Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6077
(814 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical ... 33 0.18
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 32 0.42
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 32 0.42
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 32 0.42
U55364-5|AAQ23124.1| 368|Caenorhabditis elegans Prion-like-(q/n... 32 0.56
U55364-4|AAA97972.1| 382|Caenorhabditis elegans Prion-like-(q/n... 32 0.56
U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical pr... 30 1.7
L13200-7|AAA28189.1| 206|Caenorhabditis elegans Prion-like-(q/n... 30 1.7
AF039038-1|AAK21435.1| 877|Caenorhabditis elegans Hypothetical ... 29 3.0
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.0
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.0
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.0
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 29 4.0
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 29 4.0
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 29 4.0
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 29 4.0
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 29 4.0
AF003740-1|AAM15561.2| 488|Caenorhabditis elegans Hypothetical ... 29 4.0
AF003130-18|AAO38640.1| 441|Caenorhabditis elegans Prion-like-(... 29 4.0
AF003130-17|AAB54127.1| 470|Caenorhabditis elegans Prion-like-(... 29 4.0
AF003130-16|AAK68879.1| 457|Caenorhabditis elegans Prion-like-(... 29 4.0
AF003130-15|AAM45365.1| 465|Caenorhabditis elegans Prion-like-(... 29 4.0
Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical pr... 29 5.2
U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical p... 29 5.2
U53332-11|AAK31531.1| 668|Caenorhabditis elegans Protein tyrosi... 29 5.2
AF015882-1|AAC21678.1| 668|Caenorhabditis elegans protein tyros... 29 5.2
Z75714-11|CAB00063.2| 723|Caenorhabditis elegans Hypothetical p... 28 6.9
Z75714-10|CAN99711.1| 721|Caenorhabditis elegans Hypothetical p... 28 6.9
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr... 28 6.9
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 28 6.9
Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical p... 28 9.1
Z49128-2|CAA88959.1| 848|Caenorhabditis elegans Hypothetical pr... 28 9.1
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 28 9.1
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 28 9.1
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 9.1
AF125448-6|AAD12811.1| 160|Caenorhabditis elegans Hypothetical ... 28 9.1
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 9.1
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 9.1
>AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical
protein Y73C8C.8 protein.
Length = 946
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +3
Query: 414 IRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*LCPRA 569
+RE P AE P S SK V ++ +P P+A+PE S C RA
Sbjct: 555 VREISPVAENLEPTSESKRVKSKKQKKQKPSENPIAKPEEKQSNACPKCFRA 606
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 592 GLDSEIGPALGHS*VGSLHTGSGLATGPDFGSGN 491
G ++ +GP G+ G GSG A G FGSGN
Sbjct: 59 GGNNNVGPRFGNGNAGGTGFGSGNAGGTGFGSGN 92
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 592 GLDSEIGPALGHS*VGSLHTGSGLATGPDFGSGN 491
G ++ +GP G+ G GSG A G FGSGN
Sbjct: 59 GGNNNVGPRFGNGNAGGTGFGSGNAGGTGFGSGN 92
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 592 GLDSEIGPALGHS*VGSLHTGSGLATGPDFGSGN 491
G ++ +GP G+ G GSG A G FGSGN
Sbjct: 59 GGNNNVGPRFGNGNAGGTGFGSGNAGGTGFGSGN 92
>U55364-5|AAQ23124.1| 368|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 31,
isoform b protein.
Length = 368
Score = 31.9 bits (69), Expect = 0.56
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 604 NNQNQLQVQTGQYGHNTGQNYQTSQFNGQSYQPGQF 711
N QNQ Q GQ ++ Q Q N Q YQ G +
Sbjct: 294 NGQNQFQQSNGQNQNSQYQQTSNQQMNNQQYQTGDY 329
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 607 NQNQLQVQTGQYGHNTGQNYQTSQFNGQSYQPGQ 708
NQNQ+Q Q ++T N Q N YQ GQ
Sbjct: 70 NQNQMQNQQNSNQYSTTSNMNNQQ-NSNQYQQGQ 102
>U55364-4|AAA97972.1| 382|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 31,
isoform a protein.
Length = 382
Score = 31.9 bits (69), Expect = 0.56
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 604 NNQNQLQVQTGQYGHNTGQNYQTSQFNGQSYQPGQF 711
N QNQ Q GQ ++ Q Q N Q YQ G +
Sbjct: 308 NGQNQFQQSNGQNQNSQYQQTSNQQMNNQQYQTGDY 343
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 607 NQNQLQVQTGQYGHNTGQNYQTSQFNGQSYQPGQ 708
NQNQ+Q Q ++T N Q N YQ GQ
Sbjct: 84 NQNQMQNQQNSNQYSTTSNMNNQQ-NSNQYQQGQ 116
>U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical
protein K03C7.1 protein.
