Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6145
(515 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical p... 35 0.040
Z71264-3|CAA95827.1| 325|Caenorhabditis elegans Hypothetical pr... 31 0.37
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 31 0.49
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 31 0.49
AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical... 31 0.65
U23411-1|AAC46730.2| 231|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 30 1.1
Z69903-1|CAA93772.1| 137|Caenorhabditis elegans Hypothetical pr... 30 1.1
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 30 1.1
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 30 1.1
U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical pr... 29 1.5
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical pr... 28 3.4
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 28 3.4
AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related n... 28 3.4
AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm (l... 28 3.4
Z82279-1|CAB05259.2| 321|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z70205-10|CAA94122.2| 887|Caenorhabditis elegans Hypothetical p... 28 4.6
Z68003-5|CAA91979.2| 887|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z72510-1|CAA96651.1| 572|Caenorhabditis elegans Hypothetical pr... 27 6.0
U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical p... 27 6.0
U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated p... 27 6.0
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 27 6.0
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 27 6.0
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 27 6.0
AC084158-18|AAK68583.1| 300|Caenorhabditis elegans Hypothetical... 27 6.0
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 27 8.0
AF016445-4|AAC69058.1| 312|Caenorhabditis elegans Hypothetical ... 27 8.0
>Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical
protein T06E4.12 protein.
Length = 228
Score = 34.7 bits (76), Expect = 0.040
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +2
Query: 68 PVQAIQPVRQRVVQRPALRRPAYQPHPIAITPRP-LPVTTARALPPATTFRPQLLQITAK 244
PV + P+ RP L PA+ P PI + PRP L A PA P+ + A
Sbjct: 115 PVPPVAPIVSAFAPRPVLAAPAFAPAPI-LAPRPVLAAPAIPAFAPAPLLAPR--PVLAA 171
Query: 245 PQI 253
P I
Sbjct: 172 PAI 174
>Z71264-3|CAA95827.1| 325|Caenorhabditis elegans Hypothetical
protein K07G5.4 protein.
Length = 325
Score = 31.5 bits (68), Expect = 0.37
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +2
Query: 140 PHPIAITPR-PL-PVTTARALPPATTFRPQLLQ 232
P PI I P+ P+ P+ + PP TTF+P+L+Q
Sbjct: 265 PPPIDIRPQLPVRPIMAFQQFPPCTTFQPRLIQ 297
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 31.1 bits (67), Expect = 0.49
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 83 QPVRQRVVQRPALRRPAYQPHPIAITPRPLPVTTARALPPATTFRPQLLQITAKPQIQ 256
QP + + Q+ +++P YQ P +P+ PP F+PQ Q +PQ Q
Sbjct: 2042 QPPQPQYAQQYGIQQPIYQQAPPQQQQQPVYQQPTYQQPPVQQFQPQQQQQYYQPQQQ 2099
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 31.1 bits (67), Expect = 0.49
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 83 QPVRQRVVQRPALRRPAYQPHPIAITPRPLPVTTARALPPATTFRPQLLQITAKPQIQ 256
QP + + Q+ +++P YQ P +P+ PP F+PQ Q +PQ Q
Sbjct: 667 QPPQPQYAQQYGIQQPIYQQAPPQQQQQPVYQQPTYQQPPVQQFQPQQQQQYYQPQQQ 724
>AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5a protein.
Length = 571
Score = 30.7 bits (66), Expect = 0.65
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 124 TPCIPATSHRYHTTPTASHYSPRSTSRDHLQTATASNYG*TSNTV*SRAK 273
+P + HR + H SP S+D + T+T S+ G TS +V S ++
Sbjct: 58 SPVRRSQDHRQRSPEVRRHRSPEKESKDAVVTSTGSSRGATSASVTSSSR 107
>U23411-1|AAC46730.2| 231|Caenorhabditis elegans Hypothetical
protein T25E4.1 protein.
Length = 231
Score = 30.3 bits (65), Expect = 0.85
Identities = 19/44 (43%), Positives = 21/44 (47%)
Frame = +2
Query: 101 VVQRPALRRPAYQPHPIAITPRPLPVTTARALPPATTFRPQLLQ 232
V PAL RPA+ P P+A P PV A A RP L Q
Sbjct: 56 VAAAPALVRPAFAPVPVAAAPAFAPVPVA-----APMVRPMLQQ 94
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +2
Query: 68 PVQAIQPVRQRVVQRPALRR-PAYQPHPIAITPRP-LPVTTARALPPATTFRPQLLQITA 241
P QA +P+ Q+ +P +++ P QP + TP P PV A A +PQ Q A
Sbjct: 160 PAQA-KPIVQQAQAQPVVQKAPTQQPPVVQQTPPPQQPVVQAPVAQQAPPSQPQ--QAQA 216
Query: 242 KPQIQ 256
+P +Q
Sbjct: 217 QPVVQ 221
>Z69903-1|CAA93772.1| 137|Caenorhabditis elegans Hypothetical
protein F46F2.3 protein.
