Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6133
(490 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0468 - 21083754-21083869,21083986-21084069,21085633-210859... 70 9e-13
04_04_0704 + 27401683-27401818,27402761-27402937,27402983-274030... 69 2e-12
03_01_0007 + 79202-79433,80426-80713,80790-80870,81090-81191,816... 64 4e-11
02_05_0175 + 26490186-26490303,26490954-26491184,26491326-264914... 62 2e-10
06_01_0576 - 4073261-4073821,4073891-4074145 49 2e-06
03_02_0032 + 5143223-5143238,5143477-5143526,5144077-5144173,514... 40 0.001
06_01_0051 + 449956-450132,450736-450829,451110-451177,451851-45... 31 0.50
07_03_0298 + 16384922-16385383,16387540-16388562 30 0.87
10_08_0509 + 18419815-18422150,18422249-18422291,18423154-184234... 30 1.1
07_03_0906 + 22481456-22481802,22482105-22482186,22482299-224824... 30 1.1
07_01_0481 - 3621798-3621926,3622572-3622660,3622780-3622933,362... 30 1.1
08_02_1430 - 27048055-27048408,27049674-27049841,27049927-270500... 29 2.0
07_03_0294 + 16342606-16343100,16343359-16344120 29 2.6
11_05_0013 + 18383235-18383702,18385570-18386571 28 3.5
08_02_1311 - 26039741-26039930,26040185-26040316,26040528-260406... 28 3.5
11_04_0391 + 17127309-17127449,17127886-17127950,17129209-171293... 28 4.6
05_02_0120 - 6797954-6798970,6799466-6799951 28 4.6
02_01_0147 - 1048117-1048329,1048522-1049682,1049783-1050070 28 4.6
11_01_0196 - 1547373-1549859 27 6.1
09_06_0274 + 21967740-21968230,21968411-21968550,21968711-219689... 27 6.1
09_02_0560 - 10679432-10680502 27 6.1
07_03_0929 - 22702297-22703010,22703095-22703432,22703668-22703893 27 6.1
06_03_0543 + 21967787-21970261 27 6.1
02_05_1195 - 34898383-34899034,34899123-34899220,34899326-34899334 27 6.1
01_06_0270 + 28048449-28048577,28048915-28048978,28049537-280496... 27 6.1
06_01_0589 + 4235361-4235433,4236484-4237187,4237584-4237805,423... 27 8.1
01_06_1760 - 39697079-39697162,39697280-39697340,39697415-396974... 27 8.1
>06_03_0468 -
21083754-21083869,21083986-21084069,21085633-21085920,
21087525-21087687
Length = 216
Score = 70.1 bits (164), Expect = 9e-13
Identities = 30/56 (53%), Positives = 40/56 (71%)
Frame = +1
Query: 295 GQATVVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPR 462
G TVVLNVYD+ N Y GLG+FHS V+VHGSE+++G H + +GVFE+ P+
Sbjct: 23 GAYTVVLNVYDLTPLNNYLHWCGLGIFHSAVEVHGSEYSFGAHDHPTSGVFEVEPK 78
>04_04_0704 +
27401683-27401818,27402761-27402937,27402983-27403048,
27403139-27403219,27404089-27404207
Length = 192
Score = 68.9 bits (161), Expect = 2e-12
Identities = 28/57 (49%), Positives = 41/57 (71%)
Frame = +1
Query: 295 GQATVVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRD 465
G A+VV+NVYD+ N Y GLG+FHSG++VHG E+ +G H + +GVFE+ P++
Sbjct: 14 GAASVVVNVYDLTPMNNYLYWFGLGIFHSGIEVHGVEYGFGAHEFPTSGVFEVEPKN 70
>03_01_0007 +
79202-79433,80426-80713,80790-80870,81090-81191,
81677-81813
Length = 279
Score = 64.5 bits (150), Expect = 4e-11