Length = 867
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +3
Query: 420 ESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT 551
+S+ +PK P+ SK+ ++ + P+PK P P+P +EP+
Sbjct: 14 DSLGGPKPKDPKLASKAPAKKPSETPKPKEVPKELPKP--AEPS 55
>L13200-7|AAA28189.1| 206|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 96
protein.
Length = 206
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +1
Query: 601 GNNQNQLQVQTGQYGHNTGQNYQTSQFNGQSYQPGQFFRPKH 726
G Q Q Q GQY +GQ YQ+ Q QS Q +P H
Sbjct: 38 GQQPFQPQFQQGQYQQPSGQQYQSMQQQFQSPQQQAPTQPTH 79
>AF039038-1|AAK21435.1| 877|Caenorhabditis elegans Hypothetical
protein K06A5.4 protein.
Length = 877
Score = 29.5 bits (63), Expect = 3.0
Identities = 23/88 (26%), Positives = 41/88 (46%)
Frame = +2
Query: 323 RTQLQLVQQFQTRAAMVGLKPKDSFKTSPNNQGINSKRRTKITTVRLKISFKGNRTISRT 502
RT + ++ TRA+++ +DS + NN NS R + ++ +FK + +S
Sbjct: 749 RTPIVTKKRGGTRASIMPKPVEDSPMSRGNNSTFNSPRLEQTKAKDIETNFKYVQHLSMM 808
Query: 503 KIRSSCKARTSME*TNLTMSKGRANFRI 586
+ R S + + S N T +G N I
Sbjct: 809 QARPSSRLKKSSSMNNSTY-RGNKNTSI 835
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 450 PRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*LCPRAGPISESSP 593
PR S+ S + E+ P+ P P S PT PR P + S P
Sbjct: 390 PRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPP 437
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 450 PRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*LCPRAGPISESSP 593
PR S+ S + E+ P+ P P S PT PR P + S P
Sbjct: 411 PRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPP 458
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 450 PRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*LCPRAGPISESSP 593
PR S+ S + E+ P+ P P S PT PR P + S P
Sbjct: 396 PRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPP 443
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 604 NNQNQLQVQTGQYGHNTGQNYQTSQFNGQSYQPGQ 708
+ QN Q GQY +YQ S + +YQPGQ
Sbjct: 2726 SQQNPYMNQQGQYSQQPPPSYQQSSY-PNNYQPGQ 2759
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Frame = +3
Query: 378 SNPRTVSKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPE-PKSGPVARPEP--VWSEP 548
+ PR+ PT ++ + PK P++ + T + P PK+ V PEP V EP
Sbjct: 446 ATPRSSVPATPT-ESNLTTPAPKTPKTPKTPRTPRTPKTPRTPKTPAVVEPEPEPVAEEP 504
Query: 549 T*LC---PRAGPISESSP 593
+ P P++E+ P
Sbjct: 505 EPVAEPEPEPEPVAEAEP 522
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Frame = +3
Query: 378 SNPRTVSKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPE-PKSGPVARPEP--VWSEP 548
+ PR+ PT ++ + PK P++ + T + P PK+ V PEP V EP
Sbjct: 396 ATPRSSVPATPT-ESNLTTPAPKTPKTPKTPRTPRTPKTPRTPKTPAVVEPEPEPVAEEP 454
Query: 549 T*LC---PRAGPISESSP 593
+ P P++E+ P
Sbjct: 455 EPVAEPEPEPEPVAEAEP 472
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Frame = +3
Query: 378 SNPRTVSKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPE-PKSGPVARPEP--VWSEP 548
+ PR+ PT ++ + PK P++ + T + P PK+ V PEP V EP
Sbjct: 446 ATPRSSVPATPT-ESNLTTPAPKTPKTPKTPRTPRTPKTPRTPKTPAVVEPEPEPVAEEP 504
Query: 549 T*LC---PRAGPISESSP 593
+ P P++E+ P
Sbjct: 505 EPVAEPEPEPEPVAEAEP 522
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Frame = +3
Query: 378 SNPRTVSKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPE-PKSGPVARPEP--VWSEP 548
+ PR+ PT ++ + PK P++ + T + P PK+ V PEP V EP
Sbjct: 446 ATPRSSVPATPT-ESNLTTPAPKTPKTPKTPRTPRTPKTPRTPKTPAVVEPEPEPVAEEP 504
Query: 549 T*LC---PRAGPISESSP 593
+ P P++E+ P
Sbjct: 505 EPVAEPEPEPEPVAEAEP 522
>AF003740-1|AAM15561.2| 488|Caenorhabditis elegans Hypothetical
protein C41D11.3 protein.
