Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6086
         (824 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    23   4.5  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   6.0  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   6.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   6.0  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   6.0  

>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 670 YSHT*NNQFNQSETRLYRILYMANLSQ 750
           Y++  NN +N    +LY   Y+ N+ Q
Sbjct: 330 YNNYNNNNYNNYNKKLYYKNYIINIEQ 356


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 570 EKVFFQFLRKLVKYIHELKISNPK 641
           + VFF   + ++ Y H+ K + PK
Sbjct: 414 DPVFFSIYKTILDYYHKYKENLPK 437


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -1

Query: 758 NCV*LKFAIYNIRYSLVSL 702
           NC+  +FA+Y  +  L+++
Sbjct: 443 NCIGARFAVYQTKVGLITI 461


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 570 EKVFFQFLRKLVKYIHELKISNPK 641
           + VFF   + ++ Y H+ K + PK
Sbjct: 414 DPVFFSIYKTILDYYHKYKENLPK 437


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 570 EKVFFQFLRKLVKYIHELKISNPK 641
           + VFF   + ++ Y H+ K + PK
Sbjct: 40  DPVFFSIYKTILDYYHKYKENLPK 63


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,267
Number of Sequences: 438
Number of extensions: 4485
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)