Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6091
         (822 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ486143-1|ABF50839.1| 1317|Drosophila melanogaster RhoGAP18B-PC...    29   5.8  
AE014298-2804|AAF48921.1| 1063|Drosophila melanogaster CG7502-PA...    29   5.8  
AF454351-1|AAL91725.1| 1258|Drosophila melanogaster unconvention...    29   7.7  
AF454350-1|AAL91724.1| 1278|Drosophila melanogaster unconvention...    29   7.7  
AE014297-3479|AAZ52543.1|  464|Drosophila melanogaster CG5501-PG...    29   7.7  
AE014297-3478|AAZ52542.1|  464|Drosophila melanogaster CG5501-PF...    29   7.7  
AE014297-3475|AAZ52539.1| 1288|Drosophila melanogaster CG5501-PE...    29   7.7  
AE014297-3474|AAS65205.1| 1278|Drosophila melanogaster CG5501-PD...    29   7.7  
AE014297-3473|AAS65204.1| 1258|Drosophila melanogaster CG5501-PB...    29   7.7  

>DQ486143-1|ABF50839.1| 1317|Drosophila melanogaster RhoGAP18B-PC
           protein.
          Length = 1317

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = +3

Query: 30  EGPGQRQQTEPVRRQRHVREHPVVALRTCLRLSVKCSECNTNVVSPIER 176
           EGP Q+ ++ P R      E   V LR     S KC++    +V   +R
Sbjct: 296 EGPWQQPKSVPARDPSSSAEESTVTLRRSTEESAKCADEQAKLVKDFKR 344


>AE014298-2804|AAF48921.1| 1063|Drosophila melanogaster CG7502-PA
           protein.
          Length = 1063

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = +3

Query: 30  EGPGQRQQTEPVRRQRHVREHPVVALRTCLRLSVKCSECNTNVVSPIER 176
           EGP Q+ ++ P R      E   V LR     S KC++    +V   +R
Sbjct: 296 EGPWQQPKSVPARDPSSSAEESTVTLRRSTEESAKCADEQAKLVKDFKR 344


>AF454351-1|AAL91725.1| 1258|Drosophila melanogaster unconventional
           myosin 95E isoformII protein.
          Length = 1258

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 4/29 (13%)
 Frame = +3

Query: 15  RPSPSEGPGQRQQT--EPVRRQ--RHVRE 89
           R SPS GP QR +T  E + RQ  RH+RE
Sbjct: 178 RQSPSPGPSQRSRTRAESIERQSRRHMRE 206


>AF454350-1|AAL91724.1| 1278|Drosophila melanogaster unconventional
           myosin 95E isoformI protein.
          Length = 1278

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 4/29 (13%)
 Frame = +3

Query: 15  RPSPSEGPGQRQQT--EPVRRQ--RHVRE 89
           R SPS GP QR +T  E + RQ  RH+RE
Sbjct: 178 RQSPSPGPSQRSRTRAESIERQSRRHMRE 206


>AE014297-3479|AAZ52543.1|  464|Drosophila melanogaster CG5501-PG,
           isoform G protein.
          Length = 464

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 4/29 (13%)
 Frame = +3

Query: 15  RPSPSEGPGQRQQT--EPVRRQ--RHVRE 89
           R SPS GP QR +T  E + RQ  RH+RE
Sbjct: 178 RQSPSPGPSQRSRTRAESIERQSRRHMRE 206


>AE014297-3478|AAZ52542.1|  464|Drosophila melanogaster CG5501-PF,
           isoform F protein.
          Length = 464

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 4/29 (13%)
 Frame = +3

Query: 15  RPSPSEGPGQRQQT--EPVRRQ--RHVRE 89
           R SPS GP QR +T  E + RQ  RH+RE
Sbjct: 178 RQSPSPGPSQRSRTRAESIERQSRRHMRE 206


>AE014297-3475|AAZ52539.1| 1288|Drosophila melanogaster CG5501-PE,
           isoform E protein.
          Length = 1288

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 4/29 (13%)
 Frame = +3

Query: 15  RPSPSEGPGQRQQT--EPVRRQ--RHVRE 89
           R SPS GP QR +T  E + RQ  RH+RE
Sbjct: 178 RQSPSPGPSQRSRTRAESIERQSRRHMRE 206


>AE014297-3474|AAS65205.1| 1278|Drosophila melanogaster CG5501-PD,
           isoform D protein.
          Length = 1278

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 4/29 (13%)
 Frame = +3

Query: 15  RPSPSEGPGQRQQT--EPVRRQ--RHVRE 89
           R SPS GP QR +T  E + RQ  RH+RE
Sbjct: 178 RQSPSPGPSQRSRTRAESIERQSRRHMRE 206


>AE014297-3473|AAS65204.1| 1258|Drosophila melanogaster CG5501-PB,
           isoform B protein.
          Length = 1258

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 4/29 (13%)
 Frame = +3

Query: 15  RPSPSEGPGQRQQT--EPVRRQ--RHVRE 89
           R SPS GP QR +T  E + RQ  RH+RE
Sbjct: 178 RQSPSPGPSQRSRTRAESIERQSRRHMRE 206


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,072,829
Number of Sequences: 53049
Number of extensions: 657479
Number of successful extensions: 1838
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1837
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)