Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6065
(772 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 140 1e-33
Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical pr... 60 1e-10
AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical ... 63 2e-10
AC084153-14|AAK84588.1| 264|Caenorhabditis elegans Hypothetical... 62 6e-10
U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z70035-9|CAA93870.2| 450|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z78412-8|CAB01653.1| 400|Caenorhabditis elegans Hypothetical pr... 41 8e-04
U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr... 40 0.003
AF098997-6|AAC68716.1| 410|Caenorhabditis elegans Hypothetical ... 40 0.003
Z70035-3|CAA93863.1| 435|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z54342-3|CAA91154.1| 394|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z70035-8|CAA93868.2| 446|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z70035-6|CAA93866.1| 444|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z78542-2|CAB01744.2| 641|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z50874-6|CAA90765.1| 759|Caenorhabditis elegans Hypothetical pr... 28 6.4
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 28 6.4
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 28 6.4
Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical pr... 28 8.5
U67951-5|AAB07574.2| 778|Caenorhabditis elegans Degeneration of... 28 8.5
U61950-2|AAC24286.1| 266|Caenorhabditis elegans Hypothetical pr... 28 8.5
L34414-1|AAA99524.1| 778|Caenorhabditis elegans degenerin protein. 28 8.5
AL132863-1|CAB60573.1| 477|Caenorhabditis elegans Hypothetical ... 28 8.5
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 140 bits (339), Expect = 1e-33
Identities = 79/221 (35%), Positives = 106/221 (47%), Gaps = 6/221 (2%)
Frame = +2
Query: 23 GYHVPELCQELDAIHVMSYDLRGNWAGFADVHSPLYKRPHDQWAYEKLNVNDGLNLWEEK 202
GY +P L D I +MSYD G WA +SPLY + NV+ W +K
Sbjct: 229 GYDIPNLAPNFDFILLMSYDFFGAWASLVGFNSPLYATTELPAEWNGWNVDSSARYWNQK 288
Query: 203 GCPTNKLVVGIPFYGRSFTLSAGNNNYGLGTYINKEAGGGDP--APYTNATGFWAYYEIC 376
G P K++VG+P YGR +TL NN + IN G Y G AY+E C
Sbjct: 289 GMPKEKIIVGMPTYGRGWTL---NN----ASAINPGTSGSPAKITQYVQEAGVGAYFEFC 341
Query: 377 TEVDADGSGWTKKWDEFGKCPYAYKGTQWVGYEDPRSVEIKMNWIKEKGYLGAMTWAIDM 556
E+ A+G+ T+ WD + PY +G QW Y+D S KM ++K +GY GA W +D
Sbjct: 342 -EMLANGA--TRYWDSQSQVPYLVQGNQWWSYDDEESFANKMAYVKREGYGGAFVWTLDF 398
Query: 557 DDFKGLCGEEN----PLIKLLHKHMSTYTVPPARTGHTTPT 667
DDF C N PLI ++ K + +P T PT
Sbjct: 399 DDFNAGCSNSNGQLYPLISVIAKELGGVIIPKKGGVTTAPT 439
>Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical
protein T13H5.3 protein.
Length = 626
Score = 60.5 bits (140), Expect(2) = 1e-10
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 6/192 (3%)
Frame = +2
Query: 14 LMEGYHVPELCQELDAIHVMSYDLRGNWAG----FADVHSPLYKRPHDQWAYEKLNVNDG 181
L GY + +L + D ++VMSYD G WA + +PL +++ ++NV+
Sbjct: 196 LKPGYDLQQLMKYCDFVNVMSYDYFGAWASKWGAYTGPPAPLQFAMPKKFS-GRMNVHAT 254
Query: 182 LNLWEEKGCPTNKLVVGIPFYGRSFTLSAGNNNYGLGTYINKEAGGGDPAPYTNATGFWA 361
+ + + T+K+ +G+PFYGR + N G + A + T F
Sbjct: 255 MKDYSCQIKATDKINMGVPFYGRFW------KNVGDAVDSTDDMWRTATATNSEGTKFEG 308
Query: 362 YYEICTEVDADGSGWTKKWDEFGKCPYAYKGTQ--WVGYEDPRSVEIKMNWIKEKGYLGA 535
++ K+ K P+ + Q +VGYE+ S++ K+++I E G
Sbjct: 309 GDVQWRDLHEKFDTTKTKFHSGSKTPFIWLSEQKTFVGYENAESLKHKVDYIVENNIGGV 368
Query: 536 MTWAIDMDDFKG 571
M WAID DD +G
Sbjct: 369 MIWAIDFDDDQG 380
Score = 23.0 bits (47), Expect(2) = 1e-10
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +2
Query: 551 DMDDFKGLCGEENPLI 598
D ++ G+CG+ +PLI
Sbjct: 416 DNEELAGMCGKSSPLI 431
>AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical
protein F07G11.9 protein.
