Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6056
(711 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 31 0.21
SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces p... 30 0.28
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 29 0.66
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 29 0.87
SPBC1289.13c |||alpha-1,2-galactosyltransferase|Schizosaccharomy... 29 0.87
SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces p... 29 0.87
SPAC2C4.06c |||rRNA methyltransferase |Schizosaccharomyces pombe... 28 1.1
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 28 1.5
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 28 1.5
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.0
SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase ... 27 2.0
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.6
SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regula... 27 2.6
SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomy... 27 2.6
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 2.6
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb... 27 3.5
SPAC8C9.07 |||rRNA processing protein Fyv7 |Schizosaccharomyces ... 27 3.5
SPAC1B9.03c ||SPAC6B12.01|RNA-binding protein|Schizosaccharomyce... 27 3.5
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 26 4.6
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 4.6
SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 26 4.6
SPBC1198.06c |||mannan endo-1,6-alpha-mannosidase |Schizosacchar... 26 6.1
SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces po... 26 6.1
SPAC27F1.04c |nuf2||spindle pole body protein Nuf2|Schizosacchar... 26 6.1
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 26 6.1
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 26 6.1
SPBC29A3.21 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 6.1
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 26 6.1
SPAC343.12 |rds1||conserved fungal protein|Schizosaccharomyces p... 25 8.1
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 25 8.1
SPAC4F8.04 |||Brix domain protein Rpf1|Schizosaccharomyces pombe... 25 8.1
SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces pom... 25 8.1
SPAC806.08c |mod21||gamma tubulin complex subunit Mod21|Schizosa... 25 8.1
SPBC3E7.13c |||splicing factor, SYF2 family|Schizosaccharomyces ... 25 8.1
SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subun... 25 8.1
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 25 8.1
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 30.7 bits (66), Expect = 0.21
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +1
Query: 22 RKALKKKRQDLDNRRKKYKREDEARQKRRRKSEKYLDKRIRKLKD 156
R+ L+KKR ++ R++ K E+E R+K + EK +RIR +++
Sbjct: 115 RELLEKKR--IEAERQRLKDEEERRKKELMEKEKKEKERIRLIEE 157
Score = 27.1 bits (57), Expect = 2.6
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Frame = +1
Query: 19 ERKALKKKRQ---DLDNRRKKYKREDEARQKRRRK---SEKYLDKRIRKLK 153
E+K ++ +RQ D + RRKK E E ++K R + +K+ + R+LK
Sbjct: 119 EKKRIEAERQRLKDEEERRKKELMEKEKKEKERIRLIEEQKHKENEQRRLK 169
>SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 30.3 bits (65), Expect = 0.28
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 13 SGERKALKKKRQDLDNRRKKYKREDEARQKRRRKSEKYLDKRIRK 147
S ++K K+K+ L + K+ K +D QKR+RK K+ K
Sbjct: 144 SKKKKEKKEKKDKLKKKSKRLKLDDSHTQKRKRKVRDKESKKSSK 188
Score = 25.8 bits (54), Expect = 6.1
Identities = 15/54 (27%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = +1
Query: 7 RTSGERKALKKKRQDLDNRRKKYKREDEARQKRRRK----SEKYLDKRIRKLKD 156
+TSG+ + ++K +++KK K+E + + K++ K + + KR RK++D
Sbjct: 132 KTSGKESSKREK-----SKKKKEKKEKKDKLKKKSKRLKLDDSHTQKRKRKVRD 180
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 29.1 bits (62), Expect = 0.66
