Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6046
(779 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC320.13c |ark1|aim1, SPCC330.16|aurora-B kinase Ark1|Schizosa... 53 5e-08
SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase Cdc... 49 9e-07
SPAC23A1.06c |cmk2|mkp2|MAPK-activated protein kinase Cmk2|Schiz... 48 1e-06
SPCC1322.08 |srk1|mkp1|MAPK-activated protein kinase Srk1|Schizo... 46 8e-06
SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schi... 44 3e-05
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 43 4e-05
SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase Byr2... 43 6e-05
SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces po... 43 6e-05
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 43 6e-05
SPCC18B5.11c |cds1||replication checkpoint kinase Cds1|Schizosac... 41 2e-04
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 40 5e-04
SPBC8D2.19 |mde3||serine/threonine protein kinase Mde3|Schizosac... 39 7e-04
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 39 0.001
SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1... 39 0.001
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S... 38 0.002
SPCC4G3.08 |psk1||serine/threonine protein kinase Psk1|Schizosac... 38 0.002
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 37 0.003
SPACUNK12.02c |cmk1||calcium/calmodulin-dependent protein kinase... 37 0.004
SPCC576.15c |ksg1||serine/threonine protein kinase Ksg1|Schizosa... 37 0.004
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 36 0.005
SPCC63.08c |ppk36|atg1|serine/threonine protein kinase Ppk36|Sch... 36 0.005
SPCC162.10 |ppk33||serine/threonine protein kinase Ppk33 |Schizo... 36 0.009
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 35 0.011
SPAC19E9.02 |fin1||serine/threonine protein kinase Fin1|Schizosa... 35 0.011
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 34 0.020
SPCC1450.11c |cek1||serine/threonine protein kinase Cek1|Schizos... 34 0.026
SPAC644.06c |cdr1|nim1|GIN4 family protein kinase Cdr1|Schizosac... 33 0.035
SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomy... 33 0.046
SPAC14C4.03 |mek1||Cds1/Rad53/Chk2 family protein kinase Mek1 |S... 33 0.061
SPAC821.12 |orb6||serine/threonine protein kinase Orb6|Schizosac... 33 0.061
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 32 0.080
SPCC16C4.11 |pef1||Pho85/PhoA-like cyclin-dependent kinase Pef1|... 32 0.11
SPAC1687.15 |gsk3|skp1|serine/threonine protein kinase Gsk3|Schi... 30 0.43
SPBC11B10.09 |cdc2|swo2|cyclin-dependent protein kinase Cdc2|Sch... 29 0.57
SPBC1861.09 |ppk22||serine/threonine protein kinase Ppk22 |Schiz... 29 0.75
SPBC18H10.15 |ppk23||serine/threonine protein kinase Ppk23|Schiz... 29 0.99
SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9 |Schizos... 29 0.99
SPBC660.14 |mik1||mitotic inhibitor kinase Mik1|Schizosaccharomy... 28 1.3
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 28 1.3
SPAC1B9.02c |sck1||serine/threonine protein kinase Sck1|Schizosa... 28 1.3
SPBC19F8.07 |crk1|mop1, mcs6|cyclin-dependent kinase activating ... 28 1.7
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 27 2.3
SPAC23C4.12 |hhp2||serine/threonine protein kinase Hhp2 |Schizos... 27 3.0
SPAC2E1P3.04 |||copper amine oxidase |Schizosaccharomyces pombe|... 26 5.3
SPAC1786.03 |cut11|SPAC24C9.01|integral membrane nucleoporin|Sch... 26 5.3