Length = 2025
Score = 62.9 bits (146), Expect = 2e-10
Identities = 51/194 (26%), Positives = 87/194 (44%), Gaps = 9/194 (4%)
Frame = +2
Query: 8 FRLMEGYHVPELCQELDAIHVMSYDLRG----NWAGFADVHSPLYKRPHDQWAYEKLNVN 175
+ L +GY + + + D I+VM+YD G W + +PLY ++ KLN +
Sbjct: 1663 WNLRKGYDLKGILKYADFINVMTYDYYGAWESKWGAYTGTPAPLYFGSLKGFS-GKLNAD 1721
Query: 176 DGLNLWEEKGCPTNKLVVGIPFYGRSFTLSAGNNNYGLGTYINKEAGGGDPAPYTNATGF 355
+ + K ++L +G+PFYGR + G + + G Y G+
Sbjct: 1722 FSMKFYACKTEKPSQLNMGVPFYGRYWKNVLGPIDKSDNMWRTAAPQNGK---YEG--GY 1776
Query: 356 WAYYEICTEVDADGSGWTK---KWDEFGKCPYAYKG--TQWVGYEDPRSVEIKMNWIKEK 520
+ + E GW K W E K PY +++G+E+ RS++ KM + ++
Sbjct: 1777 VGWRNLAKE------GWNKGSASWHEKTKTPYIMNNGAKKFLGFENERSLKEKMKYATDR 1830
Query: 521 GYLGAMTWAIDMDD 562
G M WA+D+DD
Sbjct: 1831 NLGGLMIWALDLDD 1844
>AC084153-14|AAK84588.1| 264|Caenorhabditis elegans Hypothetical
protein Y22D7AL.14 protein.
Length = 264
Score = 61.7 bits (143), Expect = 6e-10
Identities = 53/205 (25%), Positives = 86/205 (41%), Gaps = 7/205 (3%)
Frame = +2
Query: 20 EGYHVPELCQELDAIHVMSYDLR--GNWAG-FADVHSPLYKRPHDQWAYEKLNVNDGLNL 190
+ Y V L D + +M+YD ++ F ++PL+ + ++N +
Sbjct: 72 KAYDVDALKMYADMVQIMNYDFHVFNRYSNPFVGFNAPLHPMRAEISVLGEMNAEASMKT 131
Query: 191 WEEKGCPTNKLVVGIPFYGRSFTLSAGNNNYGLGTYINKEAGGGDPA--PYTNATGFWAY 364
W + G P N GIP Y R+F L L Y++K A TN
Sbjct: 132 WYDLGLPRNISFFGIPTYARAFQL--------LTHYLHKPYSPAIRARPEITNLP----- 178
Query: 365 YEICTEVDADGSGWTKKWDEFGKCPYAYKGTQ-WVGYEDPRSVEIKMNWIKEKGYLGAMT 541
++C + A +T W+ + PY Y WV YE+ +S+ KM + ++ G M
Sbjct: 179 -DVC--IFAQSGYYTTVWNHHAQAPYLYGDDGIWVSYENQQSILAKMAFARKLQVGGVMV 235
Query: 542 WAIDMDDFKGLCGE-ENPLIKLLHK 613
++I DD G CG PL+ + K
Sbjct: 236 FSIGSDDVTGKCGHGPYPLLTKISK 260
>U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical protein
T01C4.1 protein.
