Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6089
         (384 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     25   0.95 
AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...    23   2.9  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   2.9  

>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 25.0 bits (52), Expect = 0.95
 Identities = 10/42 (23%), Positives = 22/42 (52%)
 Frame = +1

Query: 28  YRSSYFQSVQQHRQRGTAAISRTPPTNVFLVSPFCFICQIFE 153
           ++++  + +Q H++ GT  +   PP    + S + F C+  E
Sbjct: 719 WKTAMAEEMQSHQENGTWELVELPPHRKAIGSKWIFNCKADE 760


>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
 Frame = -3

Query: 127 MATLKTHLLAAFVKSRPYR----VDGAVGLTGNTMIGKGACT 14
           +  L T L     K +P +    + G  G++GN  I + +CT
Sbjct: 4   LIALSTVLCVVLAKDQPRKAIVYLQGTSGVSGNVTISQPSCT 45


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +1

Query: 49  SVQQHRQRGTAAISRTPPTNVFLVSP 126
           S QQHR  G AA +  PP    L  P
Sbjct: 903 SSQQHRGPGAAAATGPPPPTHRLEQP 928


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 353,046
Number of Sequences: 2352
Number of extensions: 6739
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29501847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)