SPAC1527.02 |sft2||Golgi transport protein Sft2 |Schizosaccharom... 26 5.3
SPAC1805.05 |cki3||serine/threonine protein kinase Cki3|Schizosa... 26 7.0
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 25 9.2
>SPCC320.13c |ark1|aim1, SPCC330.16|aurora-B kinase
Ark1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 52.8 bits (121), Expect = 5e-08
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Frame = +3
Query: 285 LSKFLGSGAFGEVFEGVARQINGSTVDTKVAVKTLRKGASEQEKTE--FLKEAALMSNFK 458
+ K LG G FG V+ +A++ + VA+KTL K Q K E +E + SN +
Sbjct: 91 IGKPLGKGKFGRVY--LAKEKKTGFI---VALKTLHKSELVQSKIEKQVRREIEIQSNLR 145
Query: 459 HEHILRLLGVCLDNDPNYIIMELMEGGDLLSYLRAKREF 575
H++ILRL G D Y+I+E G+L +LR + F
Sbjct: 146 HKNILRLYGHFHDEKRIYLILEFAGRGELYQHLRRAKRF 184
>SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase
Cdc7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1062
Score = 48.8 bits (111), Expect = 9e-07
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Frame = +3
Query: 261 HIRREQITLSKFLGSGAFGEVFEGVARQINGSTVDTKVAVKTLRKGASEQEKTEFLK-EA 437
+I+ ITL LG GAFG V+ G+ + NG T VAVK ++ + +K E
Sbjct: 3 NIQASSITLGDCLGKGAFGAVYRGLNIK-NGET----VAVKKVKLSKMLKSDLSVIKMEI 57
Query: 438 ALMSNFKHEHILRLLGVCLDNDPNYIIMELMEGGDLLS 551
L+ N H +I++ G ND II+E E G L S
Sbjct: 58 DLLKNLDHPNIVKYRGSYQTNDSLCIILEYCENGSLRS 95
>SPAC23A1.06c |cmk2|mkp2|MAPK-activated protein kinase
Cmk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 504
Score = 48.4 bits (110), Expect = 1e-06
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Frame = +3
Query: 216 QGVHCPTDAELASLPHIRREQITLSKFLGSGAFGEVFEGVARQINGSTVDTK--VAVKTL 389
+ V+ D E+ + E+ L + LG GAF +V++ + +D K VAVK +
Sbjct: 44 KNVNAGGDEEIRVANYPGLEKYQLIENLGDGAFSQVYKAYS-------IDRKEHVAVKVI 96
Query: 390 RK-GASEQEKTEFLKEAALMSNFKHEHILRLLGVCLDNDPNYIIMELMEGGDL 545
RK +++++ KE +M KH++++ L D +++MEL EGG+L
Sbjct: 97 RKYEMNKKQRQGVFKEVNIMRRVKHKNVVNLFDFVETEDFYHLVMELAEGGEL 149
>SPCC1322.08 |srk1|mkp1|MAPK-activated protein kinase
Srk1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 580
Score = 45.6 bits (103), Expect = 8e-06
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Frame = +3
Query: 273 EQITLSKFLGSGAFGEVFEGVARQINGSTVDTKVAVKTL-----RKGASEQ--EKTEFLK 431
EQ TL + +G GAF V++ + + G V KV + R Q E LK
Sbjct: 122 EQYTLLQKMGDGAFSNVYKAIHNR-TGEKVAIKVVQRAQPNTDPRDPRKRQGVESHNILK 180
Query: 432 EAALMSNFKHEHILRLLGVCLDNDPNYIIMELMEGGDL 545
E +M KH +I++LL + Y+++EL +GG+L
Sbjct: 181 EVQIMRRVKHPNIIQLLEFIQTPEYYYLVLELADGGEL 218
>SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase
Ran1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 470
Score = 43.6 bits (98), Expect = 3e-05
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Frame = +3
Query: 255 LPHIRREQITLSKFLGSGAFGEVFEGVARQINGSTVDTKVAVKTLRK-GASEQEKTEFLK 431
L + + + +G+GA+G V++ A I T+ AVK L K G +E++K +
Sbjct: 10 LGQVLGDSLRFVSIIGAGAYGVVYK--AEDIYDGTL---YAVKALCKDGLNEKQKKLQAR 64
Query: 432 EAALMSNFK-HEHILRLLGVCLDNDPNYIIMELMEGGDLLSYLRAKREF 575
E AL + H +I+ L V D Y++++ GDL +Y+ K+ +
Sbjct: 65 ELALHARVSSHPYIITLHRVLETEDAIYVVLQYCPNGDLFTYITEKKVY 113
>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1576
Score = 43.2 bits (97), Expect = 4e-05
Identities = 25/80 (31%), Positives = 43/80 (53%)
Frame = +3
Query: 291 KFLGSGAFGEVFEGVARQINGSTVDTKVAVKTLRKGASEQEKTEFLKEAALMSNFKHEHI 470
+FLG G FGEV + V +I+G AVK L + ++E + L+E +S HEH+
Sbjct: 560 EFLGRGGFGEVVK-VKNRIDGRFY----AVKKLVLLSDDKENSRILREVMTLSRLHHEHV 614
