Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6074
         (463 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.    23   5.2  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    22   9.1  

>AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.
          Length = 187

 Score = 23.0 bits (47), Expect = 5.2
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -1

Query: 295 CCVVERCSNEI*HSPKRFTVHVVLLPLSRTTTL 197
           CC V RC      S  +  V + L P+S   TL
Sbjct: 50  CCTVPRCWQVSLDSDYQIDVVLPLPPISNVVTL 82


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 253 PKRFTVHVVLLPLSRTTTLV 194
           P+  T H V+LP S  +T V
Sbjct: 209 PRASTSHAVMLPRSEASTAV 228


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 414,823
Number of Sequences: 2352
Number of extensions: 5847
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39969834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)