Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6088
(769 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-1185|AAF52451.1| 253|Drosophila melanogaster CG13773-P... 105 7e-23
EF058034-1|ABL84969.1| 796|Drosophila melanogaster Nup153 protein. 30 4.0
EF058033-1|ABL84968.1| 796|Drosophila melanogaster Nup153 protein. 30 4.0
EF058032-1|ABL84967.1| 796|Drosophila melanogaster Nup153 protein. 30 4.0
EF058031-1|ABL84966.1| 796|Drosophila melanogaster Nup153 protein. 30 4.0
EF058030-1|ABL84965.1| 796|Drosophila melanogaster Nup153 protein. 30 4.0
EF058029-1|ABL84964.1| 796|Drosophila melanogaster Nup153 protein. 30 4.0
EF058028-1|ABL84963.1| 796|Drosophila melanogaster Nup153 protein. 30 4.0
EF058027-1|ABL84962.1| 796|Drosophila melanogaster Nup153 protein. 30 4.0
EF058026-1|ABL84961.1| 796|Drosophila melanogaster Nup153 protein. 30 4.0
EF058025-1|ABL84960.1| 796|Drosophila melanogaster Nup153 protein. 30 4.0
EF058024-1|ABL84959.1| 796|Drosophila melanogaster Nup153 protein. 30 4.0
BT025178-1|ABE98144.1| 1883|Drosophila melanogaster LD46479p pro... 30 4.0
AE014298-2429|AAF48628.3| 1905|Drosophila melanogaster CG4453-PA... 30 4.0
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 29 7.0
BT015300-1|AAT94529.1| 433|Drosophila melanogaster AT22779p pro... 29 9.3
BT014930-1|AAT47781.1| 433|Drosophila melanogaster AT01023p pro... 29 9.3
AE014296-250|AAF47493.1| 433|Drosophila melanogaster CG9173-PA ... 29 9.3
>AE014134-1185|AAF52451.1| 253|Drosophila melanogaster CG13773-PA
protein.
Length = 253
Score = 105 bits (252), Expect = 7e-23
Identities = 57/174 (32%), Positives = 96/174 (55%), Gaps = 1/174 (0%)
Frame = +1
Query: 61 IMSKIIKFDLRELKQLANDKNSCLVVKKITQNLALQPWCLGNIKESITNLL-DYKVGKFD 237
I+ K IKF ++EL+ A+ SC+ +LA+ P+ + N K ++ LL KVG +D
Sbjct: 4 ILQKYIKFSVKELENYASSPESCVRCITTDMHLAMGPYGMANFKHALHELLIRTKVGFYD 63
Query: 238 KELNGVLVSYKNPCILQNVGTIRNDNADIHFQVQADYFIFQPYIGAKLTGLVNKKCSTHL 417
L+G+++ KN +L +R D+ +H + AD+++F+P GA L+G+V H+
Sbjct: 64 SGLDGIVLGIKNIKVLGQTAGLRADDPTMHLVINADFYVFRPKAGAILSGVVRHISRHHV 123
Query: 418 SVLVHRVFNVVIPQPTEEPGDKWIGSSVKEGQEVTFRIAALDLYGALPYIRGEL 579
S +++RVFN I + T + + + QE+ RI D+ +PYI GEL
Sbjct: 124 SAVIYRVFNTSI-RFTNQSASR---EDIAMDQEIKIRIKNFDISNLMPYIEGEL 173
>EF058034-1|ABL84969.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.9 bits (64), Expect = 4.0
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +1
Query: 394 NKKCSTHLSVLVHRVFNVVIPQPTEEPGDKWIGSSVKEGQEVTFRIAALDLYGALPYIRG 573
+KK T LS R+ N++ T K +GSS+KE Q + A PY+R
Sbjct: 596 SKKPGTGLSNTTMRILNLLESYSTPLIDAKRMGSSIKEHQSSRQQRQGTP---ATPYLRS 652
Query: 574 ELDERSLKLENYEIDEDIEV-SQPLSVP 654
R++ + N+ I+E E+ S L VP
Sbjct: 653 TSASRNVSVPNH-INELAELRSNKLLVP 679
>EF058033-1|ABL84968.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.9 bits (64), Expect = 4.0
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +1
Query: 394 NKKCSTHLSVLVHRVFNVVIPQPTEEPGDKWIGSSVKEGQEVTFRIAALDLYGALPYIRG 573
+KK T LS R+ N++ T K +GSS+KE Q + A PY+R
Sbjct: 596 SKKPGTGLSNTTMRILNLLESYSTPLIDAKRMGSSIKEHQSSRQQRQGTP---ATPYLRS 652
Query: 574 ELDERSLKLENYEIDEDIEV-SQPLSVP 654
R++ + N+ I+E E+ S L VP
Sbjct: 653 TSASRNVSVPNH-INELAELRSNKLLVP 679
>EF058032-1|ABL84967.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.9 bits (64), Expect = 4.0
