Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6112
(544 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393 80 1e-15
03_06_0480 + 34218403-34218405,34219071-34219127,34220047-342203... 73 1e-13
05_01_0103 + 686770-687017,687120-687270 72 3e-13
07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318 70 1e-12
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477... 67 1e-11
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 66 1e-11
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666 65 4e-11
03_06_0479 + 34217170-34217172,34217337-34217786 58 5e-09
10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378 51 7e-07
07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084 38 0.005
07_03_0356 - 17142019-17142899,17145251-17145290,17145381-171455... 29 3.2
04_04_1571 + 34504087-34504421,34505002-34505731,34506091-345120... 29 3.2
12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,165... 27 7.3
06_01_1066 - 8656108-8657622 27 7.3
05_07_0055 - 27374028-27374080,27374205-27374295,27374930-273754... 27 7.3
12_01_0906 + 8799284-8799441,8800865-8801690,8801933-8802055,880... 27 9.7
06_03_1458 + 30301585-30301775,30302131-30302245,30302345-303024... 27 9.7
05_01_0489 - 4077365-4077502,4078105-4078227,4079019-4079135,407... 27 9.7
03_02_0910 + 12317493-12317960,12319678-12319734,12320592-123206... 27 9.7
>02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393
Length = 158
Score = 79.8 bits (188), Expect = 1e-15
Identities = 37/79 (46%), Positives = 52/79 (65%)
Frame = +1
Query: 271 ECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTDKVKKKMLYSSSFDALKKSLVGVQ 450
ECRY +FDF++ T E +K K+F +SW PDT +V+ KMLY+SS D K+ L G+Q
Sbjct: 83 ECRYAVFDFDFV-----TDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQ 137
Query: 451 KYIQATDLSEASQEAVEEK 507
+QATD SE S + V+ +
Sbjct: 138 VELQATDPSEMSMDIVKSR 156
>03_06_0480 +
34218403-34218405,34219071-34219127,34220047-34220312,
34220402-34220552
Length = 158
Score = 72.9 bits (171), Expect = 1e-13
Identities = 35/95 (36%), Positives = 57/95 (60%)
Frame = +1
Query: 229 TNSSSRICSKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTDKVKKKMLYS 408
T S S G+CR+ ++DF++ T+E K ++F + W PD KV+ KMLY+
Sbjct: 69 TTSYEDFTSSLPEGDCRFAIYDFDFL-----TAEDVPKSRIFYILWSPDNAKVRSKMLYA 123
Query: 409 SSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLR 513
SS + KK L G+Q +QATD E S +A++++++
Sbjct: 124 SSNERFKKELNGIQLEVQATDAGEISLDALKDRVK 158
Score = 44.0 bits (99), Expect = 8e-05
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 84 ASGVTVSDACKTTY*GRSSKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQQG 260
+SGV + D CK + SK + HR++ F + ++ K+I V+ +G+R YE F L +G
Sbjct: 24 SSGVAIHDDCKLKFNELQSK-RMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPEG 82
Query: 261 RYR 269
R
Sbjct: 83 DCR 85
>05_01_0103 + 686770-687017,687120-687270
Length = 132
Score = 72.1 bits (169), Expect = 3e-13
Identities = 31/76 (40%), Positives = 49/76 (64%)
Frame = +1
Query: 271 ECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTDKVKKKMLYSSSFDALKKSLVGVQ 450
ECRY +FD+++ T E +K K+F ++W PDT +V+ KM+Y+SS D K+ L G+Q
Sbjct: 57 ECRYAIFDYDFV-----TEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQ 111
Query: 451 KYIQATDLSEASQEAV 498
+QATD +E + +
Sbjct: 112 VELQATDPTEVGLDVI 127
>07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318
Length = 145
Score = 70.1 bits (164), Expect = 1e-12
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +1
Query: 271 ECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTDKVKKKMLYSSSFDALKKSLVGVQ 450
ECRY ++D ++ T E +K K+F SW PDT + + KMLY+SS D ++ L G+Q
Sbjct: 70 ECRYAVYDLDFV-----TDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQ 124
Query: 451 KYIQATDLSEASQEAVEEK 507
IQATD SE S + + +
Sbjct: 125 CEIQATDPSEMSLDIIRAR 143
>03_06_0174 -
32141956-32141985,32143658-32144452,32147645-32147759,
32148134-32148399,32150193-32150213
