Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6097
(575 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF091824-1|ABK78776.1| 1437|Homo sapiens mucin 4 protein. 32 1.7
AJ400858-1|CAC14143.1| 2167|Homo sapiens MUC4 protein splice var... 32 1.7
AJ400857-1|CAC14142.1| 1827|Homo sapiens MUC4 protein splice var... 32 1.7
AJ400856-1|CAC14141.1| 1256|Homo sapiens MUC4 protein splice var... 32 1.7
AJ400855-1|CAC14140.1| 1215|Homo sapiens MUC4 protein splice var... 32 1.7
AJ400854-1|CAC14139.1| 1214|Homo sapiens MUC4 protein splice var... 32 1.7
AJ400853-1|CAC14138.1| 1201|Homo sapiens MUC4 protein splice var... 32 1.7
AJ400852-1|CAC14137.1| 1199|Homo sapiens MUC4 protein splice var... 32 1.7
AJ400851-1|CAC14136.1| 1187|Homo sapiens MUC4 protein splice var... 32 1.7
AJ400850-1|CAC14135.1| 1157|Homo sapiens MUC4 protein splice var... 32 1.7
AJ400849-1|CAC14134.1| 1157|Homo sapiens MUC4 protein splice var... 32 1.7
AJ400633-1|CAC10062.1| 1187|Homo sapiens MUC4 protein variant VI... 32 1.7
AJ277505-1|CAC14585.1| 1107|Homo sapiens MUC4 protein splice var... 32 1.7
AJ277412-1|CAC10061.1| 2117|Homo sapiens mucin 4, variant V3 pro... 32 1.7
AJ276359-1|CAB81773.1| 2169|Homo sapiens mucin 4 protein. 32 1.7
AJ000281-1|CAA03985.1| 1045|Homo sapiens mucin protein. 32 1.7
AF522055-1|AAM66747.1| 2169|Homo sapiens MUC4 protein. 32 1.7
AF058803-1|AAC34750.1| 944|Homo sapiens mucin 4 protein. 32 1.7
>EF091824-1|ABK78776.1| 1437|Homo sapiens mucin 4 protein.
Length = 1437
Score = 31.9 bits (69), Expect = 1.7
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
Frame = +3
Query: 99 ASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLHKQ 278
+SV + P+ ++ E + P F +T FS ++ S+
Sbjct: 286 SSVPVTGSLMPVTSAALVTVDPEGQSPATFSRTSTQDTT--AFSKNHQT-----QSVETT 338
Query: 279 NLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKSIAVTFATHS- 455
+ N N TPV +T P GFNP ++ +T+++ S++ TF S
Sbjct: 339 RVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSSVSNTFLVTSK 397
Query: 456 ---IPYSKTSYLSDT 491
+P S+ S L +T
Sbjct: 398 VFRMPISRDSTLGNT 412
>AJ400858-1|CAC14143.1| 2167|Homo sapiens MUC4 protein splice
variant sv21 protein.
Length = 2167
Score = 31.9 bits (69), Expect = 1.7
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
Frame = +3
Query: 99 ASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLHKQ 278
+SV + P+ ++ E + P F +T FS ++ S+
Sbjct: 286 SSVPVTGSLMPVTSAALVTVDPEGQSPATFSRTSTQDTT--AFSKNHQT-----QSVETT 338
Query: 279 NLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKSIAVTFATHS- 455
+ N N TPV +T P GFNP ++ +T+++ S++ TF S
Sbjct: 339 RVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSSVSNTFLVTSK 397
Query: 456 ---IPYSKTSYLSDT 491
+P S+ S L +T
Sbjct: 398 VFRMPISRDSTLGNT 412
>AJ400857-1|CAC14142.1| 1827|Homo sapiens MUC4 protein splice
variant sv20 protein.
Length = 1827
Score = 31.9 bits (69), Expect = 1.7
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
Frame = +3
Query: 99 ASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLHKQ 278
+SV + P+ ++ E + P F +T FS ++ S+
Sbjct: 286 SSVPVTGSLMPVTSAALVTVDPEGQSPATFSRTSTQDTT--AFSKNHQT-----QSVETT 338
Query: 279 NLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKSIAVTFATHS- 455
+ N N TPV +T P GFNP ++ +T+++ S++ TF S
Sbjct: 339 RVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSSVSNTFLVTSK 397
Query: 456 ---IPYSKTSYLSDT 491
+P S+ S L +T
Sbjct: 398 VFRMPISRDSTLGNT 412
>AJ400856-1|CAC14141.1| 1256|Homo sapiens MUC4 protein splice
variant sv19 protein.