Length = 1484
Score = 60.5 bits (140), Expect = 1e-09
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 14/199 (7%)
Frame = +2
Query: 8 FRLMEGYHVPELCQELDAIHVMSYDLRG----NWAGFADVHSPLYKRPHDQWAYEKLNVN 175
+ L EGY + + D I+VM+YD G W + +PLY ++ KLN +
Sbjct: 1126 WNLREGYDLKGILNYADFINVMTYDYYGAWESKWGAYTGTPAPLYFGSLKGFS-GKLNAD 1184
Query: 176 DGLNLWEEKGCPTNKLVVGIPFYGRSF-----TLSAGNNNYGLGTYINKEAGGGDPAPYT 340
+ + ++L +G+PFYGR + + A +N + N + GG Y
Sbjct: 1185 FSMKFYACNTKKPSQLTMGVPFYGRYWKNVLEPIDASDNMWRTAAPQNGKYEGG----YV 1240
Query: 341 NATGFWAYYEICTEVDADGSGWTK---KWDEFGKCPYAYK--GTQWVGYEDPRSVEIKMN 505
W + + GW K W + K PY ++G+E+ RS++ KM+
Sbjct: 1241 G----WR--------NLEKEGWNKGSATWHKKTKTPYIMNNGARMFLGFENERSLKEKMD 1288
Query: 506 WIKEKGYLGAMTWAIDMDD 562
+ + G M WA+D+DD
Sbjct: 1289 YATNRNLGGLMIWALDLDD 1307
>Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.1 protein.
Length = 432
Score = 46.0 bits (104), Expect = 3e-05
Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 8/188 (4%)
Frame = +2
Query: 23 GYHVPELCQELDAIHVMSYDLRGNWAG-FADVHSPLYKRPHDQWAYEKLNVNDGLNLWEE 199
GY + E+ +D ++V S D G W + P ++ + V+ + +
Sbjct: 230 GYDLDEIIDHIDFMNVYSMDYSGPWDNKWGTPTGPSAPMNYNIGPRKHFTVDWTMKYYAC 289
Query: 200 KGCPTNKLVVGIPFYGRSFTLSAGNNNYGLGTYINKEA----GGGDPAPYTNATGFWAYY 367
K NK + IPFY R + S G L T + + A G D PY +
Sbjct: 290 KTRQPNKFNIVIPFYARIWR-SVGEA-ITLKTEVFRNAKLINGKADGDPYISRLS----- 342
Query: 368 EICTEVDADGSG-WTKKWDEFGKCPYAYKGTQ--WVGYEDPRSVEIKMNWIKEKGYLGAM 538
V G + WD K Y +K + ++ +E+ RS+E K+ ++ E G
Sbjct: 343 -----VKQKGIELFPYSWDNATKSSYIWKPKEKTFLTFENERSIEKKLQYVNEMNLGGVW 397
Query: 539 TWAIDMDD 562
W++DMDD
Sbjct: 398 IWSVDMDD 405
>Z70035-9|CAA93870.2| 450|Caenorhabditis elegans Hypothetical
protein R09D1.10 protein.
Length = 450
Score = 44.4 bits (100), Expect = 9e-05
Identities = 42/199 (21%), Positives = 80/199 (40%), Gaps = 4/199 (2%)
Frame = +2
Query: 26 YHVPELCQELDAIHVMSYDLRGNWAG-FADVHSPLYKRPHDQWAYEKLNVNDGLNLWEEK 202
+ + + D I++ S D G W + + P+ + E NV+ + K
Sbjct: 239 FDIENIVAVADFINIYSMDYYGPWKNPYGNPTGPISPIYNGAQGREAYNVHSSALTYSCK 298
Query: 203 GCPTNKLVVGIPFYGRSF-TLSAGNNNYGLGTYINKEAGGGDPAPYTNATGFWAYYEICT 379
+ K + IPF+ R + + + G Y N G F + +
Sbjct: 299 VKQSKKFNIVIPFFARLWKNVEKPIQHPGREVYRNVHLVHGSAV----GESFMSRKSVLE 354
Query: 380 EVDADGSGWTKKWDEFGKCPYAYKGT--QWVGYEDPRSVEIKMNWIKEKGYLGAMTWAID 553
+ S +DE + + Y T +++ +E +S+E K+N++K++ G W +D
Sbjct: 355 KGYKLNS---YSYDELSRSAFIYNSTTKEYLTFETEKSIEAKVNYVKDRALAGVWIWFVD 411
Query: 554 MDDFKGLCGEENPLIKLLH 610
+DD EEN LI ++
Sbjct: 412 LDD------EENSLINAVN 424
