Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6148
         (766 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075162-1|AAL68032.1|  436|Drosophila melanogaster AT04454p pro...    31   2.3  
AE014298-3025|AAN09548.1|  436|Drosophila melanogaster CG11710-P...    31   2.3  
AE014298-3024|AAF50902.1|  513|Drosophila melanogaster CG11710-P...    31   2.3  

>AY075162-1|AAL68032.1|  436|Drosophila melanogaster AT04454p
           protein.
          Length = 436

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 25/64 (39%), Positives = 29/64 (45%)
 Frame = -1

Query: 649 CISMTPTVRPPEAASKEPKAIREKSSAKIAAVQLKLSIIPKYLCC*TLSSAVICTQDIYL 470
           C+S    VR PE   +  KA REK   K AA Q K S   K L    L  A +  +D  L
Sbjct: 152 CLSCGDPVRTPEEEQQLAKAAREKGGTKSAAKQGKKS--TKELSTQALDKA-LAQRDRLL 208

Query: 469 VYPK 458
            Y K
Sbjct: 209 EYDK 212


>AE014298-3025|AAN09548.1|  436|Drosophila melanogaster CG11710-PA,
           isoform A protein.
          Length = 436

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 25/64 (39%), Positives = 29/64 (45%)
 Frame = -1

Query: 649 CISMTPTVRPPEAASKEPKAIREKSSAKIAAVQLKLSIIPKYLCC*TLSSAVICTQDIYL 470
           C+S    VR PE   +  KA REK   K AA Q K S   K L    L  A +  +D  L
Sbjct: 152 CLSCGDPVRTPEEEQQLAKAAREKGGTKSAAKQGKKS--TKELSTQALDKA-LAQRDRLL 208

Query: 469 VYPK 458
            Y K
Sbjct: 209 EYDK 212


>AE014298-3024|AAF50902.1|  513|Drosophila melanogaster CG11710-PB,
           isoform B protein.
          Length = 513

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 25/64 (39%), Positives = 29/64 (45%)
 Frame = -1

Query: 649 CISMTPTVRPPEAASKEPKAIREKSSAKIAAVQLKLSIIPKYLCC*TLSSAVICTQDIYL 470
           C+S    VR PE   +  KA REK   K AA Q K S   K L    L  A +  +D  L
Sbjct: 152 CLSCGDPVRTPEEEQQLAKAAREKGGTKSAAKQGKKS--TKELSTQALDKA-LAQRDRLL 208

Query: 469 VYPK 458
            Y K
Sbjct: 209 EYDK 212


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,797,348
Number of Sequences: 53049
Number of extensions: 581506
Number of successful extensions: 1281
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1280
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)