Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6048
         (745 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-832|AAF54301.3| 2090|Drosophila melanogaster CG31349-PA...    32   0.72 
AL031027-4|CAA19841.1|  303|Drosophila melanogaster EG:80H7.3 pr...    31   2.2  

>AE014297-832|AAF54301.3| 2090|Drosophila melanogaster CG31349-PA,
            isoform A protein.
          Length = 2090

 Score = 32.3 bits (70), Expect = 0.72
 Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
 Frame = -1

Query: 484  WAQHFNLRLREENGIEKFPVPTPPRDKVET--KKILLYILFCLIAPTQPISGCYNLLNSN 311
            ++QH   +  +++G+E  P P PP  K ++  K  L+ +   L+  T+P+    +++   
Sbjct: 1360 YSQHHQQQYYDDHGLEMGPPPLPPHKKKKSVLKSPLVALKNALLKSTRPLRRMNSMVEPE 1419

Query: 310  RKKR 299
            RK +
Sbjct: 1420 RKPK 1423


>AL031027-4|CAA19841.1|  303|Drosophila melanogaster EG:80H7.3
           protein.
          Length = 303

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = -1

Query: 364 LIAPTQPISGCYNLLNSNRKKRLRFVTSPVPV-HSLPSLRAQDALIVYSAMLICFLHT 194
           LIAP + ++  + L NSN++KR R  +  V V  +L     ++  IV     + ++HT
Sbjct: 69  LIAPRKVLTAAHCLYNSNQRKRFRRASEFVVVLGTLNRFEHRNGTIVSQVSSMAYMHT 126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,907,515
Number of Sequences: 53049
Number of extensions: 758876
Number of successful extensions: 1920
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1919
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)