Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6118
         (648 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-P...   410   e-115
AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-P...   410   e-115
U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog pro...   409   e-114
AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p pro...   409   e-114
BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p pro...   200   2e-51
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    29   7.2  
BT021330-1|AAX33478.1| 1041|Drosophila melanogaster RE04229p pro...    28   9.5  
BT011380-1|AAR96172.1| 1233|Drosophila melanogaster LP07472p pro...    28   9.5  
AY047535-1|AAK77267.1|  640|Drosophila melanogaster GH04440p pro...    28   9.5  
AE014134-531|AAF51167.1| 1041|Drosophila melanogaster CG3558-PA,...    28   9.5  
AE013599-782|AAF58990.2| 1233|Drosophila melanogaster CG8777-PA ...    28   9.5  

>AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-PA,
           isoform A protein.
          Length = 231

 Score =  410 bits (1010), Expect = e-115
 Identities = 185/204 (90%), Positives = 196/204 (96%)
 Frame = +3

Query: 15  ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYE 194
           + MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+A V+DFPLCVHLVSDEYE
Sbjct: 12  VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 71

Query: 195 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 374
           QLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA
Sbjct: 72  QLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 131

Query: 375 FGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 554
           FGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER
Sbjct: 132 FGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 191

Query: 555 DEFEKLREEGRLANDGCIVQYRPE 626
           + +E+LR++ RL  DGC V+YRPE
Sbjct: 192 ERYEELRDDNRLEPDGCNVKYRPE 215


>AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-PB,
           isoform B protein.
          Length = 237

 Score =  410 bits (1010), Expect = e-115
 Identities = 185/204 (90%), Positives = 196/204 (96%)
 Frame = +3

Query: 15  ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYE 194
           + MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+A V+DFPLCVHLVSDEYE
Sbjct: 18  VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 77

Query: 195 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 374
           QLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA
Sbjct: 78  QLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 137

Query: 375 FGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 554
           FGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER
Sbjct: 138 FGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 197

Query: 555 DEFEKLREEGRLANDGCIVQYRPE 626
           + +E+LR++ RL  DGC V+YRPE
Sbjct: 198 ERYEELRDDNRLEPDGCNVKYRPE 221


>U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog
           protein.
          Length = 218

 Score =  409 bits (1008), Expect = e-114
 Identities = 185/202 (91%), Positives = 195/202 (96%)
 Frame = +3

Query: 21  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYEQL 200
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+A V+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 201 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 380
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 381 KPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDE 560
           KPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ 
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERER 180

Query: 561 FEKLREEGRLANDGCIVQYRPE 626
           +E+LR++ RL  DGC V+YRPE
Sbjct: 181 YEELRDDNRLEPDGCNVKYRPE 202


>AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p
           protein.
          Length = 218

 Score =  409 bits (1008), Expect = e-114
 Identities = 185/202 (91%), Positives = 195/202 (96%)
 Frame = +3

Query: 21  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYEQL 200
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+A V+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 201 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 380
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 381 KPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDE 560
           KPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ 
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERER 180

Query: 561 FEKLREEGRLANDGCIVQYRPE 626
           +E+LR++ RL  DGC V+YRPE
Sbjct: 181 YEELRDDNRLEPDGCNVKYRPE 202


>BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p
           protein.
          Length = 197

 Score =  200 bits (487), Expect = 2e-51
 Identities = 118/206 (57%), Positives = 135/206 (65%), Gaps = 2/206 (0%)
 Frame = +3

Query: 15  ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYE 194
           + MGRRPARCYRY           C+  P PK R F  G     +  F L          
Sbjct: 5   VEMGRRPARCYRY-----------CKNKPYPKSR-FCRGVPDPKIRIFDL---------- 42

Query: 195 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRI--NKMLSCAGADRLQTGMR 368
                 +E   +C   +LV     D++  ++        RI  NKMLSCAGADRLQTGMR
Sbjct: 43  GRKKATVEDFPLCV--HLVS----DEYE-QLSSEALEAGRICCNKMLSCAGADRLQTGMR 95

Query: 369 GAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKY 548
           GAFGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKY
Sbjct: 96  GAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKY 155

Query: 549 ERDEFEKLREEGRLANDGCIVQYRPE 626
           ER+ +E+LR++ RL  DGC V+YRPE
Sbjct: 156 ERERYEELRDDNRLEPDGCNVKYRPE 181


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -1

Query: 219 PPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPDRTS 79
           PPK  S+    +RTP+         + S+   R   SWD V+  R S
Sbjct: 544 PPKKESAQSAAKRTPADSVFTKATANTSARKPRASDSWDYVYKQRAS 590


>BT021330-1|AAX33478.1| 1041|Drosophila melanogaster RE04229p
           protein.
          Length = 1041

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +1

Query: 478 AVPSSSSPDVKRSTYQRSGVSQSMNVMSLRSCVKRAASPMTAASCST 618
           A P+S+    KRS  +R  +S+S+  M  R     + +P   +S S+
Sbjct: 833 ATPTSAYDPFKRSDNKRRSISKSITSMFSRKSASTSTAPPNGSSASS 879


>BT011380-1|AAR96172.1| 1233|Drosophila melanogaster LP07472p protein.
          Length = 1233

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 3    HFVKITMGRRPARCYRYCKNKPYPKSRFCRGV 98
            H++ I  G R A CY   + + +P SR  R V
Sbjct: 1112 HYILINEGARRALCYLQTRIRMFPNSRSLRSV 1143


>AY047535-1|AAK77267.1|  640|Drosophila melanogaster GH04440p
           protein.
          Length = 640

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 3   HFVKITMGRRPARCYRYCKNKPYPKSRFCRGV 98
           H++ I  G R A CY   + + +P SR  R V
Sbjct: 519 HYILINEGARRALCYLQTRIRMFPNSRSLRSV 550


>AE014134-531|AAF51167.1| 1041|Drosophila melanogaster CG3558-PA,
           isoform A protein.
          Length = 1041

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +1

Query: 478 AVPSSSSPDVKRSTYQRSGVSQSMNVMSLRSCVKRAASPMTAASCST 618
           A P+S+    KRS  +R  +S+S+  M  R     + +P   +S S+
Sbjct: 833 ATPTSAYDPFKRSDNKRRSISKSITSMFSRKSASTSTAPPNGSSASS 879


>AE013599-782|AAF58990.2| 1233|Drosophila melanogaster CG8777-PA
            protein.
          Length = 1233

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 3    HFVKITMGRRPARCYRYCKNKPYPKSRFCRGV 98
            H++ I  G R A CY   + + +P SR  R V
Sbjct: 1112 HYILINEGARRALCYLQTRIRMFPNSRSLRSV 1143


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,753,982
Number of Sequences: 53049
Number of extensions: 780498
Number of successful extensions: 2522
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2521
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)