Length = 137
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 77 AIQPVRQRVVQRPALRRPAYQPHPIAITPRPL 172
A QP Q+ +P ++PAYQP P A P+
Sbjct: 52 AYQPQYQQPAYQPHYQQPAYQPQPSAYQTAPV 83
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Frame = +2
Query: 113 PALRRPAYQPHPIAITPRPLPVTTARALP---PATTFRP 220
P PAY P+P A P PLP P PA + P
Sbjct: 80 PPAPAPAYNPYPCATPPCPLPYIPEPVAPVPAPAPVYEP 118
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +2
Query: 68 PVQAIQPVRQRVVQRPALRRPAYQPHPIAITPRPLPVTTARALPPA 205
PV PV RV + P YQP A+ P P P T PA
Sbjct: 159 PVPVQVPVPIRVPVPVPVPTPVYQPTYCAVPPCPAPAATPVYAQPA 204
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = +2
Query: 83 QPVRQRVVQRPALRRPAYQPH---PIAITPRPLP 175
QP +Q +QRPAL P QP PI PRP P
Sbjct: 2052 QP-QQPYIQRPALTLPFQQPQYPPPIPFQPRPAP 2084
>U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical
protein F32A5.2b protein.
Length = 859
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2
Query: 119 LRRPAYQPHPIAITPRPLPVTTARALPP 202
+RRP P +A TPRP VTT R PP
Sbjct: 91 MRRPP--PRKLAQTPRPPVVTTQRPAPP 116
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
protein F32A5.2a protein.
Length = 1000
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2
Query: 119 LRRPAYQPHPIAITPRPLPVTTARALPP 202
+RRP P +A TPRP VTT R PP
Sbjct: 91 MRRPP--PRKLAQTPRPPVVTTQRPAPP 116
>Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical
protein C01C7.1 protein.
Length = 1043
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 124 TPCIPATSHRYHTTPTASHYSPRSTSRDHLQTATASN 234
T P+TS +P SH S +TS HL+ A N
Sbjct: 517 TSSSPSTSRGSQASPAPSHTSSSTTSSVHLRETVARN 553
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +2
Query: 86 PVRQRVVQRPALRRPAYQPHPIAITPRPLPVTTARALPPATTFRPQLLQITAK 244
P R P+ +P +P P P P TT + TT RP + T K
Sbjct: 226 PARPAPYIEPSTAKPQPRPQPPRTRPYVAPSTTTQRYIEPTTQRPTTRRATTK 278
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +2
Query: 92 RQRVVQRPALRRPAYQPHPIAITPRPLPVTTARALPPATTFRP 220
++ V Q P R P TPRP P T R P TT P
Sbjct: 344 KRPVTQAPTTPRATTTRRPTTTTPRPTPRRTRR--PKTTTAAP 384
>AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related
non-receptor tyrosinekinase protein.
Length = 1043
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 124 TPCIPATSHRYHTTPTASHYSPRSTSRDHLQTATASN 234
T P+TS +P SH S +TS HL+ A N
Sbjct: 517 TSSSPSTSRGSQASPAPSHTSSSTTSSVHLRETVARN 553
>AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm
(licensing factor) relatedprotein 4 protein.
Length = 823
Score = 28.3 bits (60), Expect = 3.4
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +1
Query: 70 RAGHPAGQTESSSAPRFKTPCIPATSHRYHTTPTASHYSPRSTSRDHLQTATASNYG 240
R+ PA + +S SA F P +S R + A + SPRSTS +A+A YG
Sbjct: 3 RSNDPA-EPQSESADLFAEPSSQHSSMRSGSEQVAGNMSPRSTS-----SASALQYG 53
>Z82279-1|CAB05259.2| 321|Caenorhabditis elegans Hypothetical
protein R03C1.1 protein.
Length = 321
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +2
Query: 74 QAIQPVRQRVVQRPALRRPAYQPHPIAITPRPLPVTTARALPPATTFRPQL 226
Q QP +Q Q+ ++ Y+ P+ TP P+P T TT P +
Sbjct: 191 QCAQPQQQ---QQQQVQYDTYEYAPVQTTPTPMPTTQVPTTQAPTTQAPTM 238
>Z70205-10|CAA94122.2| 887|Caenorhabditis elegans Hypothetical
protein E02H4.3a protein.
