Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6082
         (773 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23517-10|AAB93341.3|  337|Caenorhabditis elegans Carbonic anhyd...    34   0.098
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ...    28   8.5  

>U23517-10|AAB93341.3|  337|Caenorhabditis elegans Carbonic
           anhydrase protein 2 protein.
          Length = 337

 Score = 34.3 bits (75), Expect = 0.098
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -3

Query: 453 LSYISCNEKITWVLLNNSVVWTNSD 379
           L++  C+E +TWV+LNN +  TN D
Sbjct: 211 LTFPGCHETVTWVILNNPIYITNDD 235


>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
            protein F39C12.1 protein.
          Length = 5105

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = +1

Query: 241  ETFF-LIDKNRNI--PIKYQLSSKNNILPKLSLQ*KTNE*RNIFY 366
            +TFF  +D+  ++  PIK   SSKN ILPK     KT     ++Y
Sbjct: 4390 QTFFECLDEYIDVGTPIKLVFSSKNTILPKKMFDVKTKLIDPVYY 4434


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,049,195
Number of Sequences: 27780
Number of extensions: 421849
Number of successful extensions: 960
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)