Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6049
         (507 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    23   1.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   1.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   5.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   5.6  
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              21   7.3  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   9.7  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -1

Query: 396 LWETILLQSLQNSVKREPADIQDV 325
           +W+ + ++ L NS KR+  D+ +V
Sbjct: 58  IWDQMTVKELANSAKRDINDVLNV 81


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 434 DQRNLIKFDLKNKK 475
           +QRN+ K DLKN K
Sbjct: 671 NQRNMYKLDLKNMK 684


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +2

Query: 134 GIRNGVVWTWKA*RRVY 184
           G+  G  W+W+  R+ Y
Sbjct: 166 GVFGGSAWSWREERQAY 182


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +2

Query: 134 GIRNGVVWTWKA*RRVY 184
           G+  G  W+W+  R+ Y
Sbjct: 166 GVFGGSAWSWREERQAY 182


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -2

Query: 197 LNCFHRRAVMPSMSKRLHSESLDSPY 120
           ++C +  AV P M+  L+ ESL  PY
Sbjct: 121 MDCRNIGAV-PKMATELYEESLFVPY 145


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 143 NGVVWTWKA*RRVYESSLNV 202
           NG+V TW A  R   +SL +
Sbjct: 797 NGIVKTWIAHDRYLPNSLRI 816


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,499
Number of Sequences: 438
Number of extensions: 2548
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)