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +1
Query: 301 ATVVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPR 462
A + LN+YD+ N Y GLG+FHSG++VHG E+ +G H Y +GVF++ P+
Sbjct: 48 AELYLNIYDISPINHYLYWFGLGIFHSGIEVHGMEYGFGAHEYPTSGVFQVEPK 101
>02_05_0175 +
26490186-26490303,26490954-26491184,26491326-26491406,
26491557-26491684
Length = 185
Score = 62.5 bits (145), Expect = 2e-10
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +1
Query: 295 GQAT-VVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPR 462
G AT V+LNVYD+ N Y G GVFHSG++VHG E+ +G H + +GVFE+ +
Sbjct: 7 GTATPVLLNVYDLTPANDYLYWLGFGVFHSGIEVHGMEYGFGAHDFPSSGVFEVESK 63
>06_01_0576 - 4073261-4073821,4073891-4074145
Length = 271
Score = 49.2 bits (112), Expect = 2e-06
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 7/59 (11%)
Frame = +1
Query: 307 VVLNVYDMYWTNWYTAGAGLGVFHSGVQ----VHGSE---WAYGGHPYAFTGVFEISPR 462
V LNVYD+ N Y GLGV+HSGVQ + S +AYG H A +G+FE++PR
Sbjct: 46 VYLNVYDVTPANGYARWLGLGVYHSGVQGMYALLSSPSILYAYGAHDGAGSGIFEVAPR 104
>03_02_0032 +
5143223-5143238,5143477-5143526,5144077-5144173,
5145272-5145559,5146161-5146402
Length = 230
Score = 39.9 bits (89), Expect = 0.001
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 388 QVHGSEWAYGGHPYAFTGVFEISPR 462
QVHG E+A+G H Y +GVFE+ PR
Sbjct: 54 QVHGVEYAFGAHDYPSSGVFEVEPR 78
>06_01_0051 +
449956-450132,450736-450829,451110-451177,451851-452165
Length = 217
Score = 31.1 bits (67), Expect = 0.50
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 295 GQATVVLNVYDMYWTNWYTAGAGLG-VFHSGVQVHG-SEWAYGGHPYAFTGVFEISP 459
G T +L+V ++ GLG +FH+ +QV+G EW++ G+ TGVF P
Sbjct: 32 GGGTAILHV-----NRFFKDAIGLGGIFHTAIQVYGDEEWSF-GYCENGTGVFSCPP 82
>07_03_0298 + 16384922-16385383,16387540-16388562
Length = 494
Score = 30.3 bits (65), Expect = 0.87
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 246 LH-VAAIAPFRLPAPSARTGDRGPQRLRYVLDELVHCGRGSG 368
LH ++ + P+ LP P+ R DR QRL + E++ R SG
Sbjct: 208 LHLISTMLPY-LPTPAHRRRDRARQRLGEIFTEVIRSRRNSG 248
>10_08_0509 +
18419815-18422150,18422249-18422291,18423154-18423487,
18423766-18423878,18424461-18424589,18424771-18424864,
18424967-18425050,18425859-18426047,18426897-18427017,
18427476-18427692
Length = 1219
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 294 RTGDRGPQRLRYVLDELVHCGRGSGCVPQRCS 389
RTG G + R+V DEL+ GRG+ C+
Sbjct: 29 RTGGSGAEDARHVFDELLRRGRGASIYGLNCA 60
>07_03_0906 +
22481456-22481802,22482105-22482186,22482299-22482400,
22483005-22483315,22483948-22484044,22484522-22484696,
22485074-22485150,22485632-22486027,22486254-22486303,
22487315-22487382,22488142-22488701
Length = 754
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/72 (30%), Positives = 29/72 (40%)
Frame = +2
Query: 233 PCSRLACRCYRAVQTPSTLGPDRRPWSSTFTICIGRIGTLRARVWVCSTAVFKFTDRNGR 412
P R C C +Q PS GP + + T +C+ T+R R K
Sbjct: 613 PRHRPGCSCIVCIQPPSGKGPKHKQ-TCTCNVCM----TVRRRFRTLMMRREKRQQSEKD 667
Query: 413 TGVIRTRSPGSS 448
+GV R R PG S
