Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6145
(515 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1146 - 28004896-28005554,28005664-28005844 33 0.14
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 31 0.55
02_04_0586 + 24100329-24100754,24102367-24102429,24102826-24103728 31 0.73
11_06_0610 - 25449085-25453284 30 0.96
09_04_0362 - 16953108-16953155,16953478-16953562,16953626-169537... 30 1.3
01_05_0627 + 23802235-23802853,23803357-23803430,23804207-238043... 30 1.3
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 29 1.7
01_06_1293 - 36050847-36051304,36052343-36052826 29 1.7
07_01_0962 - 8075975-8077282 29 2.9
09_04_0506 - 18188785-18190599 28 3.9
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 28 3.9
02_01_0130 - 938530-939990 28 5.1
08_02_1539 - 27690412-27690588,27690694-27690834,27691493-276915... 27 6.8
06_03_1507 - 30646168-30646254,30646350-30646490,30648109-306482... 27 6.8
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 27 6.8
02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550 27 6.8
12_01_0954 - 9496370-9496643,9497181-9497239,9497574-9498179 27 8.9
09_04_0430 + 17502387-17503505 27 8.9
08_02_0479 + 17627605-17627839,17628965-17629107,17630018-176301... 27 8.9
07_03_1486 + 26899479-26899549,26899861-26899989,26900649-269008... 27 8.9
05_04_0293 - 19898254-19898819,19899698-19899701 27 8.9
03_05_0996 - 29547974-29547977,29548442-29548620,29548827-295489... 27 8.9
>06_03_1146 - 28004896-28005554,28005664-28005844
Length = 279
Score = 33.1 bits (72), Expect = 0.14
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +2
Query: 68 PVQAIQPVRQRVVQRPALRRPAYQPHPIAITPRPLPVTTARALPPATT 211
PV P PA P+ P P+A TP P P + A PA T
Sbjct: 154 PVPMPSPASSPPSPAPAAATPSLAPSPVATTPSPSPSVSPMAPAPAPT 201
>08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 31.1 bits (67), Expect = 0.55
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +3
Query: 36 SEMPTKMKMMSPCRPSSRSDRE*FSAPL*DALHTSHIPSLSHHAH-CQSLQPALYLPRPP 212
SE+ K K+ RP SRS R + H S HH H QSL + +P P
Sbjct: 819 SELRIKPKVAD--RPPSRSSRSHSIGTDRSSTHEGSSHSKKHHEHDSQSLHKSKSVPNIP 876
Query: 213 SDRNCFKLRLNLK 251
D C L++K
Sbjct: 877 KDHVCTVEELSVK 889
>02_04_0586 + 24100329-24100754,24102367-24102429,24102826-24103728
Length = 463
Score = 30.7 bits (66), Expect = 0.73
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +2
Query: 89 VRQRVVQRPALRRPAYQPHPIAITPRPLPVTTARALPPAT 208
VR R P+ YQP P + P P TA+ PP T
Sbjct: 215 VRARDPPAPSHPHVEYQPAPAMLAPEPPQALTAKPAPPPT 254
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 30.3 bits (65), Expect = 0.96
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +1
Query: 82 PAGQTES---SSAPRFKTPCIPATSHRYHTTPTASHYSP 189
P G T S SS P K+P IP TSH + PT Y+P
Sbjct: 732 PEGHTPSPPKSSPPEEKSPPIPPTSHT--SPPTPEEYTP 768
>09_04_0362 -
16953108-16953155,16953478-16953562,16953626-16953702,
16954601-16954641,16955140-16955644,16955897-16956316
Length = 391
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 82 PAGQTESSSAPRFKTPCIPATSHRYHTTPT 171