Length = 887
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 68 PVQAIQPVRQRVVQRPALRRPAYQPHPIAITPRPLP 175
P+QA P+R V ++ +L++P + P+ LP
Sbjct: 265 PIQASAPLRPPVAKQNSLQKPPEPKRSVGAPPKALP 300
>Z68003-5|CAA91979.2| 887|Caenorhabditis elegans Hypothetical
protein E02H4.3a protein.
Length = 887
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 68 PVQAIQPVRQRVVQRPALRRPAYQPHPIAITPRPLP 175
P+QA P+R V ++ +L++P + P+ LP
Sbjct: 265 PIQASAPLRPPVAKQNSLQKPPEPKRSVGAPPKALP 300
>Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical
protein K08E3.4 protein.
Length = 643
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 68 PVQAIQPVRQRVVQRPALRRPA-YQPHPIAITPRPLPVTTARALPPATTF 214
PV P R+ V + P+ Y P PIA P P+ V A+ PA ++
Sbjct: 412 PVGTTSPPREPVNRLTEPDEPSTYTPKPIAYEPEPM-VYKPEAMKPAVSY 460
>Z72510-1|CAA96651.1| 572|Caenorhabditis elegans Hypothetical
protein F53B7.2 protein.
Length = 572
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 427 VFFAKRKSFIFHWIGL*SIKRAN 495
+F +K +S I HW+GL KR N
Sbjct: 443 IFSSKYRSIIKHWLGLEKRKRTN 465
>U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical
protein B0207.1 protein.
Length = 564
Score = 27.5 bits (58), Expect = 6.0
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +2
Query: 68 PVQAIQ-PVRQRVVQRPALRRPAYQPHPIAITPRPLPVTTARALPPATTFRPQLLQITAK 244
PVQ Q PV++ Q P P PHP IT + T+ A PP PQ Q+
Sbjct: 108 PVQQPQIPVQRTPPQCP----PPPVPHPPQITQMAPILPTSPAPPPPIPHPPQRAQMNCL 163
Query: 245 P 247
P
Sbjct: 164 P 164
>U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated
protein 2, isoform d protein.
Length = 286
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 79 HPAGQTESSSAPRFKTPCI-PATSHRYHTTPTASHYSPRSTSRD 207
HP Q + +P I P +SH Y+T ++ +Y S S D
Sbjct: 187 HPTSQQQQHQPMYSTSPLISPRSSHSYYTPRSSQYYEIPSPSPD 230
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 79 HPAGQTESSSAPRFKTPCI-PATSHRYHTTPTASHYSPRSTSRD 207
HP Q + +P I P +SH Y+T ++ +Y S S D
Sbjct: 1827 HPTSQQQQHQPMYSTSPLISPRSSHSYYTPRSSQYYEIPSPSPD 1870
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 79 HPAGQTESSSAPRFKTPCI-PATSHRYHTTPTASHYSPRSTSRD 207
HP Q + +P I P +SH Y+T ++ +Y S S D
Sbjct: 1928 HPTSQQQQHQPMYSTSPLISPRSSHSYYTPRSSQYYEIPSPSPD 1971
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 79 HPAGQTESSSAPRFKTPCI-PATSHRYHTTPTASHYSPRSTSRD 207
HP Q + +P I P +SH Y+T ++ +Y S S D
Sbjct: 1928 HPTSQQQQHQPMYSTSPLISPRSSHSYYTPRSSQYYEIPSPSPD 1971
>AC084158-18|AAK68583.1| 300|Caenorhabditis elegans Hypothetical
protein Y69A2AR.9 protein.
Length = 300
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +2
Query: 128 PAYQPHPIAITPRPLPVTTARALPPATTFRPQLLQITAKPQ 250
P P P A +P P VT PP TT Q T P+
Sbjct: 141 PGPGPGPFASSPSPKDVTAEAPTPPKTTKTTQTPGRTLPPE 181
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element on
autosome protein2 protein.
Length = 1758
Score = 27.1 bits (57), Expect = 8.0
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +2
Query: 86 PVRQRVVQRPALRRPAYQPHPIAITPRPLPVTTARALPPATTFRP 220
PV Q+ Q+P L+RPA QP P RP+ + R P+TT +P
Sbjct: 1498 PVSQQF-QQPLLQRPASQPPP----ARPIVKNSRR---PSTTPKP 1534
>AF016445-4|AAC69058.1| 312|Caenorhabditis elegans Hypothetical
protein T05B4.8 protein.
Length = 312
Score = 27.1 bits (57), Expect = 8.0
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 295 NSNHCKTWTRTNRFC 339
+S++C +W RT RFC
Sbjct: 39 SSSNCASWARTTRFC 53
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,635,068
Number of Sequences: 27780
Number of extensions: 190656
Number of successful extensions: 775
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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