Sbjct: 668 SGVPRKREPGQS 679
>07_01_0481 -
3621798-3621926,3622572-3622660,3622780-3622933,
3624104-3624111,3625522-3625547,3625757-3625881
Length = 176
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +2
Query: 290 GPDRRPWSSTFTICIGRIGTLRARVWV---CSTAVFKFT 397
GPD PW F++ + + G LR+R+ V S FK T
Sbjct: 42 GPDDTPWDGGFSLPVCQHGNLRSRLTVNSYVSVGTFKLT 80
>08_02_1430 -
27048055-27048408,27049674-27049841,27049927-27050042,
27050153-27050305,27050850-27050993,27051052-27051211,
27051332-27051970
Length = 577
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +3
Query: 324 RYVLDELVHCGRGSGCVPQRCSSSRIGMGVRGSSVRVHRGL---RDIAARRTGTRG 482
RYVL + GRG V +RCS + G + ++R HR L R AA+ G
Sbjct: 76 RYVLGK--ELGRGEFGVTRRCSDAATGEALACKTIRKHRRLAPPRVTAAKAAAAHG 129
>07_03_0294 + 16342606-16343100,16343359-16344120
Length = 418
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 246 LH-VAAIAPFRLPAPSARTGDRGPQRLRYVLDELVHCGRGS 365
LH ++ + P+ LP P+ R DR QRL ++ E++ R S
Sbjct: 215 LHLISGLLPY-LPIPAHRRRDRARQRLGEIITEVIRLRRNS 254
>11_05_0013 + 18383235-18383702,18385570-18386571
Length = 489
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 252 VAAIAPFRLPAPSARTGDRGPQRLRYVLDELVHCGRGSG 368
V+ I P+ LP P+ R DR QRL+ + ++ + SG
Sbjct: 213 VSVIFPY-LPIPAHRRRDRARQRLKEIFATIIKSRKASG 250
>08_02_1311 -
26039741-26039930,26040185-26040316,26040528-26040676,
26040807-26040893,26041338-26041420,26042008-26042137
Length = 256
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 393 NLNTAVEHTQTRARSVPIRPIHIVNVEDHGRL 298
N +T V H++ R ++P+H+V+V H RL
Sbjct: 88 NNDTFVLHSELERRG-KVKPVHVVDVPGHARL 118
>11_04_0391 +
17127309-17127449,17127886-17127950,17129209-17129305,
17129729-17130193,17130505-17130528
Length = 263
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +1
Query: 154 CDAAG*CIRNLLTHQRSQITVSCGICAMFPSC-MSLLSRRSDSQH 285
C A C+ N H R++ T SC + C + L S +S QH
Sbjct: 78 CGAHLDCLENFEDHYRTRHTASCSYECLVEGCGVKLKSYKSRQQH 122
>05_02_0120 - 6797954-6798970,6799466-6799951
Length = 500
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 273 RLPAPSARTGDRGPQRLRYVLDELVHCGRGS 365
RLP P+ R DR RL + ++V RGS
Sbjct: 225 RLPIPAHRRRDRARARLGEIFSDIVRSRRGS 255
>02_01_0147 - 1048117-1048329,1048522-1049682,1049783-1050070
Length = 553
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +3
Query: 252 VAAIAPFRLPAPSARTGDRGPQRLRYVLDELVHCGRGSG 368
VA A PAPS G RG +R+ + L G G
Sbjct: 3 VAVAASLSTPAPSPAAGGRGRRRVNVAVASLRRAAAGGG 41
>11_01_0196 - 1547373-1549859
Length = 828
Score = 27.5 bits (58), Expect = 6.1
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 112 LLFIHVLCSQWRLHCD 159
L ++H CS+W +HCD
Sbjct: 653 LAYLHSECSEWIVHCD 668
>09_06_0274 +
21967740-21968230,21968411-21968550,21968711-21968905,
21969524-21969652,21970063-21970218,21970507-21970589,
21972229-21972433,21972601-21972805,21973059-21973194,
21973990-21974164,21974470-21974528,21974642-21974716,
21974804-21974920,21975010-21975080,21975170-21975473,