Query: 471 LRLLGVCLDNDPNYIIMELM 530
+R ++ + N + E++
Sbjct: 615 VRYYTAWVETEANDTVTEII 634
>SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase
Byr2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 659
Score = 42.7 bits (96), Expect = 6e-05
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +3
Query: 297 LGSGAFGEVFEGVARQINGSTVDTKVAVKTLRKGASEQEKT--EFLKEAALMSNFKHEHI 470
+GSG+FG+V+ G+ +V + ++ + K E AL+ HEHI
Sbjct: 400 IGSGSFGQVYLGMNASSGELMAVKQVILDSVSESKDRHAKLLDALAGEIALLQELSHEHI 459
Query: 471 LRLLGVCLDNDPNYIIMELMEGGDLLSYL 557
++ LG L++D I +E + GG + L
Sbjct: 460 VQYLGSNLNSDHLNIFLEYVPGGSVAGLL 488
>SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 471
Score = 42.7 bits (96), Expect = 6e-05
Identities = 26/96 (27%), Positives = 50/96 (52%)
Frame = +3
Query: 282 TLSKFLGSGAFGEVFEGVARQINGSTVDTKVAVKTLRKGASEQEKTEFLKEAALMSNFKH 461
TL + LGSG+FG V++ ++G + A+K + + T+ +E ++SN
Sbjct: 10 TLLRKLGSGSFGVVWKA-RENVSGDII----AIKQIDLETGIDDITDIEQEVFMLSNCNS 64
Query: 462 EHILRLLGVCLDNDPNYIIMELMEGGDLLSYLRAKR 569
++++ G +D +I+ME M+GG + L+ R
Sbjct: 65 SNVIQYYGCFVDGYTLWILMEHMDGGSVSGLLKMGR 100
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 42.7 bits (96), Expect = 6e-05
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = +3
Query: 297 LGSGAFGEVFEGVARQINGSTVDTKVAVKTLRKGASEQEKT---EFLKEAALMSNFKHEH 467
+G GAFG V S +T AVK R+ +E +K E + S+ +H +
Sbjct: 357 IGRGAFGVVRIAHKVDPQNSGSETLYAVKEFRRKPAESQKKYTKRLTSEFCISSSLRHPN 416
Query: 468 ILRLLGVCLDNDPNYI-IMELMEGGDLLSYLRA 563
++ L + D +Y +MEL GGDL + + A
Sbjct: 417 VIHTLDLIQDGKGDYCEVMELCSGGDLYTLIMA 449
>SPCC18B5.11c |cds1||replication checkpoint kinase
Cds1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 41.1 bits (92), Expect = 2e-04
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Frame = +3
Query: 297 LGSGAFGEVFEGVARQIN-GSTVDTKVAVKT-LRKGASEQEKTE-FLKEAALMSNFKHEH 467
LGSG F V +A ++N G K+ K + +SE+ TE F +E ++ + H
Sbjct: 173 LGSGTFAVV--KLAVEVNSGKWYAIKIINKRKILLTSSEKRATEMFQREIDILKSLHHPG 230
Query: 468 ILRLLGVCLDNDPNYIIMELMEGGDLLSYLRA 563
+++ + ++D +I+ME +EGGDL+ +L A
Sbjct: 231 VVQCHEIFENDDELFIVMEYVEGGDLMDFLIA 262
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 39.5 bits (88), Expect = 5e-04
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Frame = +3
Query: 240 AELASLPHIRREQITLSKF--LGSGAFGEVFEGVARQINGSTVDTKVAVKTLRKGASEQE 413
A+L S+ + + + F +G GA G+V+ ARQ+ T ++V + ++Q
Sbjct: 371 AKLQSICNPKNPTLLYRNFVKIGQGASGDVYS--ARQVG-----TNLSVAIKKMNINQQP 423
Query: 414 KTEFL-KEAALMSNFKHEHILRLLGVCLDNDPNYIIMELMEGGDL 545
K EF+ E +M + H++I+ + +++ME M GG L
Sbjct: 424 KKEFIVNEILVMKSHHHKNIVNFIDTFFYKSELWMVMEYMRGGSL 468
>SPBC8D2.19 |mde3||serine/threonine protein kinase
Mde3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 559
Score = 39.1 bits (87), Expect = 7e-04
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Frame = +3
Query: 264 IRREQITLSKFLGSGAFGEVFEGVARQINGSTVDTKVAVKTLRKGASEQEKTEFLK---E 434
I ++ + + LG G+FG V+ ++ NG + VAVK L+ + + K E LK
Sbjct: 16 IFEDRYLVKQKLGDGSFGTVYLAQRKEKNG--LYETVAVKKLKNSSKPKPKHELLKLRES 73
Query: 435 AALMSNFKHEHILRLLGVCLDNDPN-YIIMELME 533
AL KH ++ LL +D N +++ME M+
Sbjct: 74 LALRKISKHPCLIDLLETFMDPYRNIFLVMEFMD 107
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Frame = +1
Query: 667 FVHRDLACRNCLVAHRA----NGEGSQELGDFGLAR 762
F+HRD+ N LV + + S +LGDFGLAR
Sbjct: 146 FMHRDIKPENILVKRISPKPISSRYSIKLGDFGLAR 181
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 38.7 bits (86), Expect = 0.001