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 44.0 bits (99), Expect = 1e-04
Identities = 47/194 (24%), Positives = 79/194 (40%), Gaps = 5/194 (2%)
Frame = +2
Query: 5 NFRLMEGYHVPELCQELDAIHVMSYDLRGNWAGFADVHS-PLYKRPHDQWAYEKLNVNDG 181
NF + G+ + E+ + +D ++V S D G WA V + P A + NV+
Sbjct: 213 NFEM--GFDLDEIIEHVDFLNVHSMDFAGPWANQYGVPTGPSAPMCGGFGARKNFNVHHT 270
Query: 182 LNLWEEKGCPTNKLVVGIPFYGRSFTLSAGNNNYGLGTYINKEAGGGDPA--PYTNATGF 355
+ + EK +KL + IPFY R + + + + N + G PY +
Sbjct: 271 MKYYVEKIEDPSKLNLVIPFYARRWEHVKESLDSNTEVFRNADLVNGIAVGEPYISR--- 327
Query: 356 WAYYEICTEVDADGSGWTKKWDEFGKCPYAYKGTQ--WVGYEDPRSVEIKMNWIKEKGYL 529
W+ E S + WD K + + + +V E RS+ K ++ +
Sbjct: 328 WS-----AEKTHGLSLGSTNWDTETKTSFLWDKNKNTFVTLESDRSIREKKKYVCDMKLG 382
Query: 530 GAMTWAIDMDDFKG 571
G W +DMDD G
Sbjct: 383 GVWIWTVDMDDSAG 396
Score = 38.3 bits (85), Expect = 0.006
Identities = 44/184 (23%), Positives = 70/184 (38%), Gaps = 2/184 (1%)
Frame = +2
Query: 17 MEGYHVPELCQELDAIHVMSYDLRGNWAGFADVHSPLYKRPHDQWAYEKLNVNDGLNLWE 196
M+ Y++ ++ + +D I+V S + + G PLY Q + + DG
Sbjct: 629 MQNYNLDDIPEHVDYINVYSMEKFSSLIG----PLPLYSGHEPQINFNVARIMDGYTSNN 684
Query: 197 EKGCPTNKLVVGIPFYGRSFTLSAGNNNYGLGTYINKEAGGGDPAPYTNATGFWAYYEIC 376
EK K +GI F + + G +I+ + G G W
Sbjct: 685 EKHA--KKFNLGILFSAKLWKNVEEPAENGRDLFIHADKGATMSRSIAKKKG-WRL---- 737
Query: 377 TEVDADGSGWTKKWDEFGKCPYAY--KGTQWVGYEDPRSVEIKMNWIKEKGYLGAMTWAI 550
T D WDE K Y + + + + +E RS+ K +IK G WA+
Sbjct: 738 TSAD---------WDETTKTSYIWNPETKELLTFETDRSINEKTKYIKRVNIGGVCLWAV 788
Query: 551 DMDD 562
DMDD
Sbjct: 789 DMDD 792
>Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical
protein M01B2.6 protein.
Length = 450
Score = 43.6 bits (98), Expect = 2e-04
Identities = 39/184 (21%), Positives = 81/184 (44%), Gaps = 4/184 (2%)
Frame = +2
Query: 23 GYHVPELCQELDAIHVMSYDLRGNWA-GFADVHSPLYKRPHDQWAYEKLNVNDGLNLWEE 199
G+ + E+ + +D I++ + D G WA G+ + P+ E+ NV++ ++
Sbjct: 245 GFKMNEIVENVDFINIFAMDYYGPWASGWGNPTGPISPIYGGSERREQWNVDNTAAIYSC 304
Query: 200 KGCPTNKLVVGIPFYGRSFTLSAGNNNYGLGT-YINKEAGGGDPAPYTNATGFWAYYEIC 376
+ ++K + IPF+ R + NN G + KE A G Y
Sbjct: 305 ETMRSSKFNIVIPFFARLW------NNVGKPIDFPGKEVYRNVTLIDGKAVGE-VYMPRR 357
Query: 377 TEVDADGSGWTKKWDEFGKCPYAYKGT--QWVGYEDPRSVEIKMNWIKEKGYLGAMTWAI 550
+ + + + +D+ + + Y T +++ +E RS+ K+++++ G W +
Sbjct: 358 SALQKGYNLSSYNYDDLSETAFIYNSTTKEYLTFEVKRSIAAKLDYVQNMNLGGVWIWQM 417
Query: 551 DMDD 562
DMDD
Sbjct: 418 DMDD 421
>Z78412-8|CAB01653.1| 400|Caenorhabditis elegans Hypothetical
protein M176.8 protein.
