Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6073
         (413 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC038225-1|AAH38225.1| 1101|Homo sapiens structural maintenance ...    29   8.1  
BC017666-1|AAH17666.1|  941|Homo sapiens Unknown (protein for IM...    29   8.1  
AL162390-1|CAH73243.1| 1101|Homo sapiens structural maintenance ...    29   8.1  
AJ310550-1|CAC39247.1| 1101|Homo sapiens SMC5 protein protein.         29   8.1  
AB011166-1|BAA25520.2| 1120|Homo sapiens KIAA0594 protein protein.     29   8.1  

>BC038225-1|AAH38225.1| 1101|Homo sapiens structural maintenance of
           chromosomes 5 protein.
          Length = 1101

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 21/79 (26%), Positives = 41/79 (51%)
 Frame = -2

Query: 298 LTWDVTNTSPSPHWW*DLL*VRASRYHRPAYFCREAVMRLGLKGKAAVVTKYTKILELIS 119
           LT+D+   SP PH   +++ V A+   + +  C    + LGL GK A + +  K+   + 
Sbjct: 62  LTYDICEVSPGPHL--NMI-VGANGTGKSSIVC---AICLGLAGKPAFMGRADKVGFFVK 115

Query: 118 QGGWRRIYIVDVYGLSNHL 62
           +G  R +  ++++  S +L
Sbjct: 116 RGCSRGMVEIELFRASGNL 134


>BC017666-1|AAH17666.1|  941|Homo sapiens Unknown (protein for
           IMAGE:3913418) protein.
          Length = 941

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 21/79 (26%), Positives = 41/79 (51%)
 Frame = -2

Query: 298 LTWDVTNTSPSPHWW*DLL*VRASRYHRPAYFCREAVMRLGLKGKAAVVTKYTKILELIS 119
           LT+D+   SP PH   +++ V A+   + +  C    + LGL GK A + +  K+   + 
Sbjct: 62  LTYDICEVSPGPHL--NMI-VGANGTGKSSIVC---AICLGLAGKPAFMGRADKVGFFVK 115

Query: 118 QGGWRRIYIVDVYGLSNHL 62
           +G  R +  ++++  S +L
Sbjct: 116 RGCSRGMVEIELFRASGNL 134


>AL162390-1|CAH73243.1| 1101|Homo sapiens structural maintenance of
           chromosomes 5 protein.
          Length = 1101

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 21/79 (26%), Positives = 41/79 (51%)
 Frame = -2

Query: 298 LTWDVTNTSPSPHWW*DLL*VRASRYHRPAYFCREAVMRLGLKGKAAVVTKYTKILELIS 119
           LT+D+   SP PH   +++ V A+   + +  C    + LGL GK A + +  K+   + 
Sbjct: 62  LTYDICEVSPGPHL--NMI-VGANGTGKSSIVC---AICLGLAGKPAFMGRADKVGFFVK 115

Query: 118 QGGWRRIYIVDVYGLSNHL 62
           +G  R +  ++++  S +L
Sbjct: 116 RGCSRGMVEIELFRASGNL 134


>AJ310550-1|CAC39247.1| 1101|Homo sapiens SMC5 protein protein.
          Length = 1101

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 21/79 (26%), Positives = 41/79 (51%)
 Frame = -2

Query: 298 LTWDVTNTSPSPHWW*DLL*VRASRYHRPAYFCREAVMRLGLKGKAAVVTKYTKILELIS 119
           LT+D+   SP PH   +++ V A+   + +  C    + LGL GK A + +  K+   + 
Sbjct: 62  LTYDICEVSPGPHL--NMI-VGANGTGKSSIVC---AICLGLAGKPAFMGRADKVGFFVK 115

Query: 118 QGGWRRIYIVDVYGLSNHL 62
           +G  R +  ++++  S +L
Sbjct: 116 RGCSRGMVEIELFRASGNL 134


>AB011166-1|BAA25520.2| 1120|Homo sapiens KIAA0594 protein protein.
          Length = 1120

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 21/79 (26%), Positives = 41/79 (51%)
 Frame = -2

Query: 298 LTWDVTNTSPSPHWW*DLL*VRASRYHRPAYFCREAVMRLGLKGKAAVVTKYTKILELIS 119
           LT+D+   SP PH   +++ V A+   + +  C    + LGL GK A + +  K+   + 
Sbjct: 81  LTYDICEVSPGPHL--NMI-VGANGTGKSSIVC---AICLGLAGKPAFMGRADKVGFFVK 134

Query: 118 QGGWRRIYIVDVYGLSNHL 62
           +G  R +  ++++  S +L
Sbjct: 135 RGCSRGMVEIELFRASGNL 153


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,251,758
Number of Sequences: 237096
Number of extensions: 1277374
Number of successful extensions: 2281
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2281
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3087725076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)