Length = 488
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -1
Query: 811 TFLLPNTIK*P*KGTGPDPSPDPEPNELCVLAGKIGQVDSS 689
TFL P I P P P PDPEP + V A V+S+
Sbjct: 93 TFLKP--IATPIIDVSPTPRPDPEPLRIIVAAAAAAPVEST 131
>AF003130-18|AAO38640.1| 441|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 44,
isoform d protein.
Length = 441
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +1
Query: 601 GNNQNQLQVQTGQYGHNTGQNYQTSQFNGQSYQPGQ 708
GN QNQ Q Q N QN Q Q + Q YQ Q
Sbjct: 4 GNGQNQQGNQQYQQCQNNYQNQQNHQNSNQGYQEPQ 39
>AF003130-17|AAB54127.1| 470|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 44,
isoform a protein.
Length = 470
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +1
Query: 601 GNNQNQLQVQTGQYGHNTGQNYQTSQFNGQSYQPGQ 708
GN QNQ Q Q N QN Q Q + Q YQ Q
Sbjct: 33 GNGQNQQGNQQYQQCQNNYQNQQNHQNSNQGYQEPQ 68
>AF003130-16|AAK68879.1| 457|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 44,
isoform b protein.
Length = 457
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +1
Query: 601 GNNQNQLQVQTGQYGHNTGQNYQTSQFNGQSYQPGQ 708
GN QNQ Q Q N QN Q Q + Q YQ Q
Sbjct: 20 GNGQNQQGNQQYQQCQNNYQNQQNHQNSNQGYQEPQ 55
>AF003130-15|AAM45365.1| 465|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 44,
isoform c protein.
Length = 465
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +1
Query: 601 GNNQNQLQVQTGQYGHNTGQNYQTSQFNGQSYQPGQ 708
GN QNQ Q Q N QN Q Q + Q YQ Q
Sbjct: 28 GNGQNQQGNQQYQQCQNNYQNQQNHQNSNQGYQEPQ 63
>Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical protein
F20C5.2b protein.
Length = 1130
Score = 28.7 bits (61), Expect = 5.2
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +2
Query: 221 LHPPTKPTRVSRNRSSKAKIS 283
LHPPT P+++S++ SS + ++
Sbjct: 1078 LHPPTSPSKISKSASSSSDLT 1098
>U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical
protein B0207.1 protein.
Length = 564
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Frame = +3
Query: 384 PRTVSKLRPTIRESIPSA--EPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*L 557
P L PT++E +P+ P LPR Q P ++ P P PV P
Sbjct: 76 PPMTMMLPPTVQEPLPTPVKTPPLPRPPGNLNPVQQPQIPVQRTPPQCPPPPVPHPPQ-- 133
Query: 558 CPRAGPISESSP 593
+ PI +SP
Sbjct: 134 ITQMAPILPTSP 145
>U53332-11|AAK31531.1| 668|Caenorhabditis elegans Protein tyrosine
phosphatase protein2 protein.
Length = 668
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 399 KLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARP 527
+LRPT S PS+ ++ S S + + P++GP A P
Sbjct: 605 RLRPTPNASRPSSARQVTSSRPSSSASSRTSHSRPRTGPQAEP 647
>AF015882-1|AAC21678.1| 668|Caenorhabditis elegans protein tyrosine
phosphatase protein.
Length = 668
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 399 KLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARP 527
+LRPT S PS+ ++ S S + + P++GP A P
Sbjct: 605 RLRPTPNASRPSSARQVTSSRPSSSASSRTSHSRPRTGPQAEP 647
>Z75714-11|CAB00063.2| 723|Caenorhabditis elegans Hypothetical
protein ZC434.6b protein.
Length = 723
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 638 SMDTILGKTTKLANLTDRAINLANFSGQNTQFIGFG 745
SM T + K K +N ++R + A F+G++ +IG G
Sbjct: 315 SMGTQIEKWQKASNTSNRNVFFAFFNGESLDYIGSG 350
>Z75714-10|CAN99711.1| 721|Caenorhabditis elegans Hypothetical
protein ZC434.6a protein.
Length = 721
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 638 SMDTILGKTTKLANLTDRAINLANFSGQNTQFIGFG 745
SM T + K K +N ++R + A F+G++ +IG G
Sbjct: 315 SMGTQIEKWQKASNTSNRNVFFAFFNGESLDYIGSG 350
>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical
protein H03E18.1 protein.
