Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6147
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY047525-1|AAK77257.1|  448|Drosophila melanogaster GH03119p pro...   404   e-113
AF049912-1|AAC05144.1|  448|Drosophila melanogaster methionine a...   404   e-113
AE014134-1689|AAF52807.1|  448|Drosophila melanogaster CG4008-PA...   404   e-113
BT016100-1|AAV36985.2|  391|Drosophila melanogaster LD30448p pro...    76   6e-14
AE014296-994|AAF50751.1|  391|Drosophila melanogaster CG10576-PA...    76   6e-14
AY113532-1|AAM29537.1|  518|Drosophila melanogaster RE60854p pro...    31   1.3  
AE014134-1885|AAF52949.2|  317|Drosophila melanogaster CG5188-PA...    31   2.2  

>AY047525-1|AAK77257.1|  448|Drosophila melanogaster GH03119p
           protein.
          Length = 448

 Score =  404 bits (994), Expect = e-113
 Identities = 182/249 (73%), Positives = 216/249 (86%), Gaps = 1/249 (0%)
 Frame = +3

Query: 6   KSGKGSSKEQTVPPTIPVAELFPDGNFPEGQIMDHG-PAEGIDERTAKNRFTSEEKRALD 182
           K  KG    QT PPTIP+A+L+PDGNFPEG+I++H  P +  D+RTAK+RFTSEEKRALD
Sbjct: 70  KGNKGKKSGQTDPPTIPIAKLYPDGNFPEGEIVEHPTPKDMPDDRTAKDRFTSEEKRALD 129

Query: 183 RLHKDIYQEIRHAAEAHRQTRKHIRNWIKPGMTMIDICEELEKTARRLIGEDGLKAGLAF 362
           R++ DIYQE+R AAEAHRQTR++++ +IKPGMTMI ICEELE TARRLIGE+GL+AGLAF
Sbjct: 130 RINTDIYQELRQAAEAHRQTRQYMQRYIKPGMTMIQICEELENTARRLIGENGLEAGLAF 189

Query: 363 PTGCSRNHCAAHYTPNTGDTTVLEYDDVVKIDFGTHINGRIIDCAFTLHFNPRYDPLVKG 542
           PTGCS NHCAAHYTPN GD TVL+YDDV KIDFGTHI GRIIDCAFTL FN +YD L++ 
Sbjct: 190 PTGCSLNHCAAHYTPNAGDPTVLQYDDVCKIDFGTHIKGRIIDCAFTLTFNNKYDKLLQA 249

Query: 543 VQEATEAGIKASGVDVRLCDVGAAVQEVMESHEVELDGQMYQVKPIRNLNGHSIEPYKIH 722
           V+EAT  GI+ +G+DVRLCD+GAA+QEVMES+E+ELDG+ Y +K IRNLNGHSI PY+IH
Sbjct: 250 VKEATNTGIREAGIDVRLCDIGAAIQEVMESYEIELDGKTYPIKAIRNLNGHSISPYRIH 309

Query: 723 AGKTVPIVK 749
           AGKTVPIVK
Sbjct: 310 AGKTVPIVK 318


>AF049912-1|AAC05144.1|  448|Drosophila melanogaster methionine
           aminopeptidase protein.
          Length = 448

 Score =  404 bits (994), Expect = e-113
 Identities = 182/249 (73%), Positives = 216/249 (86%), Gaps = 1/249 (0%)
 Frame = +3

Query: 6   KSGKGSSKEQTVPPTIPVAELFPDGNFPEGQIMDHG-PAEGIDERTAKNRFTSEEKRALD 182
           K  KG    QT PPTIP+A+L+PDGNFPEG+I++H  P +  D+RTAK+RFTSEEKRALD
Sbjct: 70  KGNKGKKSGQTDPPTIPIAKLYPDGNFPEGEIVEHPTPKDMPDDRTAKDRFTSEEKRALD 129