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +3
Query: 297 LGSGAFGEVFEGVARQINGSTVDT-KVAVKTLR-KGASEQEKTEFLKEAALMSNFK-HEH 467
LGSG F EVF Q+ T K AVK L+ K + +E+ L+E ++ K H+H
Sbjct: 572 LGSGEFSEVF-----QVEDPVEKTLKYAVKKLKVKFSGPKERNRLLQEVSIQRALKGHDH 626
Query: 468 ILRLLGVCLDNDPNYIIMELMEGGDLLSYL 557
I+ L+ Y+ +EL E G L +L
Sbjct: 627 IVELMDSWEHGGFLYMQVELCENGSLDRFL 656
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 664 HFVHRDLACRNCLVAHRANGEGSQELGDFGLA 759
++VH DL N ++ EG+ ++GDFG+A
Sbjct: 688 NYVHLDLKPANVMITF----EGTLKIGDFGMA 715
>SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1023
Score = 38.7 bits (86), Expect = 0.001
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Frame = +3
Query: 285 LSKFLGSGAFGEVFEGVARQINGSTVDT---KVAVKTLRKGASEQEKTEFLKEAALMSNF 455
L + +G+G FG+V G ST+ +V +K + + + ++E A++
Sbjct: 494 LGRTIGTGEFGKVKLGWPLPKANSTIHRSTPQVVIKIVLSTKQNCQTSRLMREVAILKGL 553
Query: 456 --KHEHILRLLGVCLDNDPNYIIMELMEGGDLLSYLRAKR 569
H HI++ L I+++ + GG+L Y+ A+R
Sbjct: 554 GNNHPHIVKYLDFVKTKHHFGIVLDYVNGGELFDYILARR 593
>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 37.9 bits (84), Expect = 0.002
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = +3
Query: 315 GEVFE-GVARQINGSTVDTKVAVKTLRKGASEQEKTEFLK---EAALMSNFKHEHILRLL 482
GE F + +++ K A A++ EK + ++ EAAL + +H +I
Sbjct: 148 GEQFAIKIVTRLHPDITKAKAAASAEATKAAQSEKNKEIRTVREAALSTLLRHPYICEAR 207
Query: 483 GVCLDNDPNYIIMELMEGGDLLSYL 557
V + N Y++ E ++GG +L Y+
Sbjct: 208 DVYITNSHYYMVFEFVDGGQMLDYI 232
>SPCC4G3.08 |psk1||serine/threonine protein kinase
Psk1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 436
Score = 37.5 bits (83), Expect = 0.002
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Frame = +3
Query: 297 LGSGAFGEVFEGVARQINGSTVDTKVAVK----TLRKGASEQEKTEFLKEAALMSNFKHE 464
LG G++G+V + +Q N + + +K LR EQ K E ++ +H
Sbjct: 97 LGRGSYGKVL--LVKQKNTGRLFAQKQLKKASIVLRAKGLEQTKNE----RQILEEVRHP 150
Query: 465 HILRLLGVCLDNDPNYIIMELMEGGDLLSYLRAKR 569
I RL D+D Y+I++ GG+L S+L +R
Sbjct: 151 FICRLYYAFQDHDRLYLILQYAPGGELFSHLAEQR 185
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase kinase
Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 37.1 bits (82), Expect = 0.003
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Frame = +3
Query: 297 LGSGAFGEVFEGVARQINGSTVDTKVAVK--TLRKGASEQEKTEFLK-EAALMSNFKHEH 467
+GSG+FG V+ R +N T D +AVK L K + + +K E ++ F H +
Sbjct: 1126 IGSGSFGTVY----RAVNLDTGDL-MAVKEVALHKPRISRPMIKRIKGEMLVLELFDHPN 1180
Query: 468 ILRLLGVCLDNDPNYIIMELMEGGDLLSYLRAKR 569
++ G+ + + I MEL +G L +LR R
Sbjct: 1181 VVSYYGIEVHREKVNIFMELCQGSSLFEFLRYGR 1214
>SPACUNK12.02c |cmk1||calcium/calmodulin-dependent protein kinase
Cmk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 36.7 bits (81), Expect = 0.004
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Frame = +3
Query: 285 LSKFLGSGAFGEVFEGVARQINGSTVDTKVAVKTLRKGASEQEKTEFLK-EAALMSNFKH 461
+ + LG G + V E V + N A K + K E+ K +F+K E A++ +
Sbjct: 33 VGRVLGGGTYATVREAVHIETN-----KMYAAKIMNKKMMEK-KQDFVKNEIAILKRVSY 86
Query: 462 EH--ILRLLGVCLDNDPNYIIMELMEGGDLLSYLRAKREF 575
EH IL L+ + Y+I EL GG+L + AK F
Sbjct: 87 EHPNILHLVDFFETVNNLYLITELATGGELFDRICAKGSF 126
>SPCC576.15c |ksg1||serine/threonine protein kinase
Ksg1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 592
Score = 36.7 bits (81), Expect = 0.004
Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 4/122 (3%)
Frame = +3
Query: 222 VHCPTDAELASLPHIRR-EQITLSKFLGSGAFGEVFEGVARQINGSTVDTKVAVKTLRKG 398
