Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6065
(772 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0649 - 18402976-18403220,18403305-18404499 64 9e-11
11_04_0234 + 15187065-15188241,15188316-15188494 63 3e-10
04_04_1032 - 30259180-30260519,30260650-30260720,30261099-302621... 31 0.071
01_06_1193 - 35306608-35306777,35306869-35306890,35306988-353069... 34 0.11
09_04_0396 + 17269928-17270344,17270455-17270517,17270635-17270718 31 1.3
10_08_0551 + 18702081-18702251,18702328-18702424,18702533-187026... 30 2.4
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 30 2.4
11_06_0610 - 25449085-25453284 29 5.4
07_01_0577 - 4286048-4286186,4286600-4286660,4286957-4287089,428... 29 5.4
07_01_0251 + 1874148-1874311,1874367-1874429,1874484-1874709,187... 29 5.4
04_04_1125 + 31085106-31085714 29 5.4
01_05_0266 + 20209005-20209137,20209606-20210183 29 5.4
09_02_0328 - 7293547-7293855,7294161-7294274,7294348-7294429,729... 28 7.2
07_01_1217 - 11624586-11624936,11625311-11625424,11625495-116255... 28 7.2
06_03_0071 - 16212450-16212782 28 7.2
02_01_0302 - 2021221-2023305 28 7.2
03_06_0658 - 35335639-35335731,35335814-35335871,35336213-353363... 28 9.5
02_05_0865 - 32329430-32329642,32329735-32330062,32330136-32330590 28 9.5
>04_03_0649 - 18402976-18403220,18403305-18404499
Length = 479
Score = 64.5 bits (150), Expect = 9e-11
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 4/183 (2%)
Frame = +2
Query: 26 YHVPELCQELDAIHVMSYDLRGNWAGFADVHSPLYKRP-HDQWAYEKLNVNDGLNLWEEK 202
Y + + LD ++VM++ LR G A+ ++ + P +D+ ++ + + G+ W +
Sbjct: 216 YPSETVARSLDWVNVMAFGLRP--PGAANANATAFDAPLYDRASH--YSASYGVVSWLDA 271
Query: 203 GCPTNKLVVGIPFYGRSFTLSAGNNNYGLGTYINKEAGGGDPAPYTNATGFWAYYEI--- 373
G P +K+V+GIP YGRS+ L N G+G + G +NATG +Y E+
Sbjct: 272 GVPASKVVMGIPLYGRSWFL-RNKANSGVGAPV---VAAGPKQRGSNATGAMSYAEVQWL 327
Query: 374 CTEVDADGSGWTKKWDEFGKCPYAYKGTQWVGYEDPRSVEIKMNWIKEKGYLGAMTWAID 553
+D Y G WV ++ V K+ + G LG W ++
Sbjct: 328 AATATRGSRAVITAYDNASVASYVSVGDVWVAFDGVAVVAEKLAFAARCGLLGYFLWPVN 387
Query: 554 MDD 562
DD
Sbjct: 388 YDD 390
>11_04_0234 + 15187065-15188241,15188316-15188494
Length = 451
Score = 62.9 bits (146), Expect = 3e-10
Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 1/180 (0%)
Frame = +2
Query: 26 YHVPELCQELDAIHVMSYDLRGNWAGFADVHSPLY-KRPHDQWAYEKLNVNDGLNLWEEK 202
Y + ++ LD ++++++ L N + +PLY K H +Y G+ W +
Sbjct: 219 YPIDDMSSSLDWVNIITFSLHKN-SNVTTADAPLYDKDSHFSASY-------GVISWLDA 270
Query: 203 GCPTNKLVVGIPFYGRSFTLSAGNNNYGLGTYINKEAGGGDPAPYTNATGFWAYYEICTE 382
G P KLV+GIP +GRS+ L + N GLG A G +N G AY EI
Sbjct: 271 GLPPCKLVMGIPLFGRSWFLRNKDKN-GLGA---PTAAAGTKQRKSNQIGVIAYAEIEEY 326
Query: 383 VDADGSGWTKKWDEFGKCPYAYKGTQWVGYEDPRSVEIKMNWIKEKGYLGAMTWAIDMDD 562
+ + T D Y Y G WV ++ V+ K+ ++ + LG I DD
Sbjct: 327 LKSQSVFVTH--DNQSVADYFYSGDLWVSFDSAVVVQEKVEFVAKSQLLGYFLSTISFDD 384
>04_04_1032 -
30259180-30260519,30260650-30260720,30261099-30262118,
30263886-30264121
Length = 888
Score = 31.1 bits (67), Expect(2) = 0.071
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 497 KMNWIKEKGYLGAMTWAIDMDDFKGLCGEENPLIKLLHK 613