Query: 183 RLHKDIYQEIRHAAEAHRQTRKHIRNWIKPGMTMIDICEELEKTARRLIGEDGLKAGLAF 362
           R++ DIYQE+R AAEAHRQTR++++ +IKPGMTMI ICEELE TARRLIGE+GL+AGLAF
Sbjct: 130 RINTDIYQELRQAAEAHRQTRQYMQRYIKPGMTMIQICEELENTARRLIGENGLEAGLAF 189

Query: 363 PTGCSRNHCAAHYTPNTGDTTVLEYDDVVKIDFGTHINGRIIDCAFTLHFNPRYDPLVKG 542
           PTGCS NHCAAHYTPN GD TVL+YDDV KIDFGTHI GRIIDCAFTL FN +YD L++ 
Sbjct: 190 PTGCSLNHCAAHYTPNAGDPTVLQYDDVCKIDFGTHIKGRIIDCAFTLTFNNKYDKLLQA 249

Query: 543 VQEATEAGIKASGVDVRLCDVGAAVQEVMESHEVELDGQMYQVKPIRNLNGHSIEPYKIH 722
           V+EAT  GI+ +G+DVRLCD+GAA+QEVMES+E+ELDG+ Y +K IRNLNGHSI PY+IH
Sbjct: 250 VKEATNTGIREAGIDVRLCDIGAAIQEVMESYEIELDGKTYPIKAIRNLNGHSISPYRIH 309

Query: 723 AGKTVPIVK 749
           AGKTVPIVK
Sbjct: 310 AGKTVPIVK 318


>AE014134-1689|AAF52807.1|  448|Drosophila melanogaster CG4008-PA
           protein.
          Length = 448

 Score =  404 bits (994), Expect = e-113
 Identities = 182/249 (73%), Positives = 216/249 (86%), Gaps = 1/249 (0%)
 Frame = +3

Query: 6   KSGKGSSKEQTVPPTIPVAELFPDGNFPEGQIMDHG-PAEGIDERTAKNRFTSEEKRALD 182
           K  KG    QT PPTIP+A+L+PDGNFPEG+I++H  P +  D+RTAK+RFTSEEKRALD
Sbjct: 70  KGNKGKKSGQTDPPTIPIAKLYPDGNFPEGEIVEHPTPKDMPDDRTAKDRFTSEEKRALD 129

Query: 183 RLHKDIYQEIRHAAEAHRQTRKHIRNWIKPGMTMIDICEELEKTARRLIGEDGLKAGLAF 362
           R++ DIYQE+R AAEAHRQTR++++ +IKPGMTMI ICEELE TARRLIGE+GL+AGLAF
Sbjct: 130 RINTDIYQELRQAAEAHRQTRQYMQRYIKPGMTMIQICEELENTARRLIGENGLEAGLAF 189

Query: 363 PTGCSRNHCAAHYTPNTGDTTVLEYDDVVKIDFGTHINGRIIDCAFTLHFNPRYDPLVKG 542
           PTGCS NHCAAHYTPN GD TVL+YDDV KIDFGTHI GRIIDCAFTL FN +YD L++ 
Sbjct: 190 PTGCSLNHCAAHYTPNAGDPTVLQYDDVCKIDFGTHIKGRIIDCAFTLTFNNKYDKLLQA 249

Query: 543 VQEATEAGIKASGVDVRLCDVGAAVQEVMESHEVELDGQMYQVKPIRNLNGHSIEPYKIH 722
           V+EAT  GI+ +G+DVRLCD+GAA+QEVMES+E+ELDG+ Y +K IRNLNGHSI PY+IH
Sbjct: 250 VKEATNTGIREAGIDVRLCDIGAAIQEVMESYEIELDGKTYPIKAIRNLNGHSISPYRIH 309

Query: 723 AGKTVPIVK 749
           AGKTVPIVK
Sbjct: 310 AGKTVPIVK 318


>BT016100-1|AAV36985.2|  391|Drosophila melanogaster LD30448p
           protein.
          Length = 391

 Score = 75.8 bits (178), Expect = 6e-14
 Identities = 49/146 (33%), Positives = 72/146 (49%), Gaps = 2/146 (1%)
 Frame = +3

