Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6145
         (515 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   2.0  
AY748829-1|AAV28177.1|  105|Anopheles gambiae cytochrome P450 pr...    24   2.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   2.6  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    24   2.6  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   4.6  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   4.6  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   8.1  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   8.1  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -2

Query: 175  WQWAWCDSDGMWLVCRAS*SGALNYSLSDRLDGLHGLII 59
            W+W W   + +W   +   SG    S+S +L+ L   +I
Sbjct: 2854 WEWDWSKPETVWSTLKGISSG---LSISPKLNRLDKFVI 2889


>AY748829-1|AAV28177.1|  105|Anopheles gambiae cytochrome P450
           protein.
          Length = 105

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +3

Query: 165 AHCQSLQPALYLPRPPSDRNCFKLRLNL 248
           A+  ++QP  YLP     RNC   R  L
Sbjct: 78  ANRNNIQPGTYLPFGAGPRNCIGSRFAL 105


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 15/45 (33%), Positives = 17/45 (37%)
 Frame = +1

Query: 67  ARAGHPAGQTESSSAPRFKTPCIPATSHRYHTTPTASHYSPRSTS 201
           A    P   T SS      TP   A  H Y+T    +  SP S S
Sbjct: 751 ASPSSPIVATSSSGGGGSNTPNSAAAPHPYYTAAAMAAASPLSLS 795


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +2

Query: 71  VQAIQPVRQRVVQRPALRRPAYQPHPIAITPR--PLPVT 181
           V++ +PV Q  V+  ++    +  HP   TP   P+P+T
Sbjct: 356 VKSSEPVEQCPVKLKSIIETLFPTHPTINTPETDPVPIT 394


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 12   PRRSSRTISEMPTKMKMMSPCRPSSRS 92
            P+R  R  S   +K  +MSPC+P++ S
Sbjct: 1324 PQRRRRNSSN--SKHDLMSPCKPTNGS 1348


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 12   PRRSSRTISEMPTKMKMMSPCRPSSRS 92
            P+R  R  S   +K  +MSPC+P++ S
Sbjct: 1321 PQRRRRNSSN--SKHDLMSPCKPTNGS 1345


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +2

Query: 128  PAYQPHPIAITPR-PLPVTTARALPPATT 211
            P  QP P  +TP   + +T   ++PPATT
Sbjct: 1470 PPVQP-PETLTPAGSVAITVEPSVPPATT 1497


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 12/37 (32%), Positives = 15/37 (40%)
 Frame = +1

Query: 67   ARAGHPAGQTESSSAPRFKTPCIPATSHRYHTTPTAS 177
            A A  PA  T + S    +TP         H TPT +
Sbjct: 948  ATAPAPAKTTSTDSTNGLETPTSETVGGGMHRTPTVA 984


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 484,270
Number of Sequences: 2352
Number of extensions: 8319
Number of successful extensions: 24
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)