+ P + AS P+I+R + LG G++ V ++ + A+K L K
Sbjct: 79 ISTPNPSSGASTPNIKRVSDFKFGEILGEGSYSTVLTATE-----NSTKREYAIKVLDKR 133
Query: 399 ASEQEKTEF---LKEAALMSNFKHEHILRLLGVCLDNDPNYIIMELMEGGDLLSYLRAKR 569
+EK E +++ AL KH ++L D Y ++ L G+LL Y+
Sbjct: 134 HIIKEKKEKYVNIEKEALCILSKHPGFIKLFYTFQDAHNLYFVLSLARNGELLDYINKLG 193
Query: 570 EF 575
F
Sbjct: 194 RF 195
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 36.3 bits (80), Expect = 0.005
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Frame = +3
Query: 273 EQITLSKFLGSGAFGEVFEGVARQINGSTVDTKVAVKTLRKGASEQEKTEFLKEAALMSN 452
E T LG G FG+V + KV K E E T+ K L++N
Sbjct: 681 EDFTFLSVLGKGNFGKVMLAELKS-EKQLYAIKVLKKEFILENDEVESTKSEKRVFLVAN 739
Query: 453 FKHEHILRLLGVCLDNDPN-YIIMELMEGGDLLSYLRAKR 569
+ L L C + Y +M+ + GGDL+ +++ ++
Sbjct: 740 RERHPFLVNLHSCFQTETRIYFVMDFVSGGDLMLHIQQEQ 779
>SPCC63.08c |ppk36|atg1|serine/threonine protein kinase
Ppk36|Schizosaccharomyces pombe|chr 3|||Manual
Length = 830
Score = 36.3 bits (80), Expect = 0.005
Identities = 22/93 (23%), Positives = 43/93 (46%)
Frame = +3
Query: 297 LGSGAFGEVFEGVARQINGSTVDTKVAVKTLRKGASEQEKTEFLKEAALMSNFKHEHILR 476
+G G+F V++G + N V K L K E ++E +++ +H H++
Sbjct: 20 IGRGSFAIVYKGKHTETNRVISIKSVLTKKLTKKLLENLESEI----SILKEIRHVHVVE 75
Query: 477 LLGVCLDNDPNYIIMELMEGGDLLSYLRAKREF 575
L+ +++ME GDL ++R + +F
Sbjct: 76 LIDCIKAGRFIHLVMEYCSLGDLSYFIRKREKF 108
>SPCC162.10 |ppk33||serine/threonine protein kinase Ppk33
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 35.5 bits (78), Expect = 0.009
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Frame = +3
Query: 276 QITLSKFLGSGAFGEVFEGVARQINGSTVDTKVAVKTLRKGASEQEKTEFLK-EAALMSN 452
Q + +G G++ VF RQ + A+K + K ++ K + L+ E L+ +
Sbjct: 29 QFKIRNVIGKGSWSTVFVVKHRQTK-----QRFALKCINKKKHDEHKIKKLRNEVLLLQS 83
Query: 453 FKHEHILRLLGVCLDNDPNYIIMELMEGGDLLSYLRAKREF 575
H + + D Y++ +LM GGD L Y ++R+F
Sbjct: 84 LNHPLLCKFYSEFEDETKIYLVTDLMLGGD-LRYHISQRKF 123
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 35.1 bits (77), Expect = 0.011
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +3
Query: 285 LSKFLGSGAFGEVFEGVARQINGSTVDTKVAVKTLRKGASEQEKTEFLKEAALMSNF-KH 461
+ K +G+G+ G+V + V + G K A+K + + +T ++ AL+ +H
Sbjct: 55 IKKTIGAGSMGKV-KLVVNILTGE----KAALKMIPFTPNNTSQTVRVQREALLGRLLRH 109
Query: 462 EHILRLLGVCLDNDPNYIIMELMEGGDLLSYLRAK 566
+I R++ YI+ E + GG LL Y+ A+
Sbjct: 110 PNICRVIDCIRTPACTYILFEYVPGGQLLEYILAR 144
>SPAC19E9.02 |fin1||serine/threonine protein kinase
Fin1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 35.1 bits (77), Expect = 0.011
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Frame = +3
Query: 273 EQITLSKFLGSGAFGEVFEGVARQINGSTVDTKVAVKTLRKG-ASEQEKTEFLKEAALMS 449
E+ + + +G G+FG +++ V R +G+ + A K + G + QEK E ++
Sbjct: 2 EKYKILECIGHGSFGRIYK-VQRLKDGALL----AQKEIHFGNITRQEKQYIADEVNILR 56
Query: 450 NFKHEHILRLLGVCLDNDPNYI--IMELMEGGDLLSYLRAKRE 572
N KH +I++ G L+ I ME GDL + ++ +E
Sbjct: 57 NLKHPNIVQYCGEELNRSAQVINLYMEYCGHGDLANLIQRYKE 99
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 34.3 bits (75), Expect = 0.020
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Frame = +3
Query: 291 KFLGSGAFGEVFEGVARQINGSTVDTKVAVKTLRKG---ASEQEKTEFLKEAALMSNFKH 461
K + G FG V+ ++R+ +T A+K LRK + Q + A LM+ +
Sbjct: 568 KPISKGTFGTVY--LSRK---NTTGEIYAIKVLRKVDMISKNQVANVKAERAVLMAQEES 622
Query: 462 EHILRLLGVCLDNDPNYIIMELMEGGDLLSYLRA 563
+ +L D Y++ME M GGD S L++
Sbjct: 623 AFVAKLYYAFQSRDYLYLVMEFMNGGDCASLLKS 656