21975721-21976086,21976404-21976514
Length = 1005
Score = 27.5 bits (58), Expect = 6.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 355 GAGLGVFHSGVQVHGSEWAYG 417
G G+FHS V V G W +G
Sbjct: 95 GISCGLFHSAVVVDGGAWVWG 115
>09_02_0560 - 10679432-10680502
Length = 356
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 307 VVLNVYDMYWTNWYTAGAGLG-VFHSGVQVHGSEW 408
V+ +YD+YW N G L VF SG HG W
Sbjct: 132 VICALYDLYWLNNRHIGVQLACVFSSG--SHGGGW 164
>07_03_0929 - 22702297-22703010,22703095-22703432,22703668-22703893
Length = 425
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = -2
Query: 471 PFVSRRYLEDPGERVRMTPVRPFRSVNLNTAVEHTQTRARSVPIRPIHIV 322
P V RR + PG + P F + V + + +A SVP+ P+ I+
Sbjct: 13 PRVLRRQQQQPGSAPELPPGFRFHPTDEELVVHYLKKKAASVPL-PVTII 61
>06_03_0543 + 21967787-21970261
Length = 824
Score = 27.5 bits (58), Expect = 6.1
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 112 LLFIHVLCSQWRLHCD 159
L ++H CS+W +HCD
Sbjct: 624 LAYLHHECSEWVIHCD 639
>02_05_1195 - 34898383-34899034,34899123-34899220,34899326-34899334
Length = 252
Score = 27.5 bits (58), Expect = 6.1
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 6/44 (13%)
Frame = +1
Query: 307 VVLNVYDM---YWTNWYTAGAGL---GVFHSGVQVHGSEWAYGG 420
VVLNVYD+ T+ G ++H+GV V+G+E+ +GG
Sbjct: 8 VVLNVYDLSNGLARQLSTSFLGKPIEAIWHTGVVVYGNEYFFGG 51
>01_06_0270 +
28048449-28048577,28048915-28048978,28049537-28049638,
28049971-28050021,28050075-28050172,28050395-28050485,
28050718-28050782,28050913-28051107,28051207-28051326,
28051592-28051662,28051787-28052012,28052330-28052407,
28052507-28052735,28052958-28053097,28053571-28053699
Length = 595
Score = 27.5 bits (58), Expect = 6.1
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -2
Query: 255 RHARREHGANTARYGYLASLM 193
RH RE+ ANT Y YLA M
Sbjct: 234 RHIEREYFANTTEYKYLAHRM 254
>06_01_0589 +
4235361-4235433,4236484-4237187,4237584-4237805,
4237900-4238559
Length = 552
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -3
Query: 428 YG*PPYAHSDP*T*TPLWNTPRPAPAVYQFVQYIS*TLRTTVACPGRG 285
YG P+A +D T L++TP+ + +V + Q S ++ CP +G
Sbjct: 229 YGPDPFAPNDKST-KVLFSTPKTSDSVQLYTQEDSEIIKFNARCPVQG 275
>01_06_1760 -
39697079-39697162,39697280-39697340,39697415-39697479,
39697579-39697860,39697938-39698012,39698121-39698195,
39698343-39698399,39698653-39698726,39698912-39699055,
39699608-39699662,39700027-39700149,39700276-39700320,
39701068-39701160,39701249-39701662
Length = 548
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 184 LLTHQRSQITVSCGICAMFPSCMSLLSRRSDSQHPRPGQA 303
LLT +S G+ A+ P SLL R + + PG+A
Sbjct: 8 LLTAATGSAALSVGVAAVGPRAPSLLLRSASATRRAPGRA 47
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,324,324
Number of Sequences: 37544
Number of extensions: 344889
Number of successful extensions: 1086
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1011709100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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