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 55 DNRRKKYKREDEARQKRRRKSEKYLDKRIRKLKD 156
DN KK KRE E +++R+K + L + +K+K+
Sbjct: 89 DNEAKKMKREKEILRQQRQKRKSELTQLSQKVKE 122
Score = 25.8 bits (54), Expect = 6.1
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +1
Query: 19 ERKALKKKRQDLDNRRKKYKREDEARQKRRRKSEKYLDKRIRK 147
+ +A K KR+ R+++ KR+ E Q ++ EK+ K++RK
Sbjct: 89 DNEAKKMKREKEILRQQRQKRKSELTQLSQKVKEKF--KKMRK 129
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 28.7 bits (61), Expect = 0.87
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 4 SRTSGERKALKKKRQDLDNRRKKYKREDEARQKRRRKSEK 123
+R E + LK++++ ++ KRE++ +QK R K K
Sbjct: 637 ARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKLK 676
Score = 27.9 bits (59), Expect = 1.5
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 7/51 (13%)
Frame = +1
Query: 22 RKALKKKRQDLDNRRK---KYKREDEARQ---KRRRKSEKYLDK-RIRKLK 153
+KAL+ KRQ+ +++ + KRE E +Q +R+++ EK K R +KLK
Sbjct: 626 QKALEAKRQEEARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKLK 676
Score = 27.9 bits (59), Expect = 1.5
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 19 ERKALKKKRQDLDNRRKKYKREDEARQKRRRK-SEKYLDKRIRK 147
+ +A KK+ + R ++ K+++ RQKR K +K +K+++K
Sbjct: 634 QEEARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKLKK 677
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/54 (22%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 RSRTSGERKALKKKRQDLDNRRKKYKREDEARQKRRRKS--EKYLDKRIRKLKD 156
R + + E++ +++ + + RK+ ++ D+ ++RRR+ EK +++ R+L++
Sbjct: 684 REKMAREQRLREEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLRE 737
>SPBC1289.13c |||alpha-1,2-galactosyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 375
Score = 28.7 bits (61), Expect = 0.87
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 594 YMSLVLSAFHDYAERHSTDYGFTSLLGWQPSCG 692
Y+ ++ DYAERH + F L ++PS G
Sbjct: 123 YIRTIIKNRRDYAERHGFKFEFLDLDEYKPSIG 155
>SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1098
Score = 28.7 bits (61), Expect = 0.87
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 541 CNLYMNSLRKKPYLSVYYTCPWFYPHFMTMLNAIRQITDLLLFLVGSL 684
C+L++ L VY C H + M+NA+ Q T L+ G L
Sbjct: 554 CHLFLEKLPTITKTYVYSNCKEIPDHILEMINALYQQTRALVACTGYL 601
>SPAC2C4.06c |||rRNA methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 455
Score = 28.3 bits (60), Expect = 1.1
Identities = 9/26 (34%), Positives = 19/26 (73%)
Frame = +1
Query: 67 KKYKREDEARQKRRRKSEKYLDKRIR 144
K YK +D+ ++++R+K +K + K+ R
Sbjct: 425 KMYKNDDDTKKRKRKKKKKEVKKKAR 450
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 27.9 bits (59), Expect = 1.5
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 19 ERKALKKKRQDLDNRRKKYKREDEARQKR-RRKSEKYLDKRIRKL 150
ER+ +++ D D+ + YKR ++ KR +R+ E +K IR L
Sbjct: 972 ERREEEERENDEDHPSRTYKRTTKSITKRQQRREEMVREKEIRLL 1016
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 27.9 bits (59), Expect = 1.5
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +1
Query: 4 SRTSGERKALKKKRQDLDNRRKKYKREDEARQKRRRKSEKYLDKRIRKLKDT 159
S G+ K+ + RKK +ED+A +KR+ K KY K RKLK +
Sbjct: 469 SAKQGKGNGRAKETPEEKRARKKKTKEDKA-EKRKSKIPKYEKK--RKLKQS 517
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 27.5 bits (58), Expect = 2.0
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +1
Query: 7 RTSGERKALKKKRQDLDNRRKKYKREDEARQKRRRK 114
+ +G+ LKK+ +DL+NR K + +++ +R K
Sbjct: 225 KMNGKEDDLKKREKDLENRLLKVEEHEKSLNERATK 260
>SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 27.5 bits (58), Expect = 2.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 624 DYAERHSTDYGFTSLLGWQPSC 689
+Y HS +G+T LLG P C
Sbjct: 153 NYGSHHSAIFGYTKLLGDVPGC 174
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 27.1 bits (57), Expect = 2.6
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 55 DNRRKKYKREDEARQKRRRKSEKYLDKR 138