P+G T SS+ P F TP +S +TPT
Sbjct: 217 PSGATSSSAFPSFSTPASAPSSSSLFSTPT 246
>01_05_0627 +
23802235-23802853,23803357-23803430,23804207-23804364,
23804640-23804964
Length = 391
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = +2
Query: 68 PVQAIQPVRQRVVQRPALRRPAYQPHPIAITPRPLPVTTARALPPATTFR 217
P + + VR VV PA P AI PRP P + PPA R
Sbjct: 147 PGRRPRSVRAEVVAIAPRPPPAEPAEPTAIAPRPPPAESVPKPPPAVAAR 196
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +2
Query: 110 RPALRRPAYQPHPIAITPRPLPVTTARALP 199
RPA R P QP A P P P+T R LP
Sbjct: 118 RPATRPP--QPPSFAAPPLPTPITMRRTLP 145
>01_06_1293 - 36050847-36051304,36052343-36052826
Length = 313
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 113 PALRRPAYQPHPIAITPRPLPVTTARALPPATT 211
P L RP +P P+A+ P +P PPATT
Sbjct: 123 PVLHRPLARPFPLAMAPTAMPPPPP---PPATT 152
>07_01_0962 - 8075975-8077282
Length = 435
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +2
Query: 113 PALRRPAYQPHPIAITPRP-LPVTT 184
PALR+P P P + PRP LPV T
Sbjct: 45 PALRKPTKPPPPPPLHPRPSLPVPT 69
>09_04_0506 - 18188785-18190599
Length = 604
Score = 28.3 bits (60), Expect = 3.9
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +2
Query: 68 PVQAIQPVRQRVVQRPALRRP-AYQPHPIAITPRPLPVTTARALPPA-TTFRPQLLQITA 241
P+QA P Q+ Q+ L+ P + P P P + + A+PPA RP + +
Sbjct: 73 PLQAPPPPPQQQQQQQQLQAPPSLPPPPPQRQPEKVHIPGVAAVPPAPVPDRPNPVHLPP 132
Query: 242 KPQ 250
+PQ
Sbjct: 133 QPQ 135
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 28.3 bits (60), Expect = 3.9
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +2
Query: 77 AIQPVRQRVVQRPALRRPAYQPHPIAITP-RPLPVTTARALPPATTFRPQLLQITAKP 247
A P + RPA+ PA P P ++ P +P A A P +F PQL P
Sbjct: 220 AYAPAKPPTALRPAIP-PAAMPKPPSVAPVQPPQRPPAPATKPPPSFPPQLAPTMPPP 276
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +2
Query: 113 PALRRPAYQPHPIAITPRPLPVTTARALPPATT 211
P P P A P P TT ALPPATT
Sbjct: 266 PPQLAPTMPPPAHAPAETPAPPTTPPALPPATT 298
>02_01_0130 - 938530-939990
Length = 486
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 110 RPALRRPAYQPHPIAITPRPLPVTTARALPPA 205
RP ++P P+P+ P PLP+ LP A
Sbjct: 96 RPMRQKPPKPPNPVRQRPLPLPLPHKTRLPNA 127
>08_02_1539 -
27690412-27690588,27690694-27690834,27691493-27691588,
27691694-27691786,27691909-27692103,27692340-27692438,
27692527-27692753,27692841-27692973
Length = 386
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 68 PVQAIQPVRQRVVQRPALRRPAYQPHPIAITP 163
P Q P R+ + R A RP + HP+ P
Sbjct: 11 PSQLASPARRAALSRSATARPRHHHHPLLRAP 42
>06_03_1507 -
30646168-30646254,30646350-30646490,30648109-30648202,
30648445-30648509,30648934-30649176,30649442-30649499,
30649957-30650037,30650323-30650533,30650975-30651141,
30651216-30651268,30651600-30651681,30651765-30651914,
30652027-30652111,30652189-30652393,30652502-30652573,
30652911-30653456
Length = 779
Score = 27.5 bits (58), Expect = 6.8
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
Frame = +1
Query: 70 RAGHPAGQTESSSAPRFKTPCIPATSH-----RYHTTPTASHYSPRSTSRDHLQTATA 228
R+ A T +S PR + PC P + R HT H SPR +R L +A