>SPCC1450.11c |cek1||serine/threonine protein kinase
Cek1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1338
Score = 33.9 bits (74), Expect = 0.026
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = +3
Query: 291 KFLGSGAFGEVFEGVARQINGSTVDTKVAVKTLRKG---ASEQEKTEFLKEAALMSNFKH 461
K + GAFG V+ R T A+K L+K A Q + A LMS +
Sbjct: 593 KPISKGAFGSVYLAQKR-----TTGDYFAIKILKKSNMIAKNQVINVRAERAILMSQGES 647
Query: 462 EHILRLLGVCLDNDPNYIIMELMEGGDLLSYLR 560
+ +L D Y++ME + GGD S L+
Sbjct: 648 PFVAKLYYTFQSKDYLYLVMEYLNGGDCGSLLK 680
>SPAC644.06c |cdr1|nim1|GIN4 family protein kinase
Cdr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 33.5 bits (73), Expect = 0.035
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 432 EAALMSNFKHEHILRLLGVCLDNDPNYIIMELMEGGDLLSYLR 560
E +M +H +ILRL V D+ Y+ +E + G+L Y+R
Sbjct: 53 EILMMRLLRHPNILRLYDVWTDHQHMYLALEYVPDGELFHYIR 95
>SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 607
Score = 33.1 bits (72), Expect = 0.046
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +3
Query: 297 LGSGAFGEVFEGVARQINGSTVDTKVAVKTLRKGASEQ--EKTEFLKEAALMSNFKHEHI 470
+G G +G V+ +AR+ + + VA+K + K + E L E +++ E +
Sbjct: 214 VGQGGYGSVW--LARKRDTKEI---VALKIMNKSVLHKMDEIRHVLTERDILTTANSEWL 268
Query: 471 LRLLGVCLDNDPNYIIMELMEGGDLLSYL 557
+RLL D Y+ ME + GGD + L
Sbjct: 269 VRLLYAFQDTSNIYLAMEFVPGGDFRTLL 297
>SPAC14C4.03 |mek1||Cds1/Rad53/Chk2 family protein kinase Mek1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 445
Score = 32.7 bits (71), Expect = 0.061
Identities = 30/126 (23%), Positives = 51/126 (40%)
Frame = +3
Query: 180 LPIRHSTNILYNQGVHCPTDAELASLPHIRREQITLSKFLGSGAFGEVFEGVARQINGST 359
L +RH + L+ Q TD + R IT + LG G F ++ + G
Sbjct: 130 LDVRHCASFLFQQKY--TTDNDFHHEYAGERFNIT-QRLLGIGGFSRIYMAMDNNTGG-- 184
Query: 360 VDTKVAVKTLRKGASEQEKTEFLKEAALMSNFKHEHILRLLGVCLDNDPNYIIMELMEGG 539
+ A K + K ++ E ++ H +I+++ +I E++ GG
Sbjct: 185 ---QYACKIIDKKKISTKRFFEDHEMTILRKLDHPNIIKVNMEYNSETQFFIFEEMVTGG 241
Query: 540 DLLSYL 557
DL SYL
Sbjct: 242 DLFSYL 247
Score = 28.7 bits (61), Expect = 0.99
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 658 EMHFVHRDLACRNCLVAHRANGEGSQELGDFGLAR 762
E + +HRDL N L+A ++ L DFG+AR
Sbjct: 274 EQNIIHRDLKLENILIASSSDTIFRIILTDFGVAR 308
>SPAC821.12 |orb6||serine/threonine protein kinase
Orb6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 469
Score = 32.7 bits (71), Expect = 0.061
Identities = 27/95 (28%), Positives = 41/95 (43%)
Frame = +3
Query: 273 EQITLSKFLGSGAFGEVFEGVARQINGSTVDTKVAVKTLRKGASEQEKTEFLKEAALMSN 452
E + K +G GAFGEV V + G K +KT + + E L+
Sbjct: 91 EDFSTIKVIGKGAFGEV-RLVQKLDTGKIYAMKSLLKT--EMFKRDQLAHVKAERDLLVE 147
Query: 453 FKHEHILRLLGVCLDNDPNYIIMELMEGGDLLSYL 557
++ L D+ Y+IME + GGDL++ L
Sbjct: 148 SDSPWVVSLYYAFQDSLYLYLIMEFLPGGDLMTML 182
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 32.3 bits (70), Expect = 0.080
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +3
Query: 273 EQITLSKFLGSGAFGEVFEGVARQINGSTVDTKVAVKTLRKGASEQEKTEFLKEAALMSN 452
+ T LG G FG+V + +N KV K E E + K ++N
Sbjct: 662 DDFTFLAVLGKGNFGKVMLAEYK-VNKKFYAIKVLKKEAILKNEELESLKTEKHVFEVAN 720
Query: 453 F-KHEHILRLLGVCLDNDPNYIIMELMEGGDLLSYLRAKR 569
KH +L L + Y +ME + GGDL+ +++ ++
Sbjct: 721 KEKHPFLLNLFASFQTSTRVYFVMEYILGGDLMVHIQRQQ 760
>SPCC16C4.11 |pef1||Pho85/PhoA-like cyclin-dependent kinase
Pef1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 288
Score = 31.9 bits (69), Expect = 0.11