Query: 306 EKTARRLIGEDGLKAGLAFPTGCSRNHCAAHYTPNTGDTT-VLEYDDVVKIDFGTHINGR 482
           E+T +    E  LK G+AFPT  S N+C  H++P   D    L+  DVVKID G HI+G 
Sbjct: 58  EETGKVYKKEKDLKKGIAFPTCLSVNNCVCHFSPAKNDADYTLKAGDVVKIDLGAHIDGF 117

Query: 483 IIDCAFTLHFNPRYDPLVKGVQ-EATEAGIKASGVDVRLCDVGAAVQEVMESHEVELDGQ 659
           I   A T+      D  + G Q +   A   A    +RL   GA    + ++  V+   +
Sbjct: 118 IAVAAHTIVVGAAADQKISGRQADVILAAYWAVQAALRLLKSGANNYSLTDA--VQQISE 175

Query: 660 MYQVKPIRNLNGHSIEPYKIHAGKTV 737
            Y+ KPI  +  H ++ +KI   KT+
Sbjct: 176 SYKCKPIEGMLSHELKQFKIDGEKTI 201


>AE014296-994|AAF50751.1|  391|Drosophila melanogaster CG10576-PA,
           isoform A protein.
          Length = 391

 Score = 75.8 bits (178), Expect = 6e-14
 Identities = 49/146 (33%), Positives = 72/146 (49%), Gaps = 2/146 (1%)
 Frame = +3

Query: 306 EKTARRLIGEDGLKAGLAFPTGCSRNHCAAHYTPNTGDTT-VLEYDDVVKIDFGTHINGR 482
           E+T +    E  LK G+AFPT  S N+C  H++P   D    L+  DVVKID G HI+G 
Sbjct: 58  EETGKVYKKEKDLKKGIAFPTCLSVNNCVCHFSPAKNDADYTLKAGDVVKIDLGAHIDGF 117

Query: 483 IIDCAFTLHFNPRYDPLVKGVQ-EATEAGIKASGVDVRLCDVGAAVQEVMESHEVELDGQ 659
           I   A T+      D  + G Q +   A   A    +RL   GA    + ++  V+   +
Sbjct: 118 IAVAAHTIVVGAAADQKISGRQADVILAAYWAVQAALRLLKSGANNYSLTDA--VQQISE 175

Query: 660 MYQVKPIRNLNGHSIEPYKIHAGKTV 737
            Y+ KPI  +  H ++ +KI   KT+
Sbjct: 176 SYKCKPIEGMLSHELKQFKIDGEKTI 201


>AY113532-1|AAM29537.1|  518|Drosophila melanogaster RE60854p
           protein.
          Length = 518

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +3

Query: 549 EATEAGIKASGVDVRLCDVGAAVQEVMESHEVE-LDGQMYQVKPIRNL 689
           EA E G   +GVD+   DV A + E  E HE + +D +  Q  P+  L
Sbjct: 232 EADETGTSGAGVDLGDDDVDADLAEDSEEHESQMIDEEFAQADPLMEL 279


>AE014134-1885|AAF52949.2|  317|Drosophila melanogaster CG5188-PA
           protein.
          Length = 317

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
 Frame = +3

Query: 375 SRNHCAAHYTPNTGDTTVLEYDDVVKIDFGTHINGRIIDCAFTL---HFNPRYDPLVKGV 545
           S N+ A H  P   D   L   D++ ID    +NG   DC+ T    + + R   LV+  
Sbjct: 139 SINNIACHGIP---DDRQLADGDIINIDVTVFLNGYHGDCSETFRVGNVDERGGFLVEAT 195

Query: 546 QEATEAGIKASGVDVRLCDVGAAVQEVMESHEV 644
           +   +  I   G  V   ++G  +    + H++
Sbjct: 196 KSCLDQCISLCGPGVEFNEIGKFIDRYCDEHDL 228


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,818,875
Number of Sequences: 53049
Number of extensions: 761795
Number of successful extensions: 2294
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2287
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)