Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6094
(557 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U26717-1|AAA98549.1| 187|Drosophila melanogaster sodium channel... 29 5.6
M32078-6|AAB59190.1| 2110|Drosophila melanogaster sodium channel... 29 5.6
M32078-5|AAB59191.1| 2123|Drosophila melanogaster sodium channel... 29 5.6
M32078-4|AAB59192.1| 2077|Drosophila melanogaster sodium channel... 29 5.6
M32078-3|AAB59193.1| 2118|Drosophila melanogaster sodium channel... 29 5.6
M32078-2|AAB59194.1| 2121|Drosophila melanogaster sodium channel... 29 5.6
M32078-1|AAB59195.1| 2131|Drosophila melanogaster sodium channel... 29 5.6
AE014298-2416|ABI30986.1| 2131|Drosophila melanogaster CG9907-PC... 29 5.6
AE014298-2415|ABI30985.1| 2131|Drosophila melanogaster CG9907-PB... 29 5.6
AE014298-2414|AAF48617.2| 2131|Drosophila melanogaster CG9907-PA... 29 5.6
>U26717-1|AAA98549.1| 187|Drosophila melanogaster sodium channel
protein protein.
Length = 187
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 98 VVNCTVPDTIGHLVYSDLSNLIDPLKKENHN-YESIFHGSIG 220
+V T D HL Y+D SN + P+ +EN +++G++G
Sbjct: 20 LVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNLG 61
>M32078-6|AAB59190.1| 2110|Drosophila melanogaster sodium channel
alpha subunit protein.
Length = 2110
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 98 VVNCTVPDTIGHLVYSDLSNLIDPLKKENHN-YESIFHGSIG 220
+V T D HL Y+D SN + P+ +EN +++G++G
Sbjct: 574 LVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNLG 615
>M32078-5|AAB59191.1| 2123|Drosophila melanogaster sodium channel
alpha subunit protein.
Length = 2123
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 98 VVNCTVPDTIGHLVYSDLSNLIDPLKKENHN-YESIFHGSIG 220
+V T D HL Y+D SN + P+ +EN +++G++G
Sbjct: 595 LVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNLG 636
>M32078-4|AAB59192.1| 2077|Drosophila melanogaster sodium channel
alpha subunit protein.
Length = 2077
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 98 VVNCTVPDTIGHLVYSDLSNLIDPLKKENHN-YESIFHGSIG 220
+V T D HL Y+D SN + P+ +EN +++G++G
Sbjct: 595 LVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNLG 636
>M32078-3|AAB59193.1| 2118|Drosophila melanogaster sodium channel
alpha subunit protein.
Length = 2118
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 98 VVNCTVPDTIGHLVYSDLSNLIDPLKKENHN-YESIFHGSIG 220
+V T D HL Y+D SN + P+ +EN +++G++G
Sbjct: 595 LVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNLG 636
>M32078-2|AAB59194.1| 2121|Drosophila melanogaster sodium channel
alpha subunit protein.
Length = 2121
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 98 VVNCTVPDTIGHLVYSDLSNLIDPLKKENHN-YESIFHGSIG 220
+V T D HL Y+D SN + P+ +EN +++G++G
Sbjct: 595 LVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNLG 636
>M32078-1|AAB59195.1| 2131|Drosophila melanogaster sodium channel
alpha subunit protein.
Length = 2131
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 98 VVNCTVPDTIGHLVYSDLSNLIDPLKKENHN-YESIFHGSIG 220
+V T D HL Y+D SN + P+ +EN +++G++G
Sbjct: 595 LVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNLG 636
>AE014298-2416|ABI30986.1| 2131|Drosophila melanogaster CG9907-PC,
isoform C protein.
Length = 2131
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 98 VVNCTVPDTIGHLVYSDLSNLIDPLKKENHN-YESIFHGSIG 220
+V T D HL Y+D SN + P+ +EN +++G++G
Sbjct: 595 LVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNLG 636
>AE014298-2415|ABI30985.1| 2131|Drosophila melanogaster CG9907-PB,
isoform B protein.
Length = 2131
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 98 VVNCTVPDTIGHLVYSDLSNLIDPLKKENHN-YESIFHGSIG 220
+V T D HL Y+D SN + P+ +EN +++G++G
Sbjct: 595 LVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNLG 636
>AE014298-2414|AAF48617.2| 2131|Drosophila melanogaster CG9907-PA,
isoform A protein.
Length = 2131
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 98 VVNCTVPDTIGHLVYSDLSNLIDPLKKENHN-YESIFHGSIG 220
+V T D HL Y+D SN + P+ +EN +++G++G
Sbjct: 595 LVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNLG 636
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,636,244
Number of Sequences: 53049
Number of extensions: 369154
Number of successful extensions: 748
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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