Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6055
         (771 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   4.2  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   5.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   5.5  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   5.5  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    22   7.3  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    22   7.3  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    22   7.3  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    22   7.3  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    22   7.3  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    22   7.3  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   9.6  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   9.6  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   9.6  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
 Frame = +2

Query: 362 SETSFSFGQQPH---ARV--GVTRSGAFSIQSQAVGFSRSNKRLVFLAVIATHLDYCIF 523
           S  +  FG+ P    AR+   + +S     Q +AV     +++ +   V+  HLD C F
Sbjct: 134 SRDAVRFGRVPKREKARILAAMQQSSHSRSQEKAVAAELEDEQRLLATVVQAHLDTCDF 192


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 116 CARRPRKEALVVHY 157
           C  RP   AL++HY
Sbjct: 122 CTERPEDGALILHY 135


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 734 TYVNLIDVHHKEVRYPIAVFDNTGRA 657
           T +N+I     EV Y + V D +GR+
Sbjct: 866 TSINMIVQEVPEVPYGLKVLDKSGRS 891


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 116 CARRPRKEALVVHY 157
           C  RP   AL++HY
Sbjct: 122 CTERPEDGALILHY 135


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 510 IIVSSSNNWQLANPSRHRLQSLC 578
           II S SNN+  +N + +  + LC
Sbjct: 81  IISSLSNNYNYSNYNNNNYKQLC 103


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 510 IIVSSSNNWQLANPSRHRLQSLC 578
           II S SNN+  +N + +  + LC
Sbjct: 81  IISSLSNNYNYSNYNNNNYKQLC 103


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 510 IIVSSSNNWQLANPSRHRLQSLC 578
           II S SNN+  +N + +  + LC
Sbjct: 81  IISSLSNNYNYSNYNNNNYKQLC 103


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 510 IIVSSSNNWQLANPSRHRLQSLC 578
           II S SNN+  +N + +  + LC
Sbjct: 81  IISSLSNNYNYSNYNNNNYKQLC 103


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 510 IIVSSSNNWQLANPSRHRLQSLC 578
           II S SNN+  +N + +  + LC
Sbjct: 81  IISSLSNNYNYSNYNNNNYKQLC 103


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 510 IIVSSSNNWQLANPSRHRLQSLC 578
           II S SNN+  +N + +  + LC
Sbjct: 81  IISSLSNNYNYSNYNNNNYKQLC 103


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/34 (23%), Positives = 14/34 (41%)
 Frame = -3

Query: 289 GCAPHGRIDNINSASIRCVCDDGYVSDYNTDTET 188
           G + HG  +  +   + C CDD +        +T
Sbjct: 72  GESKHGLTNTASHTRLSCDCDDKFYDCLKNSADT 105


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/34 (23%), Positives = 14/34 (41%)
 Frame = -3

Query: 289 GCAPHGRIDNINSASIRCVCDDGYVSDYNTDTET 188
           G + HG  +  +   + C CDD +        +T
Sbjct: 77  GESKHGLTNTASHTRLSCDCDDKFYDCLKNSADT 110


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/34 (23%), Positives = 14/34 (41%)
 Frame = -3

Query: 289 GCAPHGRIDNINSASIRCVCDDGYVSDYNTDTET 188
           G + HG  +  +   + C CDD +        +T
Sbjct: 77  GESKHGLTNTASHTRLSCDCDDKFYDCLKNSADT 110


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,169
Number of Sequences: 438
Number of extensions: 4618
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)