Length = 1147
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +3
Query: 384 PRTVSKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKS 509
P++ K +P ++ P+ +PK+ +K+V ++ +PKS
Sbjct: 338 PKSAEKKKPDTKKETPTKKPKVELVTAKTVEGEKKETKKPKS 379
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 28.3 bits (60), Expect = 6.9
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 318 WNVPSYS*SNNSKPGQLWWVSNPRTVSKLRPTIRE-SIPSAEPKLPRSGSKSVSRATEQF 494
+ VPS ++S P + W++N R SK ++E + P + +P VS E+
Sbjct: 2771 FTVPSLLELDDSSPLKNTWLTNTRKNSKGEKKVKENTAPVQQAPVP------VSPPREET 2824
Query: 495 PEPKSGPVAR 524
PEP P R
Sbjct: 2825 PEPTPSPPVR 2834
>Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical
protein T11G6.5 protein.
Length = 1406
Score = 27.9 bits (59), Expect = 9.1
Identities = 22/70 (31%), Positives = 28/70 (40%)
Frame = +3
Query: 387 RTVSKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*LCPR 566
RT ++ RES S + P+ S S +T P RP PV P P
Sbjct: 588 RTNAQRESVERESSQSPQLYDPKRIPHSASISTNIPGSPTQ--FNRPPPVLHSPRSALPS 645
Query: 567 AGPISESSPI 596
AGP S P+
Sbjct: 646 AGPFSSPQPV 655
>Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical
protein T11G6.5 protein.
Length = 1406
Score = 27.9 bits (59), Expect = 9.1
Identities = 22/70 (31%), Positives = 28/70 (40%)
Frame = +3
Query: 387 RTVSKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*LCPR 566
RT ++ RES S + P+ S S +T P RP PV P P
Sbjct: 588 RTNAQRESVERESSQSPQLYDPKRIPHSASISTNIPGSPTQ--FNRPPPVLHSPRSALPS 645
Query: 567 AGPISESSPI 596
AGP S P+
Sbjct: 646 AGPFSSPQPV 655
>Z49128-2|CAA88959.1| 848|Caenorhabditis elegans Hypothetical
protein M03C11.2 protein.
Length = 848
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 417 RESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPV 536
+E I K +G + + A E PEP++ P+ P+PV
Sbjct: 481 KEEIKKENEKPKLTGIQKLMAAKEAEPEPEAEPLPPPKPV 520
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +3
Query: 408 PTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*LCPRAGPIS 581
P+ PS++ P +GS + S+ + Q P P P + P S + + P S
Sbjct: 384 PSSSSPQPSSQSPAPNTGSTTPSQTSSQSPSPSMNP-SSSTPTGSSQSTITPEGSTAS 440
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +3
Query: 408 PTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*LCPRAGPIS 581
P+ PS++ P +GS + S+ + Q P P P + P S + + P S
Sbjct: 591 PSSSSPQPSSQSPAPNTGSTTPSQTSSQSPSPSMNP-SSSTPTGSSQSTITPEGSTAS 647
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +3
Query: 408 PTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*LCPRAGPIS 581
P+ PS++ P +GS + S+ + Q P P P + P S + + P S
Sbjct: 591 PSSSSPQPSSQSPAPNTGSTTPSQTSSQSPSPSMNP-SSSTPTGSSQSTITPEGSTAS 647
>AF125448-6|AAD12811.1| 160|Caenorhabditis elegans Hypothetical
protein H14E04.4 protein.
Length = 160
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 578 FRIKPNMLVIIKINYKCKLGSMDTILGKTTKLANLTDRAINLANFSGQNTQFI-GFGVWT 754
F+ P L +N+ CK + T+ K + + T + +N NFS + + + FGV
Sbjct: 71 FQFAPKELCFF-LNFSCKNTFLSTLCSKNKQKTSKTAKVMNFQNFSKKFLKNLKNFGVSP 129
Query: 755 R 757
R
Sbjct: 130 R 130
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +3
Query: 405 RPTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*LCPRAGPI 578
RPT ES P P LP S + + T P PK P RP P+ + P P + P+
Sbjct: 68 RPT--ESPPLPPPPLPLSNPPA--KPTPPPPPPK--PTIRPPPIPASPPPRPPASEPV 119
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +3
Query: 405 RPTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*LCPRAGPI 578
RPT ES P P LP S + + T P PK P RP P+ + P P + P+
Sbjct: 290 RPT--ESPPLPPPPLPLSNPPA--KPTPPPPPPK--PTIRPPPIPASPPPRPPASEPV 341
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,898,321
Number of Sequences: 27780
Number of extensions: 386898
Number of successful extensions: 1662
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1571
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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