Length = 400
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 416 WDEFGKCPYAY--KGTQWVGYEDPRSVEIKMNWIKEKGYLGAMTWAIDMDD 562
WD PY K ++ +ED RS++IK ++ K+ G W++DMDD
Sbjct: 323 WDNLTMTPYILDLKAKTFLTFEDKRSIKIKTDYAKKMDLGGVWLWSVDMDD 373
>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical
protein C25A8.4 protein.
Length = 1067
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +2
Query: 368 EICTEVDADGSGWTKKWDEFGKCPYAYKGTQWVGYEDPRSVEIKMNWIKEKGYLGAMTWA 547
EIC + + G+G T W + + PY + Q V YE+ RS IK W +G G
Sbjct: 641 EICESLKS-GTGVTH-WVDGAEVPYLRRYDQMVAYENTRSAHIKAVWASMEGVGGLALHN 698
Query: 548 IDMDDFKGLCGEEN--PLIKLLHK 613
+ DD +C P++ L +
Sbjct: 699 MHQDDPSAVCDNRTAFPILNALSR 722
>AF098997-6|AAC68716.1| 410|Caenorhabditis elegans Hypothetical
protein T10D4.3 protein.
Length = 410
Score = 39.5 bits (88), Expect = 0.003
Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 3/183 (1%)
Frame = +2
Query: 23 GYHVPELCQELDAIHVMSYDLRGNWAG-FADVHSPLYKRPHDQWAYEKLNVNDGLNLWEE 199
GY + + +D +V S D G W + P+ + + NV+ L + E
Sbjct: 209 GYDLRTISSHVDFFNVHSMDYYGPWPNEWGKPTGPI----SPLYGPTRHNVDWTLRYYAE 264
Query: 200 KGCPTNKLVVGIPFYGRSFTLSAGNNNYGLGTYINKEAGGGDPAPYTNATGFWAYYEICT 379
K KL + IPF+ R + G + + E P + + A +E
Sbjct: 265 KTGEPGKLNMVIPFFVRLWKNVPEPVEPGRQVFRDVELVDNKPQGEAYMSRWSAQHE--- 321
Query: 380 EVDADGSGWTKKWDEFGKCPYAYKGT--QWVGYEDPRSVEIKMNWIKEKGYLGAMTWAID 553
E+D + W DE + Y + +V +E +S++ KM ++KEK G W +D
Sbjct: 322 ELDLSPADW----DEETRSSYTWNPDTRNFVTFETDKSIQEKMKYVKEKNLGGVWIWHVD 377
Query: 554 MDD 562
++
Sbjct: 378 ANE 380
>Z70035-3|CAA93863.1| 435|Caenorhabditis elegans Hypothetical
protein R09D1.3 protein.
Length = 435
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +2
Query: 410 KKWDEFGKCPYAY--KGTQWVGYEDPRSVEIKMNWIKEKGYLGAMTWAIDMDD 562
+ WD + PY K + YE+ +S+++K++++ + G W++DMDD
Sbjct: 356 ESWDNATQTPYVLDLKTRTFFTYENEKSIKVKLDYVNKMDLGGVWIWSVDMDD 408
>Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical protein
F15A4.8a protein.
