BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6128
(373 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC071771-1|AAH71771.1| 239|Homo sapiens KIAA1641 protein protein. 29 6.3
AK074570-1|BAC11066.1| 239|Homo sapiens protein ( Homo sapiens ... 29 6.3
>BC071771-1|AAH71771.1| 239|Homo sapiens KIAA1641 protein protein.
Length = 239
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -1
Query: 82 RLLSHGEGITSCNKNQTRKIIICV 11
+LLSHG I C+KN+ + +++ V
Sbjct: 137 KLLSHGTNIEECSKNEYQPLLLAV 160
>AK074570-1|BAC11066.1| 239|Homo sapiens protein ( Homo sapiens
cDNA FLJ90089 fis, clone HEMBA1005267, weakly similar to
ANKYRIN, BRAIN VARIANT 1. ).
Length = 239
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -1
Query: 82 RLLSHGEGITSCNKNQTRKIIICV 11
+LLSHG I C+KN+ + +++ V
Sbjct: 137 KLLSHGTNIEECSKNEYQPLLLAV 160
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,170,208
Number of Sequences: 237096
Number of extensions: 1100068
Number of successful extensions: 1659
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1659
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2421480012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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