Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6141
         (781 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT028843-1|ABI34224.2|  284|Drosophila melanogaster RT01106p pro...    33   0.44 
AE013599-1674|AAF58399.1|  284|Drosophila melanogaster CG4676-PA...    33   0.44 

>BT028843-1|ABI34224.2|  284|Drosophila melanogaster RT01106p
           protein.
          Length = 284

 Score = 33.1 bits (72), Expect = 0.44
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +1

Query: 202 FGISINS-SMFLIETSRRRSFLL*YFLQILTFKWLSCKLAKVLLKPNSLHPSICKLILIM 378
           F I+ N  +  L++TS R+  L          +W SC+  + L+ P S H  +C + ++ 
Sbjct: 63  FNITSNMLACMLVDTSIRKELLKPPLDAAQLARWHSCQDCQTLVPPRSWHCEVCNVCVLK 122

Query: 379 SLARCRY 399
               CR+
Sbjct: 123 RDHHCRF 129


>AE013599-1674|AAF58399.1|  284|Drosophila melanogaster CG4676-PA
           protein.
          Length = 284

 Score = 33.1 bits (72), Expect = 0.44
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +1

Query: 202 FGISINS-SMFLIETSRRRSFLL*YFLQILTFKWLSCKLAKVLLKPNSLHPSICKLILIM 378
           F I+ N  +  L++TS R+  L          +W SC+  + L+ P S H  +C + ++ 
Sbjct: 63  FNITSNMLACMLVDTSIRKELLKPPLDAAQLARWHSCQDCQTLVPPRSWHCEVCNVCVLK 122

Query: 379 SLARCRY 399
               CR+
Sbjct: 123 RDHHCRF 129


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,022,827
Number of Sequences: 53049
Number of extensions: 782395
Number of successful extensions: 1554
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1554
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)