP 496
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 556 WRMGKHNLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTL 675
W++ K L ++ EN C+ +D+ +VSG RD +
Sbjct: 1363 WQIDKGFLTQVLVGHENVVTCCCISFDERLVVSGARDEKI 1402
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -3
Query: 418 TANPYGPSSRSVSSTASLPISPSTTRGKPTRPHIESSRP 302
+ +P P + + ++ + S STT+ PT+P +SRP
Sbjct: 231 STSPTCPKNATAVASVTTTASTSTTKTSPTKPPTPTSRP 269
>AF047657-7|AAK18943.1| 424|Caenorhabditis elegans Hypothetical
protein F37B4.7 protein.
Length = 424
Score = 28.3 bits (60), Expect = 5.7
Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Frame = +1
Query: 115 LNYFTRWNETDQVEFVEQLLARMCHYQHGHINAYLKP-MLQRDFISMLPKKGLDHVAENI 291
L F W ++ + + ++ ++ A+ + +L F++ + L + N
Sbjct: 99 LEVFYGWATATEIAYFAYIYVKVPKTEYKSATAFTRAALLVGRFLAYALAQLL--IGLNW 156
Query: 292 LSYLDASSLCAAELVCREWLRVISEGMLWKKLIERKVRTDSLWRGLAE---RRGWIQYLF 462
SY + + + +L +I G+ WK+ E+K+ +++ L E + ++ YL
Sbjct: 157 TSYSTLNIISLVAMTIAVFLALILPGVEWKEAYEKKLEDNNVQGNLKEIVDQSSYMDYLR 216
Query: 463 KPKPGCQHPSHSFYRQLYPKIIK 531
G +H + YR P I+K
Sbjct: 217 MFFVGLRHNLMAIYRN--PLILK 237
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 424 RATANPYGPSSRSVSSTASLPISPSTTRGKPTRP 323
+ + P S + S+T S I PSTT KP P
Sbjct: 422 KTSPKPTTSPSTTTSTTTSTTIPPSTTTRKPANP 455
>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily
assigned gene nameprotein 162 protein.
Length = 2643
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 401 SVRIRCGAASPSGGDGYSTCSNRSPAANIRHTHSTD 508
+V I C + SPS D Y TC N + T++ D
Sbjct: 306 TVPILCLSESPSANDSYITCGNVEGSEPATKTYAID 341
>U53153-9|AAC69041.1| 511|Caenorhabditis elegans Hypothetical
protein T19A5.5 protein.
Length = 511
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 650 TILWSSYCKQYTPLEFSDLQFILCKLCFPILQL 552
T W SY QY L F D I+ + FP +L
Sbjct: 304 TTTWLSYMDQYRDLNFDDKMTIVQCMWFPFARL 336
>AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical
protein Y51A2D.8 protein.
Length = 386
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 366 RDAVEETDR--EEGPYGFAVARPRRAEGMDTVPVQTEARLPTSV 491
R + ETDR + FAV PRRAE + V TE ++P +V
Sbjct: 250 RCRLRETDRIVPARAFNFAVINPRRAE-EQIIQVLTEWKVPVAV 292
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 182 CATTSTVTSMPTSNRCYKGISSVCCP 259
C ++ PTS C +G VCCP
Sbjct: 1887 CGNSAESIGCPTSYYCRRGPPDVCCP 1912
>Z81575-1|CAB04628.1| 277|Caenorhabditis elegans Hypothetical
protein R08H2.1 protein.
Length = 277
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = +1
Query: 31 QVTSLTSLDSGVRPVPSSPAYAAERDACLNYFTRWNETDQVE 156
++ +++S+ +G + P+SP YA + A L+ +TR D ++
Sbjct: 140 EIVNVSSIVAGPQAQPASPYYACAK-AALDQYTRCTAIDLIQ 180
>U50193-8|AAL11478.2| 394|Caenorhabditis elegans Hypothetical
protein ZK328.6 protein.
Length = 394
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +1
Query: 271 DHVAENILSYLDASSLCAAELVCREWLRVIS 363
D + I D LC E VCR W +I+
Sbjct: 15 DLILRKIFDQYDYPVLCKMERVCRRWTNIIN 45
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +2
Query: 161 WSNSWRGCATTSTVTSMPTSNRC-YKGISSVCCPKKAWTMS 280
+S + C T+ P + C + G+ CCP KA+T S
Sbjct: 657 FSGKFMQCGEGLGGTACPANYECTFDGLVYGCCPSKAYTCS 697
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,407,851
Number of Sequences: 27780
Number of extensions: 451472
Number of successful extensions: 1812
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1808
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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