Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6070
         (644 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2536|AAF49616.1| 2139|Drosophila melanogaster CG6498-PA...    29   5.4  
AY118875-1|AAM50735.1|  335|Drosophila melanogaster GM30768p pro...    29   7.1  
AE014297-575|AAF54051.1|  608|Drosophila melanogaster CG10055-PA...    29   7.1  
BT003652-1|AAO39656.1|  424|Drosophila melanogaster AT08455p pro...    28   9.4  
AY061027-1|AAL28575.1|  389|Drosophila melanogaster HL05577p pro...    28   9.4  
AE013599-1802|AAG22269.1|  389|Drosophila melanogaster CG13349-P...    28   9.4  
AE013599-1801|AAF58312.1|  389|Drosophila melanogaster CG13349-P...    28   9.4  

>AE014296-2536|AAF49616.1| 2139|Drosophila melanogaster CG6498-PA
            protein.
          Length = 2139

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 617  KSHHSWLRLCSPTCPSETGKAFGPPVISQL 528
            K H+SW R  +PT  ++  K  GPP +S L
Sbjct: 1175 KQHYSWSRHATPT-STDGAKPTGPPPLSSL 1203


>AY118875-1|AAM50735.1|  335|Drosophila melanogaster GM30768p
           protein.
          Length = 335

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -2

Query: 571 VKLERPSGHQ*SLNYKKKKYASS 503
           V+L+ PSGHQ  L YK K Y +S
Sbjct: 262 VELQVPSGHQNPLRYKPKIYETS 284


>AE014297-575|AAF54051.1|  608|Drosophila melanogaster CG10055-PA
           protein.
          Length = 608

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -2

Query: 571 VKLERPSGHQ*SLNYKKKKYASS 503
           V+L+ PSGHQ  L YK K Y +S
Sbjct: 262 VELQVPSGHQNPLRYKPKIYETS 284


>BT003652-1|AAO39656.1|  424|Drosophila melanogaster AT08455p
           protein.
          Length = 424

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 255 FRSSVWSLWFWLWRRKLYKQH*RLRVLSISLTRHPHQHQIGG 380
           F+SS   ++FW+   K  K   + R ++  L   P  HQ GG
Sbjct: 92  FKSSTRRMFFWMQEPKTDKDDEQCRRINELLNNPPSAHQRGG 133


>AY061027-1|AAL28575.1|  389|Drosophila melanogaster HL05577p
           protein.
          Length = 389

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 255 FRSSVWSLWFWLWRRKLYKQH*RLRVLSISLTRHPHQHQIGG 380
           F+SS   ++FW+   K  K   + R ++  L   P  HQ GG
Sbjct: 92  FKSSTRRMFFWMQEPKTDKDDEQCRRINELLNNPPSAHQRGG 133


>AE013599-1802|AAG22269.1|  389|Drosophila melanogaster CG13349-PB,
           isoform B protein.
          Length = 389

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 255 FRSSVWSLWFWLWRRKLYKQH*RLRVLSISLTRHPHQHQIGG 380
           F+SS   ++FW+   K  K   + R ++  L   P  HQ GG
Sbjct: 92  FKSSTRRMFFWMQEPKTDKDDEQCRRINELLNNPPSAHQRGG 133


>AE013599-1801|AAF58312.1|  389|Drosophila melanogaster CG13349-PA,
           isoform A protein.
          Length = 389

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 255 FRSSVWSLWFWLWRRKLYKQH*RLRVLSISLTRHPHQHQIGG 380
           F+SS   ++FW+   K  K   + R ++  L   P  HQ GG
Sbjct: 92  FKSSTRRMFFWMQEPKTDKDDEQCRRINELLNNPPSAHQRGG 133


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,464,292
Number of Sequences: 53049
Number of extensions: 612731
Number of successful extensions: 1618
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1618
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)