+ R K+Y R++ + KRR K +K + +R
Sbjct: 284 ERRNKRYTRKEMEQMKRRTKEKKEMKRR 311
>SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regulator
Prp45|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 1 RSRTSGERKALKKKRQDLDNRRKKYKREDEARQKRRRKSEKYL 129
RSR+ + + ++ D + ++R E R++RRR++EK L
Sbjct: 364 RSRSRAGSFSHHSESENEDEDSEAFRRRQELRRERRRQAEKDL 406
>SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 607
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 205 LGFSVAQDVGRSTCRAITDPCYTYDSVKSTLKHP 306
L F+ D C ITDP + S+K ++HP
Sbjct: 473 LEFNWRDDAWDFVCHCITDPKDRFCSLKQVMQHP 506
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +2
Query: 8 ELQEKERL*RKKDKILTIVEKNTKERMKPDKRDDENLKNILINEYASLKTHLIF 169
EL+EK L KKD+ L + + KE+ K + +L+++ + K H ++
Sbjct: 477 ELKEKSALIDKKDQELNNLREQIKEQKKVSESTQSSLQSLQRDILNEKKKHEVY 530
>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 209
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/32 (37%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +1
Query: 28 ALKKKRQ-DLDNRRKKYKREDEARQKRRRKSE 120
A ++ RQ DL N++++ R+DE ++R+R+ E
Sbjct: 139 ARRRARQLDLANQQREQARQDEIARERKRRVE 170
>SPAC8C9.07 |||rRNA processing protein Fyv7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 144
Score = 26.6 bits (56), Expect = 3.5
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +1
Query: 13 SGERKALKKKRQDLDNRRKKYKREDEARQKRRRKSEKYLDKRI---RKLKD 156
SGERK K+ L ++ Y+R +E R+ ++ K + + KR+ +K KD
Sbjct: 63 SGERKRKFSKKSHL---QELYERSEEKRRIQQEKEDAKVQKRLEIEKKQKD 110
>SPAC1B9.03c ||SPAC6B12.01|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 389
Score = 26.6 bits (56), Expect = 3.5
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 19 ERKALKKKRQDLDNRRKKYKREDEARQKRRRK 114
+ +ALK+KR+ + + KRE++ R+K ++K
Sbjct: 334 QSRALKEKRKKEQDENVRRKRENKKRRKDQKK 365
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 26.2 bits (55), Expect = 4.6
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +1
Query: 1 RSRTSGERKALKKKRQDLDNRRKKYKREDEARQKRRRK 114
R R + +AL+++ +L +R+ RE++ + KRR++
Sbjct: 116 RDRLQEKLRALQEESANLRRQRENRLREEQEQSKRRKQ 153
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 26.2 bits (55), Expect = 4.6
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +2
Query: 17 EKERL*RKKDKILTIVEKNTKERMKPDKRDDENLKNILINEYASLK 154
E +RL ++ DK+ ++ + K+R ++ E+ KN L+N Y SLK
Sbjct: 77 EIDRLKKEGDKVSILLMQERKKR-----KELESAKNNLLNVYDSLK 117
>SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 233
Score = 26.2 bits (55), Expect = 4.6
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = +1
Query: 25 KALKKKRQDLDNRRKKYKREDEARQKRRRKSEKYLDKRIRKLKD 156
K KKK + L+ R KK+ ++ ++ ++ +K ++ ++ +K D
Sbjct: 4 KLSKKKLKSLEYRSKKFDKKSQSLEEHEKKVQQKNEELEKKAAD 47
>SPBC1198.06c |||mannan endo-1,6-alpha-mannosidase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 466
Score = 25.8 bits (54), Expect = 6.1
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 639 HSTDYGFTSLLGWQPSC 689
H+T Y FT + W P C
Sbjct: 274 HATSYFFTDDIAWDPQC 290
>SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 25.8 bits (54), Expect = 6.1
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +1
Query: 25 KALKKKRQDLDNRRKKYKREDEARQKRRRKSE 120
K +K+R+ + KK K+E + ++++++KSE
Sbjct: 443 KKEEKRRKKEAKKEKKEKKEKKEKKEKKKKSE 474
>SPAC27F1.04c |nuf2||spindle pole body protein
Nuf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 25.8 bits (54), Expect = 6.1
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +1
Query: 31 LKKKRQDLDNRRKKYKREDEARQKRRRKSEK 123
L+ +Q +DN R++YK + R K+ +++EK
Sbjct: 358 LEAAKQRMDNIREEYKVITQERNKKIQETEK 388
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 25.8 bits (54), Expect = 6.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 86 MKPDKRDDENLKNILINEYASLK 154
+ P KR D LK+++INE + K
Sbjct: 847 LDPSKRKDSKLKHVIINEKRNKK 869
