Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6119
         (705 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010024-1|AAQ22493.1|  776|Drosophila melanogaster RE08173p pro...   101   1e-21
AE014134-1380|AAN10650.1|  768|Drosophila melanogaster CG7356-PB...   101   1e-21
AE014134-1379|AAF52590.2|  776|Drosophila melanogaster CG7356-PA...   101   1e-21
AE014296-504|AAF47679.1|  339|Drosophila melanogaster CG16976-PA...    29   8.1  
AE014134-1416|ABI31300.1| 2682|Drosophila melanogaster CG8486-PC...    29   8.1  
AE014134-1415|AAN11153.1| 2720|Drosophila melanogaster CG8486-PB...    29   8.1  
AE014134-1414|AAF52611.1| 2771|Drosophila melanogaster CG8486-PA...    29   8.1  

>BT010024-1|AAQ22493.1|  776|Drosophila melanogaster RE08173p protein.
          Length = 776

 Score =  101 bits (241), Expect = 1e-21
 Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 3/231 (1%)
 Frame = +1

Query: 7    EITHEYKTVDSSSPERLAIIASCRGYQRLQQYYEYPDRNFEDVYFDLMDIDIVPYGQPFD 186
            +IT  YK  + S  ER  ++ + +  +     Y Y + NF D+ FD+   D +  GQ F 
Sbjct: 497  DITDTYKHAERSEEERSTMLKALKQSRHAFSRY-YLNDNFNDIEFDMELKDDIKIGQSFS 555

Query: 187  CTMNIQNKSHEDRTIWCV--LTASSCYYTGAIASRVRRAQGEFIVRAGQREVLKLHVTPQ 360
              + + NKS E RT      ++  +  YTG  A  V+    E  +     + +++ V  +
Sbjct: 556  VVLKVSNKS-ESRTHMATGQISCDAVLYTGVGAVEVKTLGFELELEPKSSDYVRMEVIFE 614

Query: 361  EYMDKLVDHSMVKVHAMAYVKQTRQAWSDEDDFPLHKPRMQVQVRSQPCVGQ-ECAITFS 537
            EY DKL   +  ++ A A VK T   +  +DDF + KP ++ Q+     V Q E  +   
Sbjct: 615  EYYDKLSSQAAFQISAAAKVKDTDYDYYAQDDFRVRKPDIKFQLGEAAIVAQKELDVILR 674

Query: 538  FQNPLNVQLTDCYFTFEGPGVQRPRQIRFRDVKPGEFVNYQDKFVAAAPGR 690
             +NPL + L    FT EGPG+++P + +  ++  G       K+     GR
Sbjct: 675  LENPLPIPLHKGVFTVEGPGIEQPLKFKIAEIPVGGTAAATFKYTPPYAGR 725


>AE014134-1380|AAN10650.1|  768|Drosophila melanogaster CG7356-PB,
            isoform B protein.
          Length = 768

 Score =  101 bits (241), Expect = 1e-21
 Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 3/231 (1%)
 Frame = +1

Query: 7    EITHEYKTVDSSSPERLAIIASCRGYQRLQQYYEYPDRNFEDVYFDLMDIDIVPYGQPFD 186
            +IT  YK  + S  ER  ++ + +  +     Y Y + NF D+ FD+   D +  GQ F 
Sbjct: 489  DITDTYKHAERSEEERSTMLKALKQSRHAFSRY-YLNDNFNDIEFDMELKDDIKIGQSFS 547

Query: 187  CTMNIQNKSHEDRTIWCV--LTASSCYYTGAIASRVRRAQGEFIVRAGQREVLKLHVTPQ 360
              + + NKS E RT      ++  +  YTG  A  V+    E  +     + +++ V  +
Sbjct: 548  VVLKVSNKS-ESRTHMATGQISCDAVLYTGVGAVEVKTLGFELELEPKSSDYVRMEVIFE 606

Query: 361  EYMDKLVDHSMVKVHAMAYVKQTRQAWSDEDDFPLHKPRMQVQVRSQPCVGQ-ECAITFS 537
            EY DKL   +  ++ A A VK T   +  +DDF + KP ++ Q+     V Q E  +   
Sbjct: 607  EYYDKLSSQAAFQISAAAKVKDTDYDYYAQDDFRVRKPDIKFQLGEAAIVAQKELDVILR 666

Query: 538  FQNPLNVQLTDCYFTFEGPGVQRPRQIRFRDVKPGEFVNYQDKFVAAAPGR 690
             +NPL + L    FT EGPG+++P + +  ++  G       K+     GR
Sbjct: 667  LENPLPIPLHKGVFTVEGPGIEQPLKFKIAEIPVGGTAAATFKYTPPYAGR 717


