Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6128
         (373 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y00221-1|CAA68368.1|  710|Drosophila melanogaster protein ( Dros...    28   4.5  
J03148-1|AAA28442.1|  710|Drosophila melanogaster protein ( D.me...    28   4.5  
BT003251-1|AAO25008.1|  744|Drosophila melanogaster LD29371p pro...    28   4.5  
AE014134-1863|AAF52934.2|  710|Drosophila melanogaster CG5102-PA...    28   4.5  
BT028843-1|ABI34224.2|  284|Drosophila melanogaster RT01106p pro...    27   7.9  
AE013599-1674|AAF58399.1|  284|Drosophila melanogaster CG4676-PA...    27   7.9  

>Y00221-1|CAA68368.1|  710|Drosophila melanogaster protein (
           Drosophila mRNA forthe sex determining gene
           daughterless. ).
          Length = 710

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 125 AQHECTSTSYPLGHDDFKMTFHVCWHSI 208
           AQH   ST+ PLGH     T H   H++
Sbjct: 206 AQHSALSTAGPLGHHSLNHTPHAHSHTL 233


>J03148-1|AAA28442.1|  710|Drosophila melanogaster protein (
           D.melanogaster daughterlessprotein (da) mRNA, complete
           cds. ).
          Length = 710

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 125 AQHECTSTSYPLGHDDFKMTFHVCWHSI 208
           AQH   ST+ PLGH     T H   H++
Sbjct: 206 AQHSALSTAGPLGHHSLNHTPHAHSHTL 233


>BT003251-1|AAO25008.1|  744|Drosophila melanogaster LD29371p
           protein.
          Length = 744

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 125 AQHECTSTSYPLGHDDFKMTFHVCWHSI 208
           AQH   ST+ PLGH     T H   H++
Sbjct: 206 AQHSALSTAGPLGHHSLNHTPHAHSHTL 233


>AE014134-1863|AAF52934.2|  710|Drosophila melanogaster CG5102-PA
           protein.
          Length = 710

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 125 AQHECTSTSYPLGHDDFKMTFHVCWHSI 208
           AQH   ST+ PLGH     T H   H++
Sbjct: 206 AQHSALSTAGPLGHHSLNHTPHAHSHTL 233


>BT028843-1|ABI34224.2|  284|Drosophila melanogaster RT01106p
           protein.
          Length = 284

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +2

Query: 131 HECTSTSYPLGHDDFKMTFHVCWHSII*QIAALHSENIF 247
           H C  T   +GH +++  F+   + II  +AA   E+I+
Sbjct: 125 HHCRFTCCCIGHHNYRYFFYYLVYMIIGSLAAAIMESIY 163


>AE013599-1674|AAF58399.1|  284|Drosophila melanogaster CG4676-PA
           protein.
          Length = 284

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +2

Query: 131 HECTSTSYPLGHDDFKMTFHVCWHSII*QIAALHSENIF 247
           H C  T   +GH +++  F+   + II  +AA   E+I+
Sbjct: 125 HHCRFTCCCIGHHNYRYFFYYLVYMIIGSLAAAIMESIY 163


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,855,801
Number of Sequences: 53049
Number of extensions: 341622
Number of successful extensions: 557
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 984962268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)