Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6058
(798 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 103 2e-24
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 103 2e-24
AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein. 80 2e-17
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 71 1e-14
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 71 1e-14
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 27 0.27
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 7.6
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 7.6
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 7.6
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 7.6
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 103 bits (247), Expect = 2e-24
Identities = 77/274 (28%), Positives = 123/274 (44%), Gaps = 16/274 (5%)
Frame = +1
Query: 1 GNAGIKDIVQAIRWVKDNIHHFGGNAGNLTIFGESAGARAVSLLTASPLTKNLISKAIIQ 180
GN G+KD A+RWV +NI FGGN +T+ G SAG +V SPL+ L I
Sbjct: 175 GNMGLKDQSMALRWVSENIEWFGGNPKRITLIGLSAGGASVHYHYLSPLSAGLFQGGISI 234
Query: 181 SGNALSSRAFQRDPLQSAKALARSLGCEAEDVDEILEFLIATPAKDLVEADEKLNSLQKV 360
SG AL+ + L+ AK + +GC +V E++ L PA+ +VE L + +
Sbjct: 235 SGTALNCWTQTENSLEKAKQVGAFMGCPTRNVKEMIRCLRYRPARAIVET---LANFMRF 291
Query: 361 LETSNNLFGLVIEKEFPGVEAV--ISEPFINILTSGRTANIPILVGTTS-------LEYA 513
FG V EK ++ I I I+ SG ++P + G TS E+
Sbjct: 292 YYNPFTPFGPVTEKVNNDSNSLPFIDRTPIEIINSGDVQDVPWVTGVTSEEGLYPVAEFI 351
Query: 514 CERKS----DDLQELIPA---DLNIDRNSEEALAIVEEIKKLYFKGNHTGVESLPEYFHL 672
+ ++ D+ +LI D N E+ + + I+ YF+ N +L +
Sbjct: 352 AKPEALKLLDENWDLIAPYFLDYNYTIPKEKHVEVARLIRNYYFESNKIDETTLKHLIDV 411
Query: 673 LSDKLINLDTHRYIKYLLPVTNRPIYYYRFDYVG 774
SD+ D + + V +P+++Y + Y G
Sbjct: 412 ASDRFFITDGEKAARMQAKVNRQPVWFYYYTYKG 445
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 103 bits (247), Expect = 2e-24
Identities = 77/274 (28%), Positives = 123/274 (44%), Gaps = 16/274 (5%)
Frame = +1
Query: 1 GNAGIKDIVQAIRWVKDNIHHFGGNAGNLTIFGESAGARAVSLLTASPLTKNLISKAIIQ 180
GN G+KD A+RWV +NI FGGN +T+ G SAG +V SPL+ L I
Sbjct: 175 GNMGLKDQSMALRWVSENIEWFGGNPKRITLIGLSAGGASVHYHYLSPLSAGLFQGGISI 234
Query: 181 SGNALSSRAFQRDPLQSAKALARSLGCEAEDVDEILEFLIATPAKDLVEADEKLNSLQKV 360
SG AL+ + L+ AK + +GC +V E++ L PA+ +VE L + +
Sbjct: 235 SGTALNCWTQTENSLEKAKQVGAFMGCPTRNVKEMIRCLRYRPARAIVET---LANFMRF 291
Query: 361 LETSNNLFGLVIEKEFPGVEAV--ISEPFINILTSGRTANIPILVGTTS-------LEYA 513
FG V EK ++ I I I+ SG ++P + G TS E+
Sbjct: 292 YYNPFTPFGPVTEKVNNDSNSLPFIDRTPIEIINSGDVQDVPWVTGVTSEEGLYPVAEFI 351
Query: 514 CERKS----DDLQELIPA---DLNIDRNSEEALAIVEEIKKLYFKGNHTGVESLPEYFHL 672
+ ++ D+ +LI D N E+ + + I+ YF+ N +L +
Sbjct: 352 AKPEALKLLDENWDLIAPYFLDYNYTIPKEKHVEVARLIRNYYFESNKIDETTLKHLIDV 411
Query: 673 LSDKLINLDTHRYIKYLLPVTNRPIYYYRFDYVG 774
SD+ D + + V +P+++Y + Y G
Sbjct: 412 ASDRFFITDGEKAARMQAKVNRQPVWFYYYTYKG 445
>AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein.