+ N+ + GY+G M + +D++ G GE PL+ L+ +
Sbjct: 649 RQNYSSQLGYMGPMLFNVDLNVQAGYQGEHVPLVSLMSR 687
Score = 22.6 bits (46), Expect(2) = 0.071
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 620 STYTVPPARTGHTTPTPEWARPPSTPSDPSEGD 718
ST P RTG T P R ST +GD
Sbjct: 722 STSASPAWRTGRRTAMPRIPRSNSTRVTLDDGD 754
>01_06_1193 -
35306608-35306777,35306869-35306890,35306988-35306996,
35307107-35307115,35307470-35307491,35307981-35308784,
35308861-35309088,35309250-35309335,35309449-35309530,
35309630-35309778,35309992-35310105,35310961-35311059,
35311243-35311321,35311873-35312021
Length = 673
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 581 EENPLIKLLHKHMSTYTVPPARTGHTTPTPEWARPPSTPSDP 706
+ +P+ + + Y P A++G P P WA PPS S+P
Sbjct: 437 QSHPINQEYIRQNRNYVAPWAQSGQYYPAPPWAAPPSVNSNP 478
>09_04_0396 + 17269928-17270344,17270455-17270517,17270635-17270718
Length = 187
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 587 NPLIKLLHKHMSTYTVPPARTGHTTPTPEWARPPSTP-SDPS 709
NP + L + + P A T TP+W RP + P +DPS
Sbjct: 16 NPSLPLPRRARRPHPPPAANTTGAASTPDWFRPRAPPDADPS 57
>10_08_0551 +
18702081-18702251,18702328-18702424,18702533-18702651,
18702757-18702924,18703296-18703424,18703659-18703719,
18703813-18703916,18704173-18704279,18704319-18704493,
18704657-18704770,18704883-18704966,18705536-18705608,
18705689-18705775,18705863-18705917,18706007-18706078,
18706470-18706532,18706640-18706754,18706844-18706915
Length = 621
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = -1
Query: 211 RATLLFP*IKTIIHVKFLVGPLVVRAFV*RRMHIGETGPITAQIIRH--HVDSVQFLT-Q 41
R +LFP I +I H+ VG VVRA V + G + A+ ++ D+V F+ +
Sbjct: 550 RKGILFPSISSIRHITARVGAAVVRAAVDEDLAEGRC-DVDARDLKSMTEADTVDFVARK 608
Query: 40 LWYMI 26
+WY I
Sbjct: 609 MWYPI 613
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 626 YTVPPARTGHTTPTPEWARPPSTPSDP 706
+T PP+ + P+P+++ PSTP+ P
Sbjct: 38 WTPPPSTASPSPPSPDFSSDPSTPATP 64
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 635 PPARTGHTTPTPEWARPPSTPSDPS 709
PPA GHT P+P + PPS S P+
Sbjct: 630 PPAPEGHT-PSPPESTPPSEKSPPT 653
>07_01_0577 -
4286048-4286186,4286600-4286660,4286957-4287089,
4287286-4287350,4288346-4288451,4288529-4288750,
4289619-4289852,4289948-4290037,4290605-4291507
Length = 650
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 623 TYTVPPARTGHTTPTPEWARPPSTPSDPSEGD 718
T +PPA T T P P + PST P+ D
Sbjct: 69 TLPIPPASTPPTPPQPSASTEPSTAPPPAVDD 100
>07_01_0251 +
1874148-1874311,1874367-1874429,1874484-1874709,
1874830-1875081,1875158-1875267,1875720-1875815,
1875898-1875985,1876246-1876475,1876745-1876929,
1877136-1877335,1877592-1877924,1878058-1878159,
1878869-1879166,1879626-1879774,1879859-1880143,
1880531-1880728
Length = 992
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +1
Query: 241 LWTFIHFICWKQQLWPWNLHQQRGWWWRPCSLYKRNWILGLL*NLH 378
L TF+ +IC K L W L Q+R ++ L W+ GL LH
Sbjct: 477 LHTFMRYICHKSWLGGWFLPQKRSYF--ALKLPNGWWVFGLDQALH 520
>04_04_1125 + 31085106-31085714
Length = 202
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 635 PPARTGHTTPTPEWARPPSTPSDPS 709