Length = 408
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/73 (42%), Positives = 46/73 (63%)
Frame = +1
Query: 271 ECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTDKVKKKMLYSSSFDALKKSLVGVQ 450
+CRY L+DF++ T E +K K+F ++W P T +++ KMLYS+S D +K+ L G
Sbjct: 70 DCRYALYDFDFV-----TGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFH 124
Query: 451 KYIQATDLSEASQ 489
IQATD +E Q
Sbjct: 125 YEIQATDPTETPQ 137
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 66.5 bits (155), Expect = 1e-11
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = +1
Query: 271 ECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTDKVKKKMLYSSSFDALKKSLVGVQ 450
ECRY +FDF++ T E +K K+F +SW PDT KV+ KMLY+SS D K+ L G+Q
Sbjct: 328 ECRYAVFDFDFV-----TDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQ 382
>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
Length = 145
Score = 64.9 bits (151), Expect = 4e-11
Identities = 29/79 (36%), Positives = 48/79 (60%)
Frame = +1
Query: 271 ECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTDKVKKKMLYSSSFDALKKSLVGVQ 450
+CRY ++DF++ T E +K K+F ++W P +++ KMLY++S + ++ L GV
Sbjct: 70 DCRYAIYDFDFV-----TEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVH 124
Query: 451 KYIQATDLSEASQEAVEEK 507
IQATD SE E + E+
Sbjct: 125 YEIQATDPSELDIELLRER 143
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 84 ASGVTVSDACKTTY*GRSSKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQQG 260
+SG+ V+ CK T+ K K HRYV+F I D+ K++ VE G ++ F++ L +
Sbjct: 11 SSGIGVAAECKQTFLELQRK-KSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPES 69
Query: 261 RYR 269
R
Sbjct: 70 DCR 72
>03_06_0479 + 34217170-34217172,34217337-34217786
Length = 150
Score = 58.0 bits (134), Expect = 5e-09
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Frame = +1
Query: 274 CRYGLFDFEYT-HQCQGTSEASK-----KQKLFLMSWCPDTDKVKKKMLYSSSFDALKKS 435
CRY ++D ++T T+ A + + K+F +SW P V+ KM+Y+SS + KK
Sbjct: 65 CRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEGFKKE 124
Query: 436 LVGVQKYIQATDLSEASQEAVEE 504
L GVQ +QATD SE + + +++
Sbjct: 125 LDGVQIDLQATDPSELTLDVLKD 147
>10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378
Length = 153
Score = 50.8 bits (116), Expect = 7e-07
Identities = 23/83 (27%), Positives = 43/83 (51%)
Frame = +1
Query: 271 ECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTDKVKKKMLYSSSFDALKKSLVGVQ 450
+CRY ++D ++ + + +K K+F +SW P +++ K +Y+ S + + L GV
Sbjct: 76 DCRYAVYDLDFV-----SDDNCRKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVH 130
Query: 451 KYIQATDLSEASQEAVEEKLRAT 519
IQATD + E + + T
Sbjct: 131 FEIQATDPDDMDLEVLRGRANRT 153
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 147 KKHRYVVFYIRDEK-QIDVETVGERNAEYEQFLEDL 251
K HRYV+F I D + +I VE G Y+ F L
Sbjct: 37 KVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASL 72
>07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084
Length = 169
Score = 37.9 bits (84), Expect = 0.005
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +1
Query: 337 KKQKLFLMSWCPDTDKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLRA 516
+K K+F +SW P ++ K +Y+ + + L GV IQATD + E + +
Sbjct: 109 RKSKIFFISWSPSLSCIRAKTIYAVWRNQFRHELDGVHFEIQATDPDDMDLEVLRGRANR 168
Query: 517 T 519
T
Sbjct: 169 T 169
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 147 KKHRYVVFYIRDEK-QIDVETVGERNAEYEQFLEDL 251
K HRYV+F I D + +I VE G Y+ F L
Sbjct: 57 KVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASL 92
>07_03_0356 -
17142019-17142899,17145251-17145290,17145381-17145512,
17145762-17145815,17145913-17145993,17146860-17146955,
17147439-17147611,17147750-17147823,17148515-17148622,
17148693-17148868,17149305-17149352,17150665-17150775,
17152172-17152226,17153434-17153534,17154176-17154290,
17155505-17155698
Length = 812
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 423 SEKVPCRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSI 539
