Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6077
         (814 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               27   0.21 
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    27   0.27 
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    24   1.5  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    24   1.5  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      24   1.9  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    24   1.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   1.9  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    23   2.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.5  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   3.4  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   5.9  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   5.9  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   7.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   7.8  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   7.8  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   7.8  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 27.1 bits (57), Expect = 0.21
 Identities = 13/49 (26%), Positives = 26/49 (53%)
 Frame = +3

Query: 354 KPGQLWWVSNPRTVSKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPE 500
           +PG +  VS   ++ + +PT+ +  P+A+P++ R       R   Q P+
Sbjct: 714 QPGAMEQVSYLTSLERTQPTMSQMPPTAQPRMERLA--EAVRTASQIPQ 760


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 26.6 bits (56), Expect = 0.27
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +1

Query: 646 HNT-GQNYQTSQFN-GQSYQPGQFFRPKHTIHWVRGL 750
           +NT  +N+QT     G SY P     P+  +H +RGL
Sbjct: 537 YNTRAENHQTGTAKMGPSYDPMAVVSPRLKVHGIRGL 573


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 221 LHPPTKPTRVSRNRSSKAK 277
           L PPT+PTR+ R    +A+
Sbjct: 22  LDPPTRPTRLRREAKPEAE 40


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 221 LHPPTKPTRVSRNRSSKAK 277
           L PPT+PTR+ R    +A+
Sbjct: 23  LDPPTRPTRLRREAEPEAE 41


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = +2

Query: 380 KPKDSFKTSPNNQGINSKRRTKITTVRLKISFKGNRTISRTKIR 511
           +P  S K+       N KR+ K +T+  +   + N + ++TK+R
Sbjct: 198 EPSSSTKSYVLEGPRNGKRKRKSSTIENESETESNASSTKTKMR 241


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 7/31 (22%), Positives = 16/31 (51%)
 Frame = +1

Query: 604 NNQNQLQVQTGQYGHNTGQNYQTSQFNGQSY 696
           + + Q  +Q+G+Y H     +   Q+ G ++
Sbjct: 51  DERRQAAMQSGEYDHTKNYPFDVDQWRGMTF 81


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 29  CHTFSRTNQHNDSAVGTT 82
           C+ F +TN   DS+ GTT
Sbjct: 719 CNMFRKTNLSGDSSSGTT 736


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 650 ILGKTTKLANLTDRAINLANFSGQ 721
           ILG   +LAN T ++I L +F G+
Sbjct: 78  ILGFLGRLANPTPQSITLISFPGE 101


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +1

Query: 637  QYGHNTGQNYQTSQFNGQSYQPGQFFRP 720
            Q G+N+G N    Q N Q  Q  Q   P
Sbjct: 1561 QRGYNSGNNRSGEQANSQQQQQQQSGEP 1588


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 504 KSGPVARPEPVWS 542
           K GP+ RP P WS
Sbjct: 105 KGGPLLRPYPDWS 117


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 221 LHPPTKPTRVSRNRSSKAK 277
           L PPT+P R+ R    +A+
Sbjct: 23  LDPPTRPARLRREAKPEAE 41


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 6/31 (19%), Positives = 17/31 (54%)
 Frame = +1

Query: 604 NNQNQLQVQTGQYGHNTGQNYQTSQFNGQSY 696
           + + Q  +Q+G+Y +         ++NG+++
Sbjct: 48  DEKRQAAIQSGEYNYKNNVPIDVDRWNGKTF 78


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +1

Query: 721 KHTIHWVR 744
           KHT+HW R
Sbjct: 21  KHTVHWFR 28


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 592  GLDSEIGPALGHS*VGSLHTGSGLATGP 509
            G    +GP +GH    S H+ SG  + P
Sbjct: 1754 GHSGTMGPPVGHPTNASAHSRSGSQSMP 1781


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 6/29 (20%), Positives = 15/29 (51%)
 Frame = +1

Query: 610 QNQLQVQTGQYGHNTGQNYQTSQFNGQSY 696
           + Q  +Q+G+Y H     +   Q+  +++
Sbjct: 50  RRQAAIQSGEYDHTKNYPFDVDQWRDKTF 78


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 50  NQHNDSAVGTTKGSPH 97
           +QH +  +G T G PH
Sbjct: 336 HQHGNHTMGPTMGPPH 351


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,323
Number of Sequences: 438
Number of extensions: 5061
Number of successful extensions: 21
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)