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 637 KAVVI*KEMHFVHRDLACRNCLVAHRANGEGSQELGDFGLARDI 768
K + E +HRDL +N L+ N G +L DFGLAR I
Sbjct: 112 KGISFCHENRVLHRDLKPQNLLI----NSRGELKLADFGLARSI 151
>SPAC1687.15 |gsk3|skp1|serine/threonine protein kinase
Gsk3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 387
Score = 29.9 bits (64), Expect = 0.43
Identities = 27/99 (27%), Positives = 45/99 (45%)
Frame = +3
Query: 186 IRHSTNILYNQGVHCPTDAELASLPHIRREQITLSKFLGSGAFGEVFEGVARQINGSTVD 365
+ H T I + A S +++ T SK +GSG+F GV Q++ D
Sbjct: 1 MNHGTKIPVDPFRIIKETARDGSTGEVKQLSYTSSKVVGSGSF-----GVVMQVHLIESD 55
Query: 366 TKVAVKTLRKGASEQEKTEFLKEAALMSNFKHEHILRLL 482
+K A+K + Q+K +E +M KH +I+ L+
Sbjct: 56 SKAAIKRVL-----QDKRFKNRELQIMRIMKHPNIVDLI 89
>SPBC11B10.09 |cdc2|swo2|cyclin-dependent protein kinase
Cdc2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 29.5 bits (63), Expect = 0.57
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 670 VHRDLACRNCLVAHRANGEGSQELGDFGLAR 762
+HRDL +N L+ + EG+ +L DFGLAR
Sbjct: 131 IHRDLKPQNLLI----DKEGNLKLADFGLAR 157
>SPBC1861.09 |ppk22||serine/threonine protein kinase Ppk22
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 526
Score = 29.1 bits (62), Expect = 0.75
Identities = 23/91 (25%), Positives = 38/91 (41%)
Frame = +3
Query: 291 KFLGSGAFGEVFEGVARQINGSTVDTKVAVKTLRKGASEQEKTEFLKEAALMSNFKHEHI 470
+ LG G G+V+ V ++ N K+ K R+ + L E +++ KH I
Sbjct: 159 RLLGQGDVGKVYL-VRQKSNHRLFAMKILNK--REMIKRHKVNRVLAEQEILTKSKHPFI 215
Query: 471 LRLLGVCLDNDPNYIIMELMEGGDLLSYLRA 563
+ L D Y+ ME GG+ L +
Sbjct: 216 VTLYHSFQSRDYLYLCMEYCAGGEFFRALHS 246
>SPBC18H10.15 |ppk23||serine/threonine protein kinase
Ppk23|Schizosaccharomyces pombe|chr 2|||Manual
Length = 398
Score = 28.7 bits (61), Expect = 0.99
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 667 FVHRDLACRNCLVAHRANGEGSQELGDFGLARDI 768
++HRDL N L+ N G +L DFGLAR +
Sbjct: 194 YLHRDLKPSNLLM----NNTGEIKLADFGLARPV 223
>SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 591
Score = 28.7 bits (61), Expect = 0.99
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +3
Query: 285 LSKFLGSGAFGEVFEGVARQINGSTVDTKVAVKTLRKGASEQEKTEFLKEAALMSNFKHE 464
L + LG G FGEV++ R+ +G K + L E ++E ++ + KHE
Sbjct: 38 LMEKLGEGTFGEVYKSQRRK-DGKVYALK---RILMHTEKEGFPITAIREIKILKSIKHE 93
Query: 465 HILRL 479
+I+ L
Sbjct: 94 NIIPL 98
>SPBC660.14 |mik1||mitotic inhibitor kinase Mik1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 581
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 661 MHFVHRDLACRNCLVAHRANGEGSQELGDFGLARDI 768
+ FVH D+ N L+ +G+ +LGDFGLA +
Sbjct: 411 LEFVHLDVKPSNVLITR----DGNLKLGDFGLATSL 442
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 28.3 bits (60), Expect = 1.3
Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +3
Query: 264 IRREQITLSKFLGSGAFGEVFEGVARQINGSTVDTKVAVKTLRKGA-SEQEKTEFLKEAA 440
++++ + + L G++G V D K A+K ++K A + ++ L++
Sbjct: 4 LQKKGYKVERPLNKGSYGTVVLAHRLFRTPRCKDLKYAIKCIKKPAYTFLQEVNILRQ-- 61
Query: 441 LMSNFKHEHILRLLGVCLDNDPNYIIMELMEGGDL 545
+S +H +I+ + DN Y+++E GDL
Sbjct: 62 -LSRSRHRNIIHFVESFEDNVYYYVVLEYCPLGDL 95
>SPAC1B9.02c |sck1||serine/threonine protein kinase
Sck1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 696
Score = 28.3 bits (60), Expect = 1.3
Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Frame = +3
Query: 255 LPHIRR--EQITLSKFLGSGAFGEVFEGVARQINGSTVDTKVAVKTLRKGASEQEKTEFL 428
+ H+R E T + +G G FG+V+ N K++ K + ++E T L
Sbjct: 292 IEHVRYGPEDFTALRLIGKGTFGQVYLVRKNDTNRIYAMKKISKKLI---VRKKEVTHTL 348
