Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6131
(783 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 2.4
M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 22 5.6
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 5.6
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 5.6
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 5.6
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 5.6
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 5.6
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 5.6
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 5.6
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 5.6
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 5.6
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 5.6
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 5.6
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 5.6
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 22 7.4
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 23.4 bits (48), Expect = 2.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 507 LRHPPPKNGEPS*KYSINALGRYNNFY*SDVCLY 608
LR PP K +P NA G Y Y S+V +Y
Sbjct: 101 LRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIY 134
>M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H15. ).
Length = 74
Score = 22.2 bits (45), Expect = 5.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 499 FNHFATRRRKMANPH 543
+NH+ TRRR++ H
Sbjct: 29 YNHYLTRRRRIEIAH 43
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 165 PGTFVNNNVLHKHFNLNRNF 106
P NNN L ++N N N+
Sbjct: 79 PKIISNNNPLSNNYNYNNNY 98
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 165 PGTFVNNNVLHKHFNLNRNF 106
P NNN L ++N N N+
Sbjct: 79 PKIISNNNSLSNNYNYNNNY 98
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 165 PGTFVNNNVLHKHFNLNRNF 106
P NNN L ++N N N+
Sbjct: 79 PKIISNNNSLSNNYNYNNNY 98
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 165 PGTFVNNNVLHKHFNLNRNF 106
P NNN L ++N N N+
Sbjct: 79 PKIISNNNSLSNNYNYNNNY 98
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 165 PGTFVNNNVLHKHFNLNRNF 106
P NNN L ++N N N+
Sbjct: 79 PKIISNNNSLSNNYNYNNNY 98
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 165 PGTFVNNNVLHKHFNLNRNF 106
P NNN L ++N N N+
Sbjct: 79 PKIISNNNSLSNNYNYNNNY 98
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 165 PGTFVNNNVLHKHFNLNRNF 106
P NNN L ++N N N+
Sbjct: 79 PKIISNNNSLSNNYNYNNNY 98
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 165 PGTFVNNNVLHKHFNLNRNF 106
P NNN L ++N N N+
Sbjct: 79 PKIISNNNSLSNNYNYNNNY 98
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 165 PGTFVNNNVLHKHFNLNRNF 106
P NNN L ++N N N+
Sbjct: 79 PKIISNNNSLSNNYNYNNNY 98
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 165 PGTFVNNNVLHKHFNLNRNF 106
P NNN L ++N N N+
Sbjct: 79 PKIISNNNSLSNNYNYNNNY 98
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 5.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 165 PGTFVNNNVLHKHFNLNRNF 106
P NNN L ++N N N+
Sbjct: 312 PKIISNNNSLSNNYNYNNNY 331
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 5.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 165 PGTFVNNNVLHKHFNLNRNF 106
P NNN L ++N N N+
Sbjct: 312 PKIISNNNSLSNNYNYNNNY 331
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.8 bits (44), Expect = 7.4
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 709 SHDVVKRRPVNCNTTHYRANWVPGP 635
S + K++P +C+T YR V P
Sbjct: 560 SDECNKKQPSDCDTLEYRNGEVTTP 584
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,298
Number of Sequences: 438
Number of extensions: 4146
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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