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +1
Query: 394 NKKCSTHLSVLVHRVFNVVIPQPTEEPGDKWIGSSVKEGQEVTFRIAALDLYGALPYIRG 573
+KK T LS R+ N++ T K +GSS+KE Q + A PY+R
Sbjct: 596 SKKPGTGLSNTTMRILNLLESYSTPLIDAKRMGSSIKEHQSSRQQRQGTP---ATPYLRS 652
Query: 574 ELDERSLKLENYEIDEDIEV-SQPLSVP 654
R++ + N+ I+E E+ S L VP
Sbjct: 653 TSASRNVSVPNH-INELAELRSNKLLVP 679
>EF058031-1|ABL84966.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.9 bits (64), Expect = 4.0
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +1
Query: 394 NKKCSTHLSVLVHRVFNVVIPQPTEEPGDKWIGSSVKEGQEVTFRIAALDLYGALPYIRG 573
+KK T LS R+ N++ T K +GSS+KE Q + A PY+R
Sbjct: 596 SKKPGTGLSNTTMRILNLLESYSTPLIDAKRMGSSIKEHQSSRQQRQGTP---ATPYLRS 652
Query: 574 ELDERSLKLENYEIDEDIEV-SQPLSVP 654
R++ + N+ I+E E+ S L VP
Sbjct: 653 TSASRNVSVPNH-INELAELRSNKLLVP 679
>EF058030-1|ABL84965.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.9 bits (64), Expect = 4.0
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +1
Query: 394 NKKCSTHLSVLVHRVFNVVIPQPTEEPGDKWIGSSVKEGQEVTFRIAALDLYGALPYIRG 573
+KK T LS R+ N++ T K +GSS+KE Q + A PY+R
Sbjct: 596 SKKPGTGLSNTTMRILNLLESYSTPLIDAKRMGSSIKEHQSSRQQRQGTP---ATPYLRS 652
Query: 574 ELDERSLKLENYEIDEDIEV-SQPLSVP 654
R++ + N+ I+E E+ S L VP
Sbjct: 653 TSASRNVSVPNH-INELAELRSNKLLVP 679
>EF058029-1|ABL84964.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.9 bits (64), Expect = 4.0
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +1
Query: 394 NKKCSTHLSVLVHRVFNVVIPQPTEEPGDKWIGSSVKEGQEVTFRIAALDLYGALPYIRG 573
+KK T LS R+ N++ T K +GSS+KE Q + A PY+R
Sbjct: 596 SKKPGTGLSNTTMRILNLLESYSTPLIDAKRMGSSIKEHQSSRQQRQGTP---ATPYLRS 652
Query: 574 ELDERSLKLENYEIDEDIEV-SQPLSVP 654
R++ + N+ I+E E+ S L VP
Sbjct: 653 TSASRNVSVPNH-INELAELRSNKLLVP 679
>EF058028-1|ABL84963.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.9 bits (64), Expect = 4.0
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +1
Query: 394 NKKCSTHLSVLVHRVFNVVIPQPTEEPGDKWIGSSVKEGQEVTFRIAALDLYGALPYIRG 573
+KK T LS R+ N++ T K +GSS+KE Q + A PY+R
Sbjct: 596 SKKPGTGLSNTTMRILNLLESYSTPLIDAKRMGSSIKEHQSSRQQRQGTP---ATPYLRS 652
Query: 574 ELDERSLKLENYEIDEDIEV-SQPLSVP 654
R++ + N+ I+E E+ S L VP
Sbjct: 653 TSASRNVSVPNH-INELAELRSNKLLVP 679
>EF058027-1|ABL84962.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.9 bits (64), Expect = 4.0
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +1
Query: 394 NKKCSTHLSVLVHRVFNVVIPQPTEEPGDKWIGSSVKEGQEVTFRIAALDLYGALPYIRG 573
+KK T LS R+ N++ T K +GSS+KE Q + A PY+R
Sbjct: 596 SKKPGTGLSNTTMRILNLLESYSTPLIDAKRMGSSIKEHQSSRQQRQGTP---ATPYLRS 652
Query: 574 ELDERSLKLENYEIDEDIEV-SQPLSVP 654
R++ + N+ I+E E+ S L VP
Sbjct: 653 TSASRNVSVPNH-INELAELRSNKLLVP 679
>EF058026-1|ABL84961.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.9 bits (64), Expect = 4.0
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +1
Query: 394 NKKCSTHLSVLVHRVFNVVIPQPTEEPGDKWIGSSVKEGQEVTFRIAALDLYGALPYIRG 573
+KK T LS R+ N++ T K +GSS+KE Q + A PY+R
Sbjct: 596 SKKPGTGLSNTTMRILNLLESYSTPLIDAKRMGSSIKEHQSSRQQRQGTP---ATPYLRS 652
Query: 574 ELDERSLKLENYEIDEDIEV-SQPLSVP 654
R++ + N+ I+E E+ S L VP
Sbjct: 653 TSASRNVSVPNH-INELAELRSNKLLVP 679
>EF058025-1|ABL84960.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.9 bits (64), Expect = 4.0