Length = 1256
Score = 31.9 bits (69), Expect = 1.7
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
Frame = +3
Query: 99 ASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLHKQ 278
+SV + P+ ++ E + P F +T FS ++ S+
Sbjct: 286 SSVPVTGSLMPVTSAALVTVDPEGQSPATFSRTSTQDTT--AFSKNHQT-----QSVETT 338
Query: 279 NLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKSIAVTFATHS- 455
+ N N TPV +T P GFNP ++ +T+++ S++ TF S
Sbjct: 339 RVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSSVSNTFLVTSK 397
Query: 456 ---IPYSKTSYLSDT 491
+P S+ S L +T
Sbjct: 398 VFRMPISRDSTLGNT 412
>AJ400855-1|CAC14140.1| 1215|Homo sapiens MUC4 protein splice
variant sv18 protein.
Length = 1215
Score = 31.9 bits (69), Expect = 1.7
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
Frame = +3
Query: 99 ASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLHKQ 278
+SV + P+ ++ E + P F +T FS ++ S+
Sbjct: 286 SSVPVTGSLMPVTSAALVTVDPEGQSPATFSRTSTQDTT--AFSKNHQT-----QSVETT 338
Query: 279 NLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKSIAVTFATHS- 455
+ N N TPV +T P GFNP ++ +T+++ S++ TF S
Sbjct: 339 RVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSSVSNTFLVTSK 397
Query: 456 ---IPYSKTSYLSDT 491
+P S+ S L +T
Sbjct: 398 VFRMPISRDSTLGNT 412
>AJ400854-1|CAC14139.1| 1214|Homo sapiens MUC4 protein splice
variant sv17 protein.
Length = 1214
Score = 31.9 bits (69), Expect = 1.7
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
Frame = +3
Query: 99 ASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLHKQ 278
+SV + P+ ++ E + P F +T FS ++ S+
Sbjct: 286 SSVPVTGSLMPVTSAALVTVDPEGQSPATFSRTSTQDTT--AFSKNHQT-----QSVETT 338
Query: 279 NLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKSIAVTFATHS- 455
+ N N TPV +T P GFNP ++ +T+++ S++ TF S
Sbjct: 339 RVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSSVSNTFLVTSK 397
Query: 456 ---IPYSKTSYLSDT 491
+P S+ S L +T
Sbjct: 398 VFRMPISRDSTLGNT 412
>AJ400853-1|CAC14138.1| 1201|Homo sapiens MUC4 protein splice
variant sv16 protein.
Length = 1201
Score = 31.9 bits (69), Expect = 1.7
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
Frame = +3
Query: 99 ASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLHKQ 278
+SV + P+ ++ E + P F +T FS ++ S+
Sbjct: 286 SSVPVTGSLMPVTSAALVTVDPEGQSPATFSRTSTQDTT--AFSKNHQT-----QSVETT 338
Query: 279 NLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKSIAVTFATHS- 455
+ N N TPV +T P GFNP ++ +T+++ S++ TF S
Sbjct: 339 RVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSSVSNTFLVTSK 397
Query: 456 ---IPYSKTSYLSDT 491
+P S+ S L +T
Sbjct: 398 VFRMPISRDSTLGNT 412
>AJ400852-1|CAC14137.1| 1199|Homo sapiens MUC4 protein splice
variant sv15 protein.
Length = 1199
Score = 31.9 bits (69), Expect = 1.7
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
Frame = +3
Query: 99 ASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLHKQ 278
+SV + P+ ++ E + P F +T FS ++ S+
Sbjct: 286 SSVPVTGSLMPVTSAALVTVDPEGQSPATFSRTSTQDTT--AFSKNHQT-----QSVETT 338
Query: 279 NLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKSIAVTFATHS- 455
+ N N TPV +T P GFNP ++ +T+++ S++ TF S
Sbjct: 339 RVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSSVSNTFLVTSK 397
Query: 456 ---IPYSKTSYLSDT 491
+P S+ S L +T
Sbjct: 398 VFRMPISRDSTLGNT 412
>AJ400851-1|CAC14136.1| 1187|Homo sapiens MUC4 protein splice
variant sv14 protein.
