Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6058
(798 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyce... 41 2e-04
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 32 0.11
SPBC577.11 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.58
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 29 1.0
SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr 1... 28 1.3
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 27 2.4
SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces po... 27 2.4
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 27 3.1
SPCC1020.07 |||haloacid dehalogenase-like hydrolase|Schizosaccha... 27 3.1
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 3.1
SPAP8A3.09c |paa1||protein phosphatase regulatory subunit Paa1|S... 27 4.1
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 26 5.4
SPCC1235.10c |sec6||exocyst complex subunit Sec6|Schizosaccharom... 26 5.4
SPCC553.06 |||oligosaccharyltransferase subunit|Schizosaccharomy... 26 7.2
SPAPB1E7.01c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 9.5
SPBC1271.03c |||phosphoprotein phosphatase|Schizosaccharomyces p... 25 9.5
>SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 520
Score = 41.1 bits (92), Expect = 2e-04
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
Frame = +1
Query: 4 NAGIKDIVQAIRWVKDNIHHFGGNAGNLTIFGESAGARAV--SLL--TASPLTKNLISKA 171
N G D + W +I FGGN N+ + G SAG+ + L+ T P +I +A
Sbjct: 164 NFGFWDQRLGLEWTYKHIESFGGNKENIAVGGISAGSYSALFQLIYETYHPEANQIIKRA 223
Query: 172 IIQS-GNALSSRAFQRDPLQSAKALARSLGCEAE-DVDEILEFLIATPAKDLVEADEKLN 345
++ S G ++ ++ + +Q LA+ G E E LE L A P +DL AD LN
Sbjct: 224 LLLSNGLSVQPKSVEESQIQ-FNELAQKFGIPLELSSAEKLEKLRAIPFQDL--ADNILN 280
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 31.9 bits (69), Expect = 0.11
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +1
Query: 73 NAGNLTIFGESAGAR--AVSLLTASPLTKNLISKAIIQSGNALSSRAFQRDPLQSAKA 240
N + I+G+ R +SL +P NL S +I S N L +FQ+DP A A
Sbjct: 351 NGTVVRIYGKDEAVRFTRLSLYQQAPKKSNLPSLDVIASNNPLVEESFQKDPTLFATA 408
>SPBC577.11 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 239
Score = 29.5 bits (63), Expect = 0.58
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Frame = +1
Query: 514 CERKSDDLQELIPADLNI--DRNSEEALAIVEEIKKLYFKGNHTGV---ESLPEY 663
C SDD+ + + +R ++AL IVE+I K GNH GV E P Y
Sbjct: 12 CPISSDDVLKATDPNFESWRERIVQDALKIVEQIPKWKHLGNHDGVALYEKAPAY 66
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 28.7 bits (61), Expect = 1.0
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Frame = -2
Query: 608 ISSTIAKASSEFLSMFRSAGINS*RSSDFLSQAYSNDVVPTSIG--MLAVLPDVSMLMKG 435
+SST+ SS S S +S SS S S+ +PTS + + +S +
Sbjct: 507 VSSTLLSGSSAIPSTSSSTPSSSIISSPMTSVLSSSSSIPTSSSSDFSSSITTISSGISS 566
Query: 434 SLI--TASTPGN--SFSITSPNKLLLVSRTFCKEFNFSSASTKSLAGVAIKNSRISS 276
S I T S+ + S S +SP+ L + FSSAST S + ++ S S+
Sbjct: 567 SSIPSTFSSVSSILSSSTSSPSSTSLSISSSSTSSTFSSASTSSPSSISSSISSSST 623
Score = 26.2 bits (55), Expect = 5.4
Identities = 18/73 (24%), Positives = 37/73 (50%)
Frame = -2
Query: 605 SSTIAKASSEFLSMFRSAGINS*RSSDFLSQAYSNDVVPTSIGMLAVLPDVSMLMKGSLI 426
SST + A+++ ++ +N +S S AY+ D V ++ + + P S ++ SL
Sbjct: 828 SSTTSLAANKGVNSNSITSLNLESTSSVTSTAYTTDSVTSTTALTSQGPS-SSVVSSSLS 886
Query: 425 TASTPGNSFSITS 387
+ ++ S +TS
Sbjct: 887 STTSLSTSIPVTS 899
>SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 19 DIVQAIRWVKDNIHHFGGN-AGNLTIFGESAGARAVSLLT 135
D + + +WV NI G N + G SAG VS+L+
Sbjct: 143 DAIDSFKWVASNIEKLGANPKRGFFLGGASAGGNFVSVLS 182
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 27.5 bits (58), Expect = 2.4
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +1
Query: 265 AEDVDEILEFLIATPAKDLVEADEKLNSLQKVLETSNNLFGLVIEKEFPGVEAVISEP 438
+E+V L+ L+ KD+ +E LN K+L + NL L+ EKE E+ + P
Sbjct: 248 SEEVVTTLKNLLEVKDKDVEGRNEALN---KILHPAKNLVELLTEKENLINESTLESP 302
>SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 594
Score = 27.5 bits (58), Expect = 2.4