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +1
Query: 394 NKKCSTHLSVLVHRVFNVVIPQPTEEPGDKWIGSSVKEGQEVTFRIAALDLYGALPYIRG 573
+KK T LS R+ N++ T K +GSS+KE Q + A PY+R
Sbjct: 596 SKKPGTGLSNTTMRILNLLESYSTPLIDAKRMGSSIKEHQSSRQQRQGTP---ATPYLRS 652
Query: 574 ELDERSLKLENYEIDEDIEV-SQPLSVP 654
R++ + N+ I+E E+ S L VP
Sbjct: 653 TSASRNVSVPNH-INELAELRSNKLLVP 679
>EF058024-1|ABL84959.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 29.9 bits (64), Expect = 4.0
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +1
Query: 394 NKKCSTHLSVLVHRVFNVVIPQPTEEPGDKWIGSSVKEGQEVTFRIAALDLYGALPYIRG 573
+KK T LS R+ N++ T K +GSS+KE Q + A PY+R
Sbjct: 596 SKKPGTGLSNTTMRILNLLESYSTPLIDAKRMGSSIKEHQSSRQQRQGTP---ATPYLRS 652
Query: 574 ELDERSLKLENYEIDEDIEV-SQPLSVP 654
R++ + N+ I+E E+ S L VP
Sbjct: 653 TSASRNVSVPNH-INELAELRSNKLLVP 679
>BT025178-1|ABE98144.1| 1883|Drosophila melanogaster LD46479p
protein.
Length = 1883
Score = 29.9 bits (64), Expect = 4.0
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +1
Query: 394 NKKCSTHLSVLVHRVFNVVIPQPTEEPGDKWIGSSVKEGQEVTFRIAALDLYGALPYIRG 573
+KK T LS R+ N++ T K +GSS+KE Q + A PY+R
Sbjct: 596 SKKPGTGLSNTTMRILNLLESYSTPLIDAKRMGSSIKEHQSSRQQRQGTP---ATPYLRS 652
Query: 574 ELDERSLKLENYEIDEDIEV-SQPLSVP 654
R++ + N+ I+E E+ S L VP
Sbjct: 653 TSASRNVSVPNH-INELAELRSNKLLVP 679
>AE014298-2429|AAF48628.3| 1905|Drosophila melanogaster CG4453-PA
protein.
Length = 1905
Score = 29.9 bits (64), Expect = 4.0
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +1
Query: 394 NKKCSTHLSVLVHRVFNVVIPQPTEEPGDKWIGSSVKEGQEVTFRIAALDLYGALPYIRG 573
+KK T LS R+ N++ T K +GSS+KE Q + A PY+R
Sbjct: 618 SKKPGTGLSNTTMRILNLLESYSTPLIDAKRMGSSIKEHQSSRQQRQGTP---ATPYLRS 674
Query: 574 ELDERSLKLENYEIDEDIEV-SQPLSVP 654
R++ + N+ I+E E+ S L VP
Sbjct: 675 TSASRNVSVPNH-INELAELRSNKLLVP 701
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 29.1 bits (62), Expect = 7.0
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 265 YKNPCILQNVGTIRNDNADIHFQVQADYFIFQPYIGAKLTGLVNKKCSTHLSVL 426
Y+NPC V R + A Q +Y+ PY G + ++N CS+HL+ L
Sbjct: 17964 YQNPCGSNAVCRERGEAASC--QCLPEYY-GNPYEGCRPECVLNSDCSSHLACL 18014
>BT015300-1|AAT94529.1| 433|Drosophila melanogaster AT22779p
protein.
Length = 433
Score = 28.7 bits (61), Expect = 9.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 571 GELDERSLKLENYEIDEDIEVSQPLSVP 654
GE + S K++ Y ++E + +SQP+S P
Sbjct: 298 GECGQDSYKVKWYRLEEPVAISQPVSQP 325
>BT014930-1|AAT47781.1| 433|Drosophila melanogaster AT01023p
protein.
Length = 433
Score = 28.7 bits (61), Expect = 9.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 571 GELDERSLKLENYEIDEDIEVSQPLSVP 654
GE + S K++ Y ++E + +SQP+S P
Sbjct: 298 GECGQDSYKVKWYRLEEPVAISQPVSQP 325
>AE014296-250|AAF47493.1| 433|Drosophila melanogaster CG9173-PA
protein.
Length = 433
Score = 28.7 bits (61), Expect = 9.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 571 GELDERSLKLENYEIDEDIEVSQPLSVP 654
GE + S K++ Y ++E + +SQP+S P
Sbjct: 298 GECGQDSYKVKWYRLEEPVAISQPVSQP 325
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,517,136
Number of Sequences: 53049
Number of extensions: 550962
Number of successful extensions: 1142
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1140
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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