Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6093
         (544 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029727-1|ABL75784.1|  288|Drosophila melanogaster IP17596p pro...    29   5.4  
AY094671-1|AAM11024.1| 1297|Drosophila melanogaster GH03947p pro...    29   5.4  
AE013599-1327|AAF58636.1| 1297|Drosophila melanogaster CG9005-PA...    29   5.4  
AF129420-1|AAD29408.1| 1685|Drosophila melanogaster AXO protein.       28   9.5  

>BT029727-1|ABL75784.1|  288|Drosophila melanogaster IP17596p
           protein.
          Length = 288

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -1

Query: 115 STDRNVRSKCRCSNVSCSSHYDAQLTA 35
           S + N+ + C C+N+SCSS     +T+
Sbjct: 87  SNNSNIVTNCSCNNISCSSSNTQPITS 113


>AY094671-1|AAM11024.1| 1297|Drosophila melanogaster GH03947p
           protein.
          Length = 1297

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -1

Query: 259 IKQHVTTSTNA*RGTRQRDGSRARHEPRNVINV 161
           IKQH TT++N+  G  Q DG  A+    N  NV
Sbjct: 467 IKQHTTTNSNS--GLHQEDGFSAKANVHNFPNV 497


>AE013599-1327|AAF58636.1| 1297|Drosophila melanogaster CG9005-PA
           protein.
          Length = 1297

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -1

Query: 259 IKQHVTTSTNA*RGTRQRDGSRARHEPRNVINV 161
           IKQH TT++N+  G  Q DG  A+    N  NV
Sbjct: 467 IKQHTTTNSNS--GLHQEDGFSAKANVHNFPNV 497


>AF129420-1|AAD29408.1| 1685|Drosophila melanogaster AXO protein.
          Length = 1685

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -3

Query: 128  PWMCLHGPQCAFEMSMFKCVLQFTL 54
            P  C +G QC    S FKCVLQ +L
Sbjct: 1261 PSPCRNGAQCKEFWSSFKCVLQQSL 1285


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,898,060
Number of Sequences: 53049
Number of extensions: 389239
Number of successful extensions: 961
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)