P T T PTP W PP+TP+ P+
Sbjct: 51 PTPATPTTPPTP-WTPPPATPTPPT 74
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
Frame = +2
Query: 626 YTVPPARTGHTTPTPEW----ARPPSTPSDPS 709
+T PPA TPTP W A PP TP+ P+
Sbjct: 63 WTPPPATPTPPTPTP-WTPTPATPPPTPATPA 93
>01_05_0266 + 20209005-20209137,20209606-20210183
Length = 236
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 568 GTMRRGKSLDQASA*AYEHLHSTACAHWTHNSYSGMGASTFNS 696
G+ RG++ + A A LHS A G+GA+TF S
Sbjct: 135 GSAGRGRASGRGGAEASSALHSLAARFAGRGGMGGLGATTFGS 177
>09_02_0328 -
7293547-7293855,7294161-7294274,7294348-7294429,
7295318-7295401,7296199-7296399,7296516-7296853,
7296968-7297084
Length = 414
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +2
Query: 398 SGWTKKWDEFGKCPYAYKGTQWVGYEDPRSVEIKMNWIKEKGYLGA 535
+G K W K KG V YEDP + + W K + G+
Sbjct: 44 TGRPKIWIYRDKVTNEPKGDATVTYEDPHAASAAVEWFNNKDFHGS 89
>07_01_1217 -
11624586-11624936,11625311-11625424,11625495-11625576,
11626762-11626845,11627430-11627639,11627756-11628099,
11628215-11628331
Length = 433
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +2
Query: 398 SGWTKKWDEFGKCPYAYKGTQWVGYEDPRSVEIKMNWIKEKGYLGA 535
+G K W K KG V YEDP + + W K + G+
Sbjct: 44 TGRPKIWIYRDKVTNEPKGDATVTYEDPHAASAAVEWFNNKDFHGS 89
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 454 NSMGGLRRSS*CGDQDELDQGEGLPRG 534
++ L S+ G QDELD GEG RG
Sbjct: 107 SATASLNNSAELGGQDELDNGEGRGRG 133
>06_03_0071 - 16212450-16212782
Length = 110
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +1
Query: 520 GLPRGYDMGYRYGRF*G--TMRRGKSLDQASA*AYEHLHSTACAHW 651
GLP GY GR G T+ K A+A A EH C HW
Sbjct: 25 GLPLELIAGYARGRAKGAVTVAVAKPTPAATAVAVEHTKHGNCLHW 70
>02_01_0302 - 2021221-2023305
Length = 694
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 608 HKHMSTYTVPPARTGHTTPTPEWARPPSTPSDPSEG 715
H H ST P + H PTP PPS S G
Sbjct: 621 HSHPSTPPSPSGPSFHPPPTPHNCSPPSHGSSTGGG 656
>03_06_0658 -
35335639-35335731,35335814-35335871,35336213-35336355,
35336624-35336703,35336916-35337075,35337531-35337668,
35338487-35338567,35338640-35338693,35339192-35339297,
35339615-35339682,35340076-35340225,35340401-35340519,
35341151-35341362,35342118-35342205,35342365-35342479,
35343083-35343274,35343809-35344018
Length = 688
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 113 VHSPLYKRPHDQWAYEKLNVNDGLNLWEEKGCPTNKLVVGIPFY 244
V SP + + ++N + LW EK C +++V GIP Y
Sbjct: 207 VDSPQFFNRLAESFISRINARFIVLLWGEKSCLNSEVVNGIPLY 250
>02_05_0865 - 32329430-32329642,32329735-32330062,32330136-32330590
Length = 331
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 559 VHIYSPCHSPEVALLLDPVHLDLHTTRIFVAHPLSSL 449
++ Y PC PE+ L + P H D+ T + V + + L
Sbjct: 199 INFYPPCPEPELTLGVAP-HTDMSTFTVLVPNDVQGL 234
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,729,327
Number of Sequences: 37544
Number of extensions: 580658
Number of successful extensions: 1896
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1887
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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