Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6052
         (676 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.           27   0.72 
EF519369-1|ABP68478.1|  506|Anopheles gambiae LRIM1 protein.           27   0.72 
CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    23   8.8  

>EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.
          Length = 452

 Score = 26.6 bits (56), Expect = 0.72
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -1

Query: 658 SKLEPIRTYLKTASERFFEKAARHDNPLR*W 566
           S L+P+R  +K   E + E+ +  +N +R W
Sbjct: 414 SPLQPLRAIVKRYEEMYVEQQSAQNNAIRDW 444


>EF519369-1|ABP68478.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 26.6 bits (56), Expect = 0.72
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -1

Query: 658 SKLEPIRTYLKTASERFFEKAARHDNPLR*W 566
           S L+P+R  +K   E + E+ +  +N +R W
Sbjct: 429 SPLQPLRAIVKRYEEMYVEQQSAQNNAIRDW 459


>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 435 GRNRDPLRRSGENSDQ*LESLKAPR 509
           GR+   LR +G  S +  E+L+APR
Sbjct: 93  GRSMTDLRLAGYGSSEEDENLRAPR 117


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,073
Number of Sequences: 2352
Number of extensions: 11881
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)