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -2
Query: 524 FLSQAYSNDVVPTSIGMLAVLPDVSML-MKGSLITASTPGNSFSITSPNKLLLVSRTFC 351
F+S ++ + I +L+ +P +++L MK + + S N + + P KL L+ +C
Sbjct: 482 FISALQKGGMLQSIIRLLSTMPRLTLLLMKTNDLVRSLDENLKTKSGPEKLYLIMARYC 540
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 27.1 bits (57), Expect = 3.1
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -2
Query: 608 ISSTIAKAS-SEFLSMFRSAGINS*RSSDFLSQAYSNDVVPTSIGMLAVLPDVSMLMKGS 432
++S I+ S + +S S I+S +SS+F+ Q + S+G L S + G+
Sbjct: 614 VTSEISSTSLASLISTLTSQQISSNKSSEFVGQTTTEYTTSGSVGFTTTLATQSGSVPGT 673
Query: 431 -LITASTP 411
L+ TP
Sbjct: 674 VLVDVPTP 681
>SPCC1020.07 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 236
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 442 INILTSGRTANIPILVGTTSLEYACERKSDDLQEL 546
+N+L+ ++ NIPI + T+S + E+KS L L
Sbjct: 92 MNLLSKLKSLNIPIALATSSDTHNFEKKSAHLSHL 126
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -2
Query: 398 SITSPNKLLLVSRTFCKEFNFSSASTKSLAGVAIKNSRI 282
++ PNK V+ + K+F FSS S A++NS++
Sbjct: 52 TLIQPNKSQSVTSPYVKQFTFSSKEYNSHNKHALQNSQL 90
>SPAP8A3.09c |paa1||protein phosphatase regulatory subunit
Paa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 590
Score = 26.6 bits (56), Expect = 4.1
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 487 VGTTSLEYACERKSDDLQELIP-ADLNIDRNSEEALAIVEEIKKLYFKGNHTGVESLPEY 663
+ T +L ER D ELIP D +ID E A+ +++ GN PEY
Sbjct: 35 LSTIALALGPERTRD---ELIPFLDESIDDEDEVLSALADQL------GNFVDYVGGPEY 85
Query: 664 FHLLSDKLINL 696
H+L L NL
Sbjct: 86 AHVLLSPLENL 96
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 26.2 bits (55), Expect = 5.4
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Frame = +1
Query: 223 LQSAKALARSLGCEAED----VDEILEFLIATPAKDLVEADEKLNSLQKVLETSNNLFGL 390
+ AK LAR G + +DE ++ LI+ + + ++NS+Q TSN
Sbjct: 80 IHGAKVLARISGANPQKLKAAIDEYIQPLISQISSTNASVETQVNSVQTTNTTSNT---- 135
Query: 391 VIEKEFPGVEAVISEPFINILTSGRTANIPILVGTTSLEYAC 516
K G+++ ++E ++ LT+ N+ + + T E AC
Sbjct: 136 --SKAPNGLDSELNER-LSTLTNAH--NVMLFLKGTPSEPAC 172
>SPCC1235.10c |sec6||exocyst complex subunit
Sec6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 730
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 577 SEEALAIVEEIKKLYFKGNHTGVESLPEYFHLLSD 681
+E + E I+KL VE++ EYFHLL +
Sbjct: 634 AEHLRSTFEPIEKLLLGMLDADVETVSEYFHLLKE 668
>SPCC553.06 |||oligosaccharyltransferase subunit|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 271
Score = 25.8 bits (54), Expect = 7.2
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = -2
Query: 536 RSSDFLSQAYSNDVVPTSIGMLAV----LPDVSMLMKGSLITASTPGNSFSITSPNKLLL 369
R++ FLS +S VV + IG+L V LP ++ S A T G + S+ LL
Sbjct: 184 RANYFLSICFSVSVVVSLIGLLGVWQKLLPKSNVYSVSSSSFARTFGFA-SLAVAEILLF 242
Query: 368 VSRTFCKEFNFS--SASTKSLAGVAIKN 291
+ T F F +A + G+A K+
Sbjct: 243 IYWTSLSIFQFGAYAAGVAIMCGIAAKS 270
>SPAPB1E7.01c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 163
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +1
Query: 133 TASPLTKNLISKAIIQSGNALSSRAFQRDPLQSAKALARSLGCEAEDVDE 282
T+ +TKNLI+ + ++SS DP A+ LG +D E
Sbjct: 16 TSISITKNLINSWLGNENTSVSSDEKNDDPPLQARPPRLGLGASRKDQSE 65
>SPBC1271.03c |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 25.4 bits (53), Expect = 9.5
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +1
Query: 631 NHTGVESLPEYFHLLSDKLINLD-THRYIKYLLPVTNRPIYYYRFDYVGELISPKDL 798
NH V H K I L RY+K+L V N Y Y+F + ++++ K L
Sbjct: 165 NHIAVSDFVAKSHSNIPKDIELACVIRYLKHLKSVPNVSYYIYKFPF--KILADKSL 219
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.136 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,270,435
Number of Sequences: 5004
Number of extensions: 66607
Number of successful extensions: 266
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 265
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 389395636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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