Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6137
(650 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 39 4e-05
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 25 0.48
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 25 0.48
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 25 0.48
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 25 0.48
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 25 0.63
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 1.9
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 1.9
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 23 3.4
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 23 3.4
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 23 3.4
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.9
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.9
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.9
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.9
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.9
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.9
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 22 5.9
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 22 5.9
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.9
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.9
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 22 5.9
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 7.8
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 21 7.8
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 21 7.8
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 39.1 bits (87), Expect = 4e-05
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 18/165 (10%)
Frame = +3
Query: 159 YECVAQSGPQHQATFEFRCKALGESVSASARSKREAKQEAARAML-------------LC 299
Y+ V Q+GP H F + G++ R+K+ AK AA L
Sbjct: 50 YKVVDQTGPTHAPIFTIAVQIDGQTYEGKGRTKKMAKHAAAELALRNIVQFRNTPEVHQA 109
Query: 300 LSTIGHRVP--PPFATEFTQPSHSNQSAGECSEGKAPTVD---SRSYVALLKELCEEYKL 464
++T +P P F ++ T+ + +A + + + + VAL+ EL
Sbjct: 110 INTCQPSIPLEPDFTSDVTERDNHLVNAFKTLTQEPKNTNKFLEKGPVALINEL-----Y 164
Query: 465 PGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAA 599
PGV Y V+D G ++ + F++ +I + + +G +K+ A+ A+
Sbjct: 165 PGVVYKCVSDNGESYAK-FTISVTIDGETFEGTGPSKKLAKAAAS 208
Score = 35.9 bits (79), Expect = 3e-04
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +3
Query: 468 GVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTKRQARQKAAADLYL 614
G Y +V TGP H +F++ I + + G TK+ A+ AAA+L L
Sbjct: 47 GAVYKVVDQTGPTHAPIFTIAVQIDGQTYEGKGRTKKMAKH-AAAELAL 94
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 25.4 bits (53), Expect = 0.48
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 288 WHGLLPA-LLPSLIVQKQRQTHLKPYSGTQMW 196
WHG+L A +LP+ Q +R + + G +MW
Sbjct: 86 WHGVLNATVLPNSCYQ-ERYEYFPGFPGEEMW 116
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 25.4 bits (53), Expect = 0.48
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 560 GVARVQADAGAHAEQAHVRGP 498
G A AG H AH+RGP
Sbjct: 10 GAAAAVTSAGGHGFDAHLRGP 30
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 25.4 bits (53), Expect = 0.48
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 560 GVARVQADAGAHAEQAHVRGP 498
G A AG H AH+RGP
Sbjct: 10 GAAAAVTSAGGHGFDAHLRGP 30
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 25.4 bits (53), Expect = 0.48
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 288 WHGLLPA-LLPSLIVQKQRQTHLKPYSGTQMW 196
WHG+L A +LP+ Q +R + + G +MW
Sbjct: 86 WHGVLNATVLPNSCYQ-ERYEYFPGFPGEEMW 116
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 25.0 bits (52), Expect = 0.63
Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -1
Query: 416 TVHCGRFALGA-LASRLVTMRGLCKFSSKWWGYTVTYC 306
+V C F G L T +C++ WW Y + C
Sbjct: 136 SVECIVFNSGTILCVPFTTYTPVCEYDHTWWPYDILNC 173
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.4 bits (48), Expect = 1.9
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +1
Query: 88 NNKYENSHNSTARNDDETWYRFQSMNV 168
NN Y N++N+ N+ + Y+ +N+
Sbjct: 98 NNNYNNNYNNNYNNNYKKLYKNYIINI 124
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.4 bits (48), Expect = 1.9
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +1
Query: 88 NNKYENSHNSTARNDDETWYRFQSMNV 168
NN Y N++N+ N+ + Y+ +N+
Sbjct: 98 NNNYNNNYNNNYNNNYKKLYKNYIINI 124
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 542 PALARRQRHHQATGATKSRS 601
P LAR+Q TG +SRS
Sbjct: 342 PKLARKQFQKNTTGLERSRS 361
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 326 GYTVTYCRKTQQHGTGC 276
G+T+T KT+ TGC
Sbjct: 813 GFTMTKSGKTRHQNTGC 829
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 158 LWNLYQVSSSFLAVLLWEF 102
L N Y V S VLLW+F
Sbjct: 100 LGNFYFVHESLKNVLLWDF 118
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 69 TGTVKAKSLTIIKFLNLIVP 10
T T++ + T+ F NLIVP
Sbjct: 185 TFTIQIRRRTLYYFFNLIVP 204
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 69 TGTVKAKSLTIIKFLNLIVP 10
T T++ + T+ F NLIVP
Sbjct: 185 TFTIQIRRRTLYYFFNLIVP 204
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 69 TGTVKAKSLTIIKFLNLIVP 10
T T++ + T+ F NLIVP
Sbjct: 185 TFTIQIRRRTLYYFFNLIVP 204
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 69 TGTVKAKSLTIIKFLNLIVP 10
T T++ + T+ F NLIVP
Sbjct: 185 TFTIQIRRRTLYYFFNLIVP 204
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 69 TGTVKAKSLTIIKFLNLIVP 10
T T++ + T+ F NLIVP
Sbjct: 185 TFTIQIRRRTLYYFFNLIVP 204
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 69 TGTVKAKSLTIIKFLNLIVP 10
T T++ + T+ F NLIVP
Sbjct: 185 TFTIQIRRRTLYYFFNLIVP 204
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.8 bits (44), Expect = 5.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 521 QRARQHRPALARRQRHHQATGATKSRS 601
+RARQ R + RH +A A +S S
Sbjct: 229 ERARQSRINAVQSTRHREADDAEESVS 255
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.8 bits (44), Expect = 5.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 521 QRARQHRPALARRQRHHQATGATKSRS 601
+RARQ R + RH +A A +S S
Sbjct: 229 ERARQSRINAVQSTRHREADDAEESVS 255
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 69 TGTVKAKSLTIIKFLNLIVP 10
T T++ + T+ F NLIVP
Sbjct: 253 TFTIQIRRRTLYYFFNLIVP 272
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 69 TGTVKAKSLTIIKFLNLIVP 10
T T++ + T+ F NLIVP
Sbjct: 253 TFTIQIRRRTLYYFFNLIVP 272
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 21.8 bits (44), Expect = 5.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 521 QRARQHRPALARRQRHHQATGATKSRS 601
+RARQ R + RH +A A +S S
Sbjct: 229 ERARQSRINAVQSTRHREADDAEESVS 255
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 545 ALARRQRHHQATGATKSRSRPLLVP 619
ALAR +RH + S RP + P
Sbjct: 235 ALARLERHLERKAWVASFGRPKMTP 259
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 21.4 bits (43), Expect = 7.8
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +3
Query: 246 ARSKREAKQEAARAMLLCLSTIGHRVPP 329
A ++ +Q R LC+ TIG ++ P
Sbjct: 256 AEEYKKIQQILIRMNKLCIQTIGGQIKP 283
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 7.8
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Frame = +3
Query: 324 PPPFATEFTQPSHSNQSAGECSEGKAPTVDSR-SYVAL----LKELCE 452
PP A +FT G+ S G P +D +++A +KE C+
Sbjct: 333 PPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFADIKEKCD 380
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,624
Number of Sequences: 438
Number of extensions: 2806
Number of successful extensions: 28
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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