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 25.8 bits (54), Expect = 6.1
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
Frame = +1
Query: 7 RTSGERKALKKKRQDLDNRRKKYKRED----EARQKRRRK 114
R + R+A + R+D D+R+++ + D AR+++RRK
Sbjct: 1587 RENSRRRARQDDRRDRDSRQQRDRPRDRTSRSAREEKRRK 1626
>SPBC29A3.21 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 100
Score = 25.8 bits (54), Expect = 6.1
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Frame = -1
Query: 468 FRHSHDVTSNFVII*FVASRLHSFHRLKPPKYT-------F*CSYSATVEY 337
FR+ H+V S+ V+ F LH +L Y F SYSA+++Y
Sbjct: 6 FRYLHNVLSHTVVFCFTEVSLHIVKQLGVESYACTVHASRFQKSYSASIDY 56
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 25.8 bits (54), Expect = 6.1
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +1
Query: 7 RTSGERKALKKKRQDLDNRRKKYKREDEARQKRR--RKSEKYLDKRIRKLKD 156
R++ E ++K+K + + KK+K++ + K R +K +K K K K+
Sbjct: 60 RSADEEASVKRKEKKSKHEHKKHKKDKPSADKDRISKKDKKKSKKGKSKTKE 111
>SPAC343.12 |rds1||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 402
Score = 25.4 bits (53), Expect = 8.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 594 YMSLVLSAFHDYAERHSTDYGFT 662
Y SL L+ +H+Y E +YG T
Sbjct: 79 YQSLSLALYHEYIEYDLFNYGLT 101
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 25.4 bits (53), Expect = 8.1
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 1 RSRTSGERKALKKKRQDLDNRRKKYKREDEARQKRRRKSE-KYLDKRIRK 147
R + E K LKK ++ +KK ++ +A +KR +K KY + R+
Sbjct: 715 RKEQAKEAKRLKKLAKEEKRLKKKEEKARKAEEKRLQKERAKYAKQMSRE 764
>SPAC4F8.04 |||Brix domain protein Rpf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 306
Score = 25.4 bits (53), Expect = 8.1
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +1
Query: 25 KALKKKRQDLDNRRKKYKREDE--ARQKRRRKSE 120
KAL +K +D RRK+ +E+E +KR R SE
Sbjct: 16 KALHQKNKDKLERRKERAKEEEKDPEKKRLRLSE 49
>SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 25.4 bits (53), Expect = 8.1
Identities = 8/25 (32%), Positives = 19/25 (76%)
Frame = +1
Query: 49 DLDNRRKKYKREDEARQKRRRKSEK 123
++D ++KK K+ ++ ++K +RK+ K
Sbjct: 433 EIDKKKKKKKKNNKKKKKNKRKNIK 457
>SPAC806.08c |mod21||gamma tubulin complex subunit
Mod21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 618
Score = 25.4 bits (53), Expect = 8.1
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 559 SLRKKPYLSVYYTCPWFYPHFMTMLNAIRQ 648
S + +P+LSV + P PH ++ L Q
Sbjct: 247 STKNEPFLSVVFIYPQIKPHLLSCLKNTHQ 276
>SPBC3E7.13c |||splicing factor, SYF2 family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 229
Score = 25.4 bits (53), Expect = 8.1
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 8/53 (15%)
Frame = +1
Query: 25 KALKKKRQDLDNRRKKYKREDEARQKRRRK--------SEKYLDKRIRKLKDT 159
+ L++KR + + K + E+E RR+ SEK+ D+R+RK K T
Sbjct: 48 RRLERKRMEAEEELAKIETEEEGGDFERRRAWDWTIEESEKW-DQRLRKKKQT 99
>SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subunit
Taf7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 25.4 bits (53), Expect = 8.1
Identities = 8/35 (22%), Positives = 22/35 (62%)
Frame = +1
Query: 7 RTSGERKALKKKRQDLDNRRKKYKREDEARQKRRR 111
R +GE A +++ ++ + ++ + +DE R+ +R+
Sbjct: 302 RAAGEESASEEEEEEEEEEEEENEADDETRENKRQ 336
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 25.4 bits (53), Expect = 8.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 711 VHNIQGLHTKAANQEEK*IRNLSNGVQHS 625
V ++ LHTK ANQ + I+ +S ++ S
Sbjct: 1124 VQELKSLHTKEANQLSERIKEISEMLEQS 1152
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,840,544
Number of Sequences: 5004
Number of extensions: 58908
Number of successful extensions: 284
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 281
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 331187010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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