Length = 755
Score = 38.3 bits (85), Expect = 0.006
Identities = 44/184 (23%), Positives = 70/184 (38%), Gaps = 2/184 (1%)
Frame = +2
Query: 17 MEGYHVPELCQELDAIHVMSYDLRGNWAGFADVHSPLYKRPHDQWAYEKLNVNDGLNLWE 196
M+ Y++ ++ + +D I+V S + + G PLY Q + + DG
Sbjct: 576 MQNYNLDDIPEHVDYINVYSMEKFSSLIG----PLPLYSGHEPQINFNVARIMDGYTSNN 631
Query: 197 EKGCPTNKLVVGIPFYGRSFTLSAGNNNYGLGTYINKEAGGGDPAPYTNATGFWAYYEIC 376
EK K +GI F + + G +I+ + G G W
Sbjct: 632 EKHA--KKFNLGILFSAKLWKNVEEPAENGRDLFIHADKGATMSRSIAKKKG-WRL---- 684
Query: 377 TEVDADGSGWTKKWDEFGKCPYAY--KGTQWVGYEDPRSVEIKMNWIKEKGYLGAMTWAI 550
T D WDE K Y + + + + +E RS+ K +IK G WA+
Sbjct: 685 TSAD---------WDETTKTSYIWNPETKELLTFETDRSINEKTKYIKRVNIGGVCLWAV 735
Query: 551 DMDD 562
DMDD
Sbjct: 736 DMDD 739
Score = 31.9 bits (69), Expect = 0.52
Identities = 39/169 (23%), Positives = 60/169 (35%), Gaps = 4/169 (2%)
Frame = +2
Query: 206 CPTNKLVVGIPFYGRSFTLSAGNNNYGLGTYINKEAGGGDPA--PYTNATGFWAYYEICT 379
C +KL + IPFY R + + + + N + G PY + W+
Sbjct: 256 CDPSKLNLVIPFYARRWEHVKESLDSNTEVFRNADLVNGIAVGEPYISR---WS-----A 307
Query: 380 EVDADGSGWTKKWDEFGKCPYAYKGTQ--WVGYEDPRSVEIKMNWIKEKGYLGAMTWAID 553
E S + WD K + + + +V E RS+ K ++ + G W +D
Sbjct: 308 EKTHGLSLGSTNWDTETKTSFLWDKNKNTFVTLESDRSIREKKKYVCDMKLGGVWIWTVD 367
Query: 554 MDDFKGLCGEENPLIKLLHKHMSTYTVPPARTGHTTPTPEWARPPSTPS 700
MDD G + ST T P + T P P T S
Sbjct: 368 MDDSAGSLLNAS---SARPNVTSTTTAPTTESSTTPPVESTTTAPVTKS 413
>Z54342-3|CAA91154.1| 394|Caenorhabditis elegans Hypothetical
protein C08H9.6 protein.
Length = 394
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +2
Query: 413 KWDEFGKCPYAY--KGTQWVGYEDPRSVEIKMNWIKEKGYLGAMTWAIDMDD 562
+W + K YA+ K ++ +E+ +S+ K+ +++ K G + W +D DD
Sbjct: 305 QWHDSSKSSYAWDPKSKIFLAFENEKSLSEKVIYVRNKNIGGLVIWNVDQDD 356
>Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical
protein R09D1.4 protein.
Length = 410
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 416 WDEFGKCPYAYKGTQ--WVGYEDPRSVEIKMNWIKEKGYLGAMTWAIDMDD 562
WD + Y + ++ +E +S+ K+ ++ K G W++DMDD
Sbjct: 327 WDTLTETSSMYNNSTKTFLAFETEKSIHAKIEYVMNKNLGGVWIWSVDMDD 377
Score = 32.3 bits (70), Expect = 0.39
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +2
Query: 23 GYHVPELCQELDAIHVMSYDLRGNWAGFADVHSPLYKRPHDQWAYEKLNVNDGLNLWEEK 202
GY +P++ + +D ++V + D G G SPLY D +KLNV D EE
Sbjct: 252 GYSIPDILKYVDFVNVFTMDYYGPSDGSTGPLSPLYSGHLD----KKLNVADADENSEES 307
Query: 203 GCPTNKLV 226
+ K V
Sbjct: 308 AYMSRKTV 315
>Z70035-8|CAA93868.2| 446|Caenorhabditis elegans Hypothetical
protein R09D1.8 protein.