Query: 429 KEAALMSNFKHEHILRLLGVCLD---NDPNYIIMELMEGGDLLSYLRAKREF 575
E ++ + ++G+ Y+I + M GG+L +L+ + F
Sbjct: 349 GERNILVRTSLDESPFIVGLKFSFQTASDLYLITDYMSGGELFWHLQHEGRF 400
>SPBC19F8.07 |crk1|mop1, mcs6|cyclin-dependent kinase activating
kinase Crk1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 335
Score = 27.9 bits (59), Expect = 1.7
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 670 VHRDLACRNCLVAHRANGEGSQELGDFGLARD 765
+HRDL N L++ +G +L DFGL+RD
Sbjct: 130 LHRDLKPNNLLIS----SDGVLKLADFGLSRD 157
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/62 (22%), Positives = 30/62 (48%)
Frame = +3
Query: 237 DAELASLPHIRREQITLSKFLGSGAFGEVFEGVARQINGSTVDTKVAVKTLRKGASEQEK 416
D ELA+L ++++ + LS+ A E Q+N + + ++ ++ QE+
Sbjct: 307 DRELATLTELQQQSLVLSRRAFQRALEEAGFEDESQLNAQVKNVQAKIRRAQRDQQRQEE 366
Query: 417 TE 422
+E
Sbjct: 367 SE 368
>SPAC23C4.12 |hhp2||serine/threonine protein kinase Hhp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 400
Score = 27.1 bits (57), Expect = 3.0
Identities = 24/82 (29%), Positives = 39/82 (47%)
Frame = +3
Query: 285 LSKFLGSGAFGEVFEGVARQINGSTVDTKVAVKTLRKGASEQEKTEFLKEAALMSNFKHE 464
+ + +GSG+FG+++ G+ +NG V K+ K Q + EF L N
Sbjct: 14 IGRKIGSGSFGQIYLGL-NTVNGEQVAVKLEP---LKARHHQLEYEFRVYNILKGNIGIP 69
Query: 465 HILRLLGVCLDNDPNYIIMELM 530
I R GV N N ++M+L+
Sbjct: 70 TI-RWFGV--TNSYNAMVMDLL 88
>SPAC2E1P3.04 |||copper amine oxidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 712
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 665 ILFTETSLAGIV*SPTALTGRVVKNWGTSVLPEI 766
++ E L GI+ + G +K WGT V P++
Sbjct: 420 VIECELKLTGILNTYAMNEGEDLKGWGTQVYPQV 453
>SPAC1786.03 |cut11|SPAC24C9.01|integral membrane
nucleoporin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 26.2 bits (55), Expect = 5.3
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -2
Query: 175 CLNVASSTSGPLLSVTVWFWFAMAVFFLFRLLYP 74
C+ +SGP +S++ WF + F F ++P
Sbjct: 43 CITSYWFSSGPFISLSFWFLSLVRGFVCFFFMFP 76
>SPAC1527.02 |sft2||Golgi transport protein Sft2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 201
Score = 26.2 bits (55), Expect = 5.3
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = -1
Query: 284 CYLFASYVRQTR*FGVGWTMNTLIIKYVSGMS-DR*FVS*CRQLHVRTSSKRHCLVLVRY 108
C++F V + R F + WTM +L+ V G + + FV+ RQL T+ +R + L Y
Sbjct: 86 CFMFPVLVLKPRKFVLLWTMGSLLA--VLGFAIVQGFVAHFRQL---TTMERLPITL-SY 139
Query: 107 GCFLFVSIVVSIKERSS 57
L +I+ +IK +S+
Sbjct: 140 FVTLLATIIATIKIKST 156
>SPAC1805.05 |cki3||serine/threonine protein kinase
Cki3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 439
Score = 25.8 bits (54), Expect = 7.0
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 285 LSKFLGSGAFGEVFEGVARQINGSTVDTKVAVKTLRKGASEQEKTEFLKEAALM 446
+ K +G G+FG +F+GV IN + K RK Q + E+L LM
Sbjct: 17 VGKKIGEGSFGMLFQGV-NLINNQPIALKF---ESRKSEVPQLRDEYLTYKLLM 66
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 25.4 bits (53), Expect = 9.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 670 VHRDLACRNCLVAHRANGEGSQELGDFGLARD 765
VHRDL N + N +LGDFG +RD
Sbjct: 145 VHRDLKLENIFLDKAYN----VKLGDFGFSRD 172
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,859,348
Number of Sequences: 5004
Number of extensions: 55657
Number of successful extensions: 214
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 377352472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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