>AE014134-1379|AAF52590.2|  776|Drosophila melanogaster CG7356-PA,
            isoform A protein.
          Length = 776

 Score =  101 bits (241), Expect = 1e-21
 Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 3/231 (1%)
 Frame = +1

Query: 7    EITHEYKTVDSSSPERLAIIASCRGYQRLQQYYEYPDRNFEDVYFDLMDIDIVPYGQPFD 186
            +IT  YK  + S  ER  ++ + +  +     Y Y + NF D+ FD+   D +  GQ F 
Sbjct: 497  DITDTYKHAERSEEERSTMLKALKQSRHAFSRY-YLNDNFNDIEFDMELKDDIKIGQSFS 555

Query: 187  CTMNIQNKSHEDRTIWCV--LTASSCYYTGAIASRVRRAQGEFIVRAGQREVLKLHVTPQ 360
              + + NKS E RT      ++  +  YTG  A  V+    E  +     + +++ V  +
Sbjct: 556  VVLKVSNKS-ESRTHMATGQISCDAVLYTGVGAVEVKTLGFELELEPKSSDYVRMEVIFE 614

Query: 361  EYMDKLVDHSMVKVHAMAYVKQTRQAWSDEDDFPLHKPRMQVQVRSQPCVGQ-ECAITFS 537
            EY DKL   +  ++ A A VK T   +  +DDF + KP ++ Q+     V Q E  +   
Sbjct: 615  EYYDKLSSQAAFQISAAAKVKDTDYDYYAQDDFRVRKPDIKFQLGEAAIVAQKELDVILR 674

Query: 538  FQNPLNVQLTDCYFTFEGPGVQRPRQIRFRDVKPGEFVNYQDKFVAAAPGR 690
             +NPL + L    FT EGPG+++P + +  ++  G       K+     GR
Sbjct: 675  LENPLPIPLHKGVFTVEGPGIEQPLKFKIAEIPVGGTAAATFKYTPPYAGR 725


>AE014296-504|AAF47679.1|  339|Drosophila melanogaster CG16976-PA
           protein.
          Length = 339

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
 Frame = +1

Query: 136 YFDLMDIDIVPYGQPF---DCTMNIQNKSHEDRTIWCVL 243
           Y D+   D+VP+ +     +C++ +Q    +D+ IWC L
Sbjct: 104 YIDIQLWDLVPHTESIFLGECSIELQQAFLDDQAIWCRL 142


>AE014134-1416|ABI31300.1| 2682|Drosophila melanogaster CG8486-PC,
            isoform C protein.
          Length = 2682

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 18/71 (25%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
 Frame = +1

Query: 82   YQRLQQYYEYPDRNFEDVYFDLMDIDIVP--YGQPFDCTMNIQNKSHEDRTIWCVLTASS 255
            +++++   EY  +NF+DV++  +++ I+   Y   F C+++     H     +CVL A+S
Sbjct: 856  FRKIKNKSEYIFKNFKDVFWRFLELHIMKAVYIAAFVCSVSEVCVLHIIFVGFCVLGATS 915

Query: 256  CYYTGAIASRV 288
                  + SR+
Sbjct: 916  RKAVQVVISRL 926


>AE014134-1415|AAN11153.1| 2720|Drosophila melanogaster CG8486-PB,
            isoform B protein.
          Length = 2720

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 18/71 (25%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
 Frame = +1

Query: 82   YQRLQQYYEYPDRNFEDVYFDLMDIDIVP--YGQPFDCTMNIQNKSHEDRTIWCVLTASS 255
            +++++   EY  +NF+DV++  +++ I+   Y   F C+++     H     +CVL A+S
Sbjct: 856  FRKIKNKSEYIFKNFKDVFWRFLELHIMKAVYIAAFVCSVSEVCVLHIIFVGFCVLGATS 915

Query: 256  CYYTGAIASRV 288
                  + SR+
Sbjct: 916  RKAVQVVISRL 926


>AE014134-1414|AAF52611.1| 2771|Drosophila melanogaster CG8486-PA,
            isoform A protein.
          Length = 2771

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 18/71 (25%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
 Frame = +1

Query: 82   YQRLQQYYEYPDRNFEDVYFDLMDIDIVP--YGQPFDCTMNIQNKSHEDRTIWCVLTASS 255
            +++++   EY  +NF+DV++  +++ I+   Y   F C+++     H     +CVL A+S
Sbjct: 856  FRKIKNKSEYIFKNFKDVFWRFLELHIMKAVYIAAFVCSVSEVCVLHIIFVGFCVLGATS 915

Query: 256  CYYTGAIASRV 288
                  + SR+
Sbjct: 916  RKAVQVVISRL 926


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,601,885
Number of Sequences: 53049
Number of extensions: 850153
Number of successful extensions: 2383
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2377
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)