Length = 446
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 431 KCPYAYKGTQ--WVGYEDPRSVEIKMNWIKEKGYLGAMTWAIDMDD 562
+ + Y T ++ +E ++ K++++K++ G WA+DMDD
Sbjct: 376 RAAFKYNATTETFLTFETNDTIAAKIDYVKDRILGGVWIWAVDMDD 421
>Z70035-6|CAA93866.1| 444|Caenorhabditis elegans Hypothetical
protein R09D1.6 protein.
Length = 444
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 431 KCPYAYKGTQ--WVGYEDPRSVEIKMNWIKEKGYLGAMTWAIDMDD 562
+ + Y T ++ +E ++ K++++K++ G WA+DMDD
Sbjct: 374 RAAFKYNATTETFLTFETNDTIAAKIDYVKDRILGGVWIWAVDMDD 419
>Z78542-2|CAB01744.2| 641|Caenorhabditis elegans Hypothetical
protein F20D1.2 protein.
Length = 641
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +2
Query: 8 FRLMEGYHVPELCQELDAIHVMSYDLRGNWAGFADVHSPLYKRPHDQWAYEKLNVNDG 181
FRL+ YH P++ L+++H NW S + H+ W KL + G
Sbjct: 155 FRLLLQYHDPQISNHLESLHCSPSMYTKNWFATLFSSSMSTESCHELW---KLYIEQG 209
>Z50874-6|CAA90765.1| 759|Caenorhabditis elegans Hypothetical
protein R10E4.4 protein.
Length = 759
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +2
Query: 566 KGLCGEENPLIKLLHKHMSTYTVPPARTGHTTPTPEWAR 682
K L G P +++L HM T P RT TT TPE R
Sbjct: 283 KSLQGIRTPYLRVLGIHMETSG--PGRTNFTTFTPEEER 319
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 28.3 bits (60), Expect = 6.4
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +2
Query: 392 DGSGWTKKWDEFGKCPYAYKGTQW 463
+ SGW W + G PY G W
Sbjct: 213 NNSGWYAGWGQIGAMPYGATGAAW 236
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 28.3 bits (60), Expect = 6.4
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +2
Query: 392 DGSGWTKKWDEFGKCPYAYKGTQW 463
+ SGW W + G PY G W
Sbjct: 213 NNSGWYAGWGQIGAMPYGATGAAW 236
>Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical
protein R09D1.7 protein.
Length = 369
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/46 (23%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 431 KCPYAYKGTQ--WVGYEDPRSVEIKMNWIKEKGYLGAMTWAIDMDD 562
+ + Y T ++ +E ++ K++++K++ G W +DMDD
Sbjct: 299 RAAFKYNATTETFLTFETNDTIAAKIDYVKDRILGGVWIWGVDMDD 344
>U67951-5|AAB07574.2| 778|Caenorhabditis elegans Degeneration of
certain neuronsprotein 1 protein.
Length = 778
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 620 STYTVPPARTGHTTPTPEWARPPSTPSDPSE 712
+T T PP T TT T PP+T + P++
Sbjct: 351 TTTTTPPPTTTSTTTTTTTTPPPTTTARPNQ 381
>U61950-2|AAC24286.1| 266|Caenorhabditis elegans Hypothetical
protein C45E5.3 protein.
Length = 266
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 14 LMEGYHVPELCQELDAIHVMSYDLRGNW 97
L +GY + E+ + +D ++V S D G W
Sbjct: 102 LEDGYDIEEIIRHVDFVNVYSMDYAGPW 129
>L34414-1|AAA99524.1| 778|Caenorhabditis elegans degenerin protein.
Length = 778
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 620 STYTVPPARTGHTTPTPEWARPPSTPSDPSE 712
+T T PP T TT T PP+T + P++
Sbjct: 351 TTTTTPPPTTTSTTTTTTTTPPPTTTARPNQ 381
>AL132863-1|CAB60573.1| 477|Caenorhabditis elegans Hypothetical
protein Y37H2A.1 protein.
Length = 477
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +2
Query: 578 GEENPLIKLLHKHMSTYTVPPARTGHTTPTPEWARPPSTPSD 703
G + P + H+H V R G PT +RPP P D
Sbjct: 64 GRQGPAV---HQHHQMVQVHTRRLGGAAPTMHHSRPPPPPLD 102
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,236,883
Number of Sequences: 27780
Number of extensions: 448907
Number of successful extensions: 1171
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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