Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6073
         (413 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094716-1|AAM11069.1| 1688|Drosophila melanogaster GH16393p pro...    29   2.4  
AE014297-2048|AAF55199.3| 1537|Drosophila melanogaster CG14869-P...    29   2.4  
AE014297-2047|AAS65157.1| 1688|Drosophila melanogaster CG14869-P...    29   2.4  
AL031863-1|CAA21315.1|  526|Drosophila melanogaster EG:EG0003.1 ...    27   9.8  
AE013599-2369|AAF57936.2|  608|Drosophila melanogaster CG8910-PA...    27   9.8  

>AY094716-1|AAM11069.1| 1688|Drosophila melanogaster GH16393p protein.
          Length = 1688

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
 Frame = +2

Query: 143  ILSYNGCLTLQTQTHYCFTAEIGRAVVPTRA--DSQEVLPPVRAR------ASVSNVPG* 298
            ++S   C  ++ +  +CF +  GR   PTRA  +     PP   R      +S+S+ P  
Sbjct: 1413 VISQCNCEGVEKRRDFCFNSHKGRIACPTRARVERHSCTPPPHCRRRSAIGSSISSRPRG 1472

Query: 299  RPVSSS 316
              VSSS
Sbjct: 1473 TGVSSS 1478


>AE014297-2048|AAF55199.3| 1537|Drosophila melanogaster CG14869-PA,
            isoform A protein.
          Length = 1537

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
 Frame = +2

Query: 143  ILSYNGCLTLQTQTHYCFTAEIGRAVVPTRA--DSQEVLPPVRAR------ASVSNVPG* 298
            ++S   C  ++ +  +CF +  GR   PTRA  +     PP   R      +S+S+ P  
Sbjct: 1262 VISQCNCEGVEKRRDFCFNSHKGRIACPTRARVERHSCTPPPHCRRRSAIGSSISSRPRG 1321

Query: 299  RPVSSS 316
              VSSS
Sbjct: 1322 TGVSSS 1327


>AE014297-2047|AAS65157.1| 1688|Drosophila melanogaster CG14869-PB,
            isoform B protein.
          Length = 1688

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
 Frame = +2

Query: 143  ILSYNGCLTLQTQTHYCFTAEIGRAVVPTRA--DSQEVLPPVRAR------ASVSNVPG* 298
            ++S   C  ++ +  +CF +  GR   PTRA  +     PP   R      +S+S+ P  
Sbjct: 1413 VISQCNCEGVEKRRDFCFNSHKGRIACPTRARVERHSCTPPPHCRRRSAIGSSISSRPRG 1472

Query: 299  RPVSSS 316
              VSSS
Sbjct: 1473 TGVSSS 1478


>AL031863-1|CAA21315.1|  526|Drosophila melanogaster EG:EG0003.1
           protein.
          Length = 526

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 209 GRAVVPTRA-DSQEVLPPVRARASVSNVPG*RPVSSSIRYHRYAIY 343
           GR  V  R  D Q  LPP++   S + VP   PV  S    RY+ Y
Sbjct: 273 GRRHVKNRLMDIQNRLPPIKEFRSPAKVPHPSPVHVSNPRFRYSTY 318


>AE013599-2369|AAF57936.2|  608|Drosophila melanogaster CG8910-PA
           protein.
          Length = 608

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 209 GRAVVPTRA-DSQEVLPPVRARASVSNVPG*RPVSSSIRYHRYAIY 343
           GR  V  R  D Q  LPP++   S + VP   PV  S    RY+ Y
Sbjct: 355 GRRHVKNRLMDIQNRLPPIKEFRSPAKVPHPSPVHVSNPRFRYSTY 400


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,530,603
Number of Sequences: 53049
Number of extensions: 378035
Number of successful extensions: 843
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1230182214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)