Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6048
         (745 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK125953-1|BAC86359.1|  416|Homo sapiens protein ( Homo sapiens ...    35   0.27 
AB126829-1|BAD93192.1|  437|Homo sapiens hypothetical protein pr...    35   0.27 
AB126828-1|BAD93191.1|  530|Homo sapiens hypothetical protein pr...    35   0.27 
BC015168-1|AAH15168.2|  293|Homo sapiens ELMO/CED-12 domain cont...    31   4.4  

>AK125953-1|BAC86359.1|  416|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43965 fis, clone TESTI4017001. ).
          Length = 416

 Score = 35.1 bits (77), Expect = 0.27
 Identities = 29/96 (30%), Positives = 50/96 (52%)
 Frame = +3

Query: 414 GGVGTGNFSIPFSSLSRRLKCCAQTQLGNSILNILTYVNKTQNFTINVNAICCRF*TGST 593
           GG G+ + S+  S+ SR +   A  Q  + +L++L    K  +   + + I C    GS+
Sbjct: 71  GGTGSDSASLELSAESRMI-LDAFAQQCSRVLSLLNCGGKLLDSNHSQSMISCVKQEGSS 129

Query: 594 YFIRQWHCNPVGSWLNSLARHSDPDSIKMDTMRARQ 701
           Y  RQ HC+ +G  ++S  + SD   I+M  M+ +Q
Sbjct: 130 YNERQEHCH-IGKGVHS--QTSDNVDIEMQYMQRKQ 162


>AB126829-1|BAD93192.1|  437|Homo sapiens hypothetical protein
           protein.
          Length = 437

 Score = 35.1 bits (77), Expect = 0.27
 Identities = 29/96 (30%), Positives = 50/96 (52%)
 Frame = +3

Query: 414 GGVGTGNFSIPFSSLSRRLKCCAQTQLGNSILNILTYVNKTQNFTINVNAICCRF*TGST 593
           GG G+ + S+  S+ SR +   A  Q  + +L++L    K  +   + + I C    GS+
Sbjct: 145 GGTGSDSASLELSAESRMI-LDAFAQQCSRVLSLLNCGGKLLDSNHSQSMISCVKQEGSS 203

Query: 594 YFIRQWHCNPVGSWLNSLARHSDPDSIKMDTMRARQ 701
           Y  RQ HC+ +G  ++S  + SD   I+M  M+ +Q
Sbjct: 204 YNERQEHCH-IGKGVHS--QTSDNVDIEMQYMQRKQ 236


>AB126828-1|BAD93191.1|  530|Homo sapiens hypothetical protein
           protein.
          Length = 530

 Score = 35.1 bits (77), Expect = 0.27
 Identities = 29/96 (30%), Positives = 50/96 (52%)
 Frame = +3

Query: 414 GGVGTGNFSIPFSSLSRRLKCCAQTQLGNSILNILTYVNKTQNFTINVNAICCRF*TGST 593
           GG G+ + S+  S+ SR +   A  Q  + +L++L    K  +   + + I C    GS+
Sbjct: 145 GGTGSDSASLELSAESRMI-LDAFAQQCSRVLSLLNCGGKLLDSNHSQSMISCVKQEGSS 203

Query: 594 YFIRQWHCNPVGSWLNSLARHSDPDSIKMDTMRARQ 701
           Y  RQ HC+ +G  ++S  + SD   I+M  M+ +Q
Sbjct: 204 YNERQEHCH-IGKGVHS--QTSDNVDIEMQYMQRKQ 236


>BC015168-1|AAH15168.2|  293|Homo sapiens ELMO/CED-12 domain
           containing 2 protein.
          Length = 293

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +1

Query: 19  HPLVSFAQHPRGSHEYCLLYINLTYIGYSL 108
           H ++S + HP+  + Y ++ INLT + YSL
Sbjct: 189 HQILSRSNHPKLGYSYAIVGINLTEMAYSL 218


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,901,835
Number of Sequences: 237096
Number of extensions: 2532482
Number of successful extensions: 4574
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4574
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)