Length = 169
Score = 80.2 bits (189), Expect = 2e-17
Identities = 42/109 (38%), Positives = 59/109 (54%)
Frame = +1
Query: 1 GNAGIKDIVQAIRWVKDNIHHFGGNAGNLTIFGESAGARAVSLLTASPLTKNLISKAIIQ 180
GN G+KD A+RWV +NI FGGN +T+ G SAG +V SPL+ L I
Sbjct: 46 GNMGLKDQSMALRWVSENIEWFGGNPKRITLIGLSAGGASVHYHYLSPLSAGLFQGGISI 105
Query: 181 SGNALSSRAFQRDPLQSAKALARSLGCEAEDVDEILEFLIATPAKDLVE 327
SG AL+ + L+ AK + +GC +V E++ L PA+ +VE
Sbjct: 106 SGTALNCWTQTENSLEKAKQVGAFMGCPTRNVKEMIRCLRYRPARAIVE 154
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 70.9 bits (166), Expect = 1e-14
Identities = 39/96 (40%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Frame = +1
Query: 1 GNAGIKDIVQAIRWVKDNIHHFGGNAGNLTIFGESAGARAVSLLTASPLTKNLISKAIIQ 180
GN G+ D A+RW++DN FGG+ +TIFGESAG +VSL SP+T+ L+ + I+Q
Sbjct: 219 GNMGLWDQALALRWLRDNAEAFGGDPELITIFGESAGGSSVSLHLISPVTRGLVRRGILQ 278
Query: 181 SG--NALSSRAFQRDPLQSAKALARSLGCEAEDVDE 282
SG NA S + A L GC + ++E
Sbjct: 279 SGTLNAPWSYMSGEKANEVATILVDDCGCNSTMLNE 314
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 70.9 bits (166), Expect = 1e-14
Identities = 39/96 (40%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Frame = +1
Query: 1 GNAGIKDIVQAIRWVKDNIHHFGGNAGNLTIFGESAGARAVSLLTASPLTKNLISKAIIQ 180
GN G+ D A+RW++DN FGG+ +TIFGESAG +VSL SP+T+ L+ + I+Q
Sbjct: 219 GNMGLWDQALALRWLRDNAEAFGGDPELITIFGESAGGSSVSLHLISPVTRGLVRRGILQ 278
Query: 181 SG--NALSSRAFQRDPLQSAKALARSLGCEAEDVDE 282
SG NA S + A L GC + ++E
Sbjct: 279 SGTLNAPWSYMSGEKANEVATILVDDCGCNSTMLNE 314
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 26.6 bits (56), Expect = 0.27
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +1
Query: 493 TTSLEYACERKSDDLQELIPADLNIDRNSEEALAIVEEIKKLYFKGNHTGVES 651
T L Y + L E++ AD+N +N + L + +++ +LY G E+
Sbjct: 1006 TPELIYEYQIHPKTLNEVLQADMNALKNFNQPLLVNDQLGQLYLDLEVEGFET 1058
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.8 bits (44), Expect = 7.6
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +2
Query: 47 KIISITSVVMPVI*QYLV 100
KI+ TS+V+P+I +YL+
Sbjct: 284 KILPPTSLVLPLIAKYLL 301
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 7.6
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 295 LIATPAKDLVEADEKLNSLQKVLETSNN 378
L AKDLV ++ N ET NN
Sbjct: 681 LFKDEAKDLVSVNKSWNKWNDWQETQNN 708
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 7.6
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 295 LIATPAKDLVEADEKLNSLQKVLETSNN 378
L AKDLV ++ N ET NN
Sbjct: 681 LFKDEAKDLVSVNKSWNKWNDWQETQNN 708
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 7.6
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 295 LIATPAKDLVEADEKLNSLQKVLETSNN 378
L AKDLV ++ N ET NN
Sbjct: 681 LFKDEAKDLVSVNKSWNKWNDWQETQNN 708
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.317 0.136 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,058
Number of Sequences: 438
Number of extensions: 4569
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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