Length = 1187
Score = 31.9 bits (69), Expect = 1.7
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
Frame = +3
Query: 99 ASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLHKQ 278
+SV + P+ ++ E + P F +T FS ++ S+
Sbjct: 286 SSVPVTGSLMPVTSAALVTVDPEGQSPATFSRTSTQDTT--AFSKNHQT-----QSVETT 338
Query: 279 NLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKSIAVTFATHS- 455
+ N N TPV +T P GFNP ++ +T+++ S++ TF S
Sbjct: 339 RVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSSVSNTFLVTSK 397
Query: 456 ---IPYSKTSYLSDT 491
+P S+ S L +T
Sbjct: 398 VFRMPISRDSTLGNT 412
>AJ400850-1|CAC14135.1| 1157|Homo sapiens MUC4 protein splice
variant sv13 protein.
Length = 1157
Score = 31.9 bits (69), Expect = 1.7
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
Frame = +3
Query: 99 ASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLHKQ 278
+SV + P+ ++ E + P F +T FS ++ S+
Sbjct: 286 SSVPVTGSLMPVTSAALVTVDPEGQSPATFSRTSTQDTT--AFSKNHQT-----QSVETT 338
Query: 279 NLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKSIAVTFATHS- 455
+ N N TPV +T P GFNP ++ +T+++ S++ TF S
Sbjct: 339 RVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSSVSNTFLVTSK 397
Query: 456 ---IPYSKTSYLSDT 491
+P S+ S L +T
Sbjct: 398 VFRMPISRDSTLGNT 412
>AJ400849-1|CAC14134.1| 1157|Homo sapiens MUC4 protein splice
variant sv12 protein.
Length = 1157
Score = 31.9 bits (69), Expect = 1.7
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
Frame = +3
Query: 99 ASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLHKQ 278
+SV + P+ ++ E + P F +T FS ++ S+
Sbjct: 286 SSVPVTGSLMPVTSAALVTVDPEGQSPATFSRTSTQDTT--AFSKNHQT-----QSVETT 338
Query: 279 NLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKSIAVTFATHS- 455
+ N N TPV +T P GFNP ++ +T+++ S++ TF S
Sbjct: 339 RVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSSVSNTFLVTSK 397
Query: 456 ---IPYSKTSYLSDT 491
+P S+ S L +T
Sbjct: 398 VFRMPISRDSTLGNT 412
>AJ400633-1|CAC10062.1| 1187|Homo sapiens MUC4 protein variant VI1
protein.
Length = 1187
Score = 31.9 bits (69), Expect = 1.7
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
Frame = +3
Query: 99 ASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLHKQ 278
+SV + P+ ++ E + P F +T FS ++ S+
Sbjct: 286 SSVPVTGSLMPVTSAALVTVDPEGQSPATFSRTSTQDTT--AFSKNHQT-----QSVETT 338
Query: 279 NLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKSIAVTFATHS- 455
+ N N TPV +T P GFNP ++ +T+++ S++ TF S
Sbjct: 339 RVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSSVSNTFLVTSK 397
Query: 456 ---IPYSKTSYLSDT 491
+P S+ S L +T
Sbjct: 398 VFRMPISRDSTLGNT 412
>AJ277505-1|CAC14585.1| 1107|Homo sapiens MUC4 protein splice
variant sv11 protein.
Length = 1107
Score = 31.9 bits (69), Expect = 1.7
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
Frame = +3
Query: 99 ASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLHKQ 278
+SV + P+ ++ E + P F +T FS ++ S+
Sbjct: 286 SSVPVTGSLMPVTSAALVTVDPEGQSPATFSRTSTQDTT--AFSKNHQT-----QSVETT 338
Query: 279 NLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKSIAVTFATHS- 455
+ N N TPV +T P GFNP ++ +T+++ S++ TF S
Sbjct: 339 RVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSSVSNTFLVTSK 397
Query: 456 ---IPYSKTSYLSDT 491
+P S+ S L +T
Sbjct: 398 VFRMPISRDSTLGNT 412
>AJ277412-1|CAC10061.1| 2117|Homo sapiens mucin 4, variant V3
protein.