Sbjct: 45 RSSSSASATPNSKRPR-RPPCTPESDPPVLALRAHTPDPDPHTSPRRITRSMLLNPSA 101
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 100 SSSAPRFKTPCIPATSHRYHTTPTASHYSPRSTSRDHLQTATASNYG*TS 249
+SSA +P TS Y +PT+ YSP TS + + T+ +Y TS
Sbjct: 1686 TSSAYSPTSPSYNPTSPSYSYSPTSPSYSP--TSPSYSYSPTSPSYSPTS 1733
>02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550
Length = 204
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +2
Query: 113 PALRRPAYQPHPIAITPRPLPVTTARALPPATTFRPQLLQITAKP 247
P RP+ P TP P T A PP+ PQ ++ + P
Sbjct: 34 PRSSRPSESPRSGFSTPATAPRTAASPSPPSPAPSPQQQRVASPP 78
>12_01_0954 - 9496370-9496643,9497181-9497239,9497574-9498179
Length = 312
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +1
Query: 82 PAGQTESSSAPRFKTPCIPATSHRYHTTPTASHYSPRSTSRDHLQTA 222
P+ S P +P +P S H PT+ +PR TS H A
Sbjct: 4 PSKLPSPSLPPSRSSPHVPPCSTLLHQAPTSPCQAPRPTSCFHSYAA 50
>09_04_0430 + 17502387-17503505
Length = 372
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 98 RVVQRPA-LRRPAYQPHPIAITPRPLPVTTARALPPATTFRPQLLQITAKPQ 250
R PA +++P QP P PR P+ T PP +T P+ + PQ
Sbjct: 155 RAYHPPAPMQQPQPQPPPQPTPPRAAPLPTPPRAPPQST-PPRAAPQSTPPQ 205
>08_02_0479 +
17627605-17627839,17628965-17629107,17630018-17630137,
17630497-17630721
Length = 240
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 95 QRVVQRPALRRPAYQPHPIAITPRPLPVTTARALPPATTFRPQ 223
Q ++QR L RP P+ A P P A A P FRP+
Sbjct: 9 QALIQRLRLHRPRPSPYAAAAAPSP----DAAAPPAELLFRPR 47
>07_03_1486 +
26899479-26899549,26899861-26899989,26900649-26900834,
26901025-26901247,26901662-26901666,26901796-26901924,
26902697-26902894,26903138-26903356,26903461-26903699,
26903797-26903888,26904009-26904224,26904327-26904554,
26904631-26904722,26904806-26904899,26905475-26905567,
26905667-26906640,26906727-26906841,26907135-26908895
Length = 1687
Score = 27.1 bits (57), Expect = 8.9
Identities = 20/74 (27%), Positives = 29/74 (39%)
Frame = +2
Query: 5 RPPTTFFQNDFRXXXXXXXXXPVQAIQPVRQRVVQRPALRRPAYQPHPIAITPRPLPVTT 184
R PT+ + FR PVQA P+ + PA+ H + P P +
Sbjct: 98 RSPTSNITSKFRPPSGFQNYHPVQAANPLEYKPNVTPAM-FGNQNLHDVRAAPSP-ALNN 155
Query: 185 ARALPPATTFRPQL 226
R +P + RP L
Sbjct: 156 NRLVPGSGRLRPAL 169
>05_04_0293 - 19898254-19898819,19899698-19899701
Length = 189
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 98 RVVQRPALRRPAYQPHPIAITPRPLP 175
R +RPA RRP PH +A +P P P
Sbjct: 99 RQARRPARRRPLALPHILA-SPNPRP 123
>03_05_0996 -
29547974-29547977,29548442-29548620,29548827-29548905,
29549556-29549577,29550370-29550439,29550589-29550667,
29551252-29551268,29552214-29552295,29553540-29553630,
29554354-29554498,29554653-29554964
Length = 359
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 68 PVQAIQPVRQRVVQRPALRRPAYQPHPIAITPRPL 172
P+ ++ R+R+ RPA R + P P ++P PL
Sbjct: 30 PLPSLIQCRRRLTNRPATVRLSPAPSPCPMSPPPL 64
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,531,382
Number of Sequences: 37544
Number of extensions: 251277
Number of successful extensions: 1094
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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