+E R E P R G+ +GGRRR+A +R + I
Sbjct: 5 AESCGSRGGESPPPPRTRGASAGGRRRKAEAYREVLRRI 43
>04_04_1571 + 34504087-34504421,34505002-34505731,34506091-34512077,
34512493-34513964,34514114-34514377,34514761-34514978,
34515759-34516030,34516190-34516559,34516578-34516797,
34516819-34518931,34518941-34519193,34519269-34519401,
34520597-34521114,34521207-34522115,34522195-34522368,
34522833-34522882,34523963-34524035,34524413-34524477,
34524736-34525522,34525622-34525878,34525989-34526109,
34526315-34526956
Length = 5320
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 337 KKQKLFLMSWCPDT-DKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQ 489
K++ + S C T DK+K+K+L S DAL+ ++GV + + + +Q
Sbjct: 4300 KEELKMVNSICSVTLDKIKEKLLSKSLQDALRIVMIGVSNHFPSFEALNLAQ 4351
>12_01_0220 -
1657554-1657620,1657943-1658109,1658110-1658267,
1658362-1658447,1658559-1658808,1659194-1660320,
1662207-1662351,1663555-1663696,1663775-1663828,
1663914-1663985,1664710-1664778,1664885-1664926,
1665024-1665092,1665257-1665394,1665518-1665628,
1665704-1665836,1666834-1666889,1667191-1667901
Length = 1198
Score = 27.5 bits (58), Expect = 7.3
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 311 WCVYSKSNRPYLHSPVPPLLQILEE 237
WC ++ R HSP P+L +L E
Sbjct: 569 WCTVNQQGRANAHSPPSPILLLLVE 593
>06_01_1066 - 8656108-8657622
Length = 504
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -2
Query: 144 PYLIYLSKWSCKRPKLSHQTPFFDVI-HVKITP 49
P+ +YL ++C RP+ S++ PF H +++P
Sbjct: 84 PHSVYLVDYACFRPQPSNRLPFATFAEHFRLSP 116
>05_07_0055 -
27374028-27374080,27374205-27374295,27374930-27375448,
27375544-27375779,27376363-27376846,27376993-27378282
Length = 890
Score = 27.5 bits (58), Expect = 7.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 129 LSKWSCKRPKLSHQTP 82
L +W C RPK H TP
Sbjct: 54 LEEWQCARPKTRHPTP 69
>12_01_0906 +
8799284-8799441,8800865-8801690,8801933-8802055,
8802144-8802210,8802611-8802714,8802798-8802900,
8803103-8803401,8804009-8804263,8805471-8805776,
8805866-8806194,8806829-8806916,8807027-8807164,
8807438-8807458
Length = 938
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 412 SFDALKKSLVGVQKYIQATDLSEASQEAVEEKL 510
S+DALKKS+ G+ + AT++ E E L
Sbjct: 236 SWDALKKSINGLVNKVNATNIKNIVPELFAENL 268
>06_03_1458 +
30301585-30301775,30302131-30302245,30302345-30302430,
30302552-30302662,30303154-30303208,30303327-30303437,
30304347-30304403,30304847-30305016,30305103-30305210,
30305643-30305716,30305757-30305779,30306188-30306283,
30306502-30306582,30306934-30307068,30307162-30307227,
30307283-30307297
Length = 497
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 340 SC*PPTCPGTGACIQSQTGHICIPR 266
SC PP G + I SQ H+ IP+
Sbjct: 248 SCWPPELAGKQSLINSQVNHVQIPK 272
>05_01_0489 -
4077365-4077502,4078105-4078227,4079019-4079135,
4079243-4079263
Length = 132
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 135 SSKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQQG 260
SS D + F+I++EKQ+D + VG E E+ ++ L G
Sbjct: 91 SSWDIRATPTFFFIKNEKQVD-KLVGANKPELEKKVQALADG 131
>03_02_0910 + 12317493-12317960,12319678-12319734,12320592-12320666,
12321219-12321299,12321472-12321546,12321818-12321862,
12321975-12322064,12322153-12322254,12322366-12322420,
12324966-12325027,12325521-12325555,12325877-12326115,
12326219-12328035
Length = 1066
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 235 SSSRICSKGGTGE-CRYGLFDFEYTHQCQGTSEA-SKKQKLFLMSWCPDTDKVKKKMLYS 408
+ ++ S G GE C+Y D+E HQ G ++ S ++ ++S+ + ++ + +
Sbjct: 914 AKKKLQSPSGDGEECQYSTDDYE-IHQAAGDADPFSYSEEYGVISYSTEEEQQPLHVSRN 972
Query: 409 SSFDAL 426
SSFD +
Sbjct: 973 SSFDTV 978
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,430,251
Number of Sequences: 37544
Number of extensions: 260336
Number of successful extensions: 951
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1210221432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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