Length = 2117
Score = 31.9 bits (69), Expect = 1.7
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
Frame = +3
Query: 99 ASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLHKQ 278
+SV + P+ ++ E + P F +T FS ++ S+
Sbjct: 286 SSVPVTGSLMPVTSAALVTVDPEGQSPATFSRTSTQDTT--AFSKNHQT-----QSVETT 338
Query: 279 NLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKSIAVTFATHS- 455
+ N N TPV +T P GFNP ++ +T+++ S++ TF S
Sbjct: 339 RVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSSVSNTFLVTSK 397
Query: 456 ---IPYSKTSYLSDT 491
+P S+ S L +T
Sbjct: 398 VFRMPISRDSTLGNT 412
>AJ276359-1|CAB81773.1| 2169|Homo sapiens mucin 4 protein.
Length = 2169
Score = 31.9 bits (69), Expect = 1.7
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
Frame = +3
Query: 99 ASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLHKQ 278
+SV + P+ ++ E + P F +T FS ++ S+
Sbjct: 286 SSVPVTGSLMPVTSAALVTVDPEGQSPATFSRTSTQDTT--AFSKNHQT-----QSVETT 338
Query: 279 NLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKSIAVTFATHS- 455
+ N N TPV +T P GFNP ++ +T+++ S++ TF S
Sbjct: 339 RVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSSVSNTFLVTSK 397
Query: 456 ---IPYSKTSYLSDT 491
+P S+ S L +T
Sbjct: 398 VFRMPISRDSTLGNT 412
>AJ000281-1|CAA03985.1| 1045|Homo sapiens mucin protein.
Length = 1045
Score = 31.9 bits (69), Expect = 1.7
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
Frame = +3
Query: 99 ASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLHKQ 278
+SV + P+ ++ E + P F +T FS ++ S+
Sbjct: 286 SSVPVTGSLMPVTSAALVTVDPEGQSPATFSRTSTQDTT--AFSKNHQT-----QSVETT 338
Query: 279 NLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKSIAVTFATHS- 455
+ N N TPV +T P GFNP ++ +T+++ S++ TF S
Sbjct: 339 RVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSSVSNTFLVTSK 397
Query: 456 ---IPYSKTSYLSDT 491
+P S+ S L +T
Sbjct: 398 VFRMPISRDSTLGNT 412
>AF522055-1|AAM66747.1| 2169|Homo sapiens MUC4 protein.
Length = 2169
Score = 31.9 bits (69), Expect = 1.7
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
Frame = +3
Query: 99 ASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLHKQ 278
+SV + P+ ++ E + P F +T FS ++ S+
Sbjct: 286 SSVPVTGSLMPVTSAALVTVDPEGQSPATFSRTSTQDTT--AFSKNHQT-----QSVETT 338
Query: 279 NLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKSIAVTFATHS- 455
+ N N TPV +T P GFNP ++ +T+++ S++ TF S
Sbjct: 339 RVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSSVSNTFLVTSK 397
Query: 456 ---IPYSKTSYLSDT 491
+P S+ S L +T
Sbjct: 398 VFRMPISRDSTLGNT 412
>AF058803-1|AAC34750.1| 944|Homo sapiens mucin 4 protein.
Length = 944
Score = 31.9 bits (69), Expect = 1.7
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
Frame = +3
Query: 99 ASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLHKQ 278
+SV + P+ ++ E + P F +T FS ++ S+
Sbjct: 200 SSVPVTGSLMPVTSAALVTVDPEGQSPATFSRTSTQDTT--AFSKNHQT-----QSVETT 252
Query: 279 NLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKSIAVTFATHS- 455
+ N N TPV +T P GFNP ++ +T+++ S++ TF S
Sbjct: 253 RVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSSVSNTFLVTSK 311
Query: 456 ---IPYSKTSYLSDT 491
+P S+ S L +T
Sbjct: 312 VFRMPISRDSTLGNT 326
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,118,911
Number of Sequences: 237096
Number of extensions: 1756030
Number of successful extensions: 3504
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3501
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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