Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6045
(718 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0526 - 3830705-3830932,3831684-3831748,3831958-3832104,383... 32 0.52
11_01_0088 - 662984-663024,663743-663774,664079-664503,665048-66... 31 0.91
12_01_0089 - 707260-707317,707626-708050,708663-709621,710223-71... 31 1.2
11_04_0160 + 14247463-14247584,14247710-14247923,14250099-142502... 31 1.2
09_04_0334 + 16779883-16780150,16780618-16781828 30 1.6
07_03_0697 + 20759176-20759817,20760592-20760708,20761422-207616... 30 1.6
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879... 30 2.1
01_06_1656 + 38946922-38947542,38947640-38947739,38948045-389481... 30 2.1
07_01_0463 + 3502708-3503535 29 2.8
01_06_0256 - 27923497-27923855,27923944-27924016,27924116-27924121 29 2.8
01_01_0656 + 5013609-5014256 29 2.8
10_08_0961 + 21869612-21869773,21869869-21869956,21870047-218702... 29 3.7
08_01_0130 + 1040696-1041049,1042135-1042275,1042422-1042673,104... 29 3.7
04_04_0596 - 26497863-26497913,26498010-26498081,26499015-264990... 29 4.9
03_05_0694 + 26844075-26844217,26844417-26844489,26844577-268447... 28 6.4
05_06_0126 - 25834129-25834214,25834595-25834658,25836201-258365... 28 8.5
04_04_1349 - 32811733-32813040 28 8.5
>02_01_0526 -
3830705-3830932,3831684-3831748,3831958-3832104,
3832208-3832256
Length = 162
Score = 31.9 bits (69), Expect = 0.52
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +1
Query: 199 KQNNRKKKGVYWWNKEIAEARKECLKCRRRYTRNNKKLG-KGKDRENNEENEHKKQYKEA 375
K+ KK+ E AE +E + RRR R KK G +GKD+E + + +H K+ +++
Sbjct: 25 KKRRDKKESRRSSRDEQAEEEEE--EERRR--RKKKKHGDRGKDKERDSKEKHSKEKEKS 80
Query: 376 KLELQRRIWKAKDDKWREVCEE 441
K K KDD ++E+ ++
Sbjct: 81 KR-------KHKDDDFKEISKD 95
>11_01_0088 -
662984-663024,663743-663774,664079-664503,665048-666006,
666661-666846,666942-667044,667141-667323,667514-667606,
668092-668274,669011-669031
Length = 741
Score = 31.1 bits (67), Expect = 0.91
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +2
Query: 362 SIRKRNWSYKDEYGKRKTINGGKCARKST 448
S+R+ W+Y E +RK+++GG A K+T
Sbjct: 352 SLRQNGWNYVAENKERKSVSGGLLASKAT 380
>12_01_0089 -
707260-707317,707626-708050,708663-709621,710223-710408,
710502-710604,710701-710883,710932-711012,711072-711164,
711650-711832,713751-713966
Length = 828
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +2
Query: 362 SIRKRNWSYKDEYGKRKTINGGKCARKST 448
S+R+ W+Y E +RK+++GG A K+T
Sbjct: 444 SLRQNGWNYVAENKERKSVSGGWLASKAT 472
>11_04_0160 +
14247463-14247584,14247710-14247923,14250099-14250215,
14251578-14251670,14251748-14251922,14252981-14253017,
14253842-14253875,14254212-14254481,14255768-14255872,
14256295-14256392,14256474-14256616,14257197-14257290,
14257378-14257487,14258018-14258172,14258252-14258332,
14258415-14258535,14259358-14259464,14259537-14259668,
14261105-14261258,14264094-14264211,14264344-14264517,
14264831-14264882,14265450-14265577,14265670-14265820,
14265904-14266242
Length = 1107
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +1
Query: 322 KDRENNEENEHKKQYKEAKLELQRRIWKAKDDKWREVCEEVDNDIWGLGYKIVSKKLRGN 501
++ E+ E E + +KEA L R WK EVC+++++ + LG + +L+
Sbjct: 564 RELESEEYLEWSRSFKEANSALIDREWKV-----AEVCQKLEHSLEILGVSAIEDRLQAG 618
Query: 502 SP 507
P
Sbjct: 619 VP 620
>09_04_0334 + 16779883-16780150,16780618-16781828
Length = 492
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -3
Query: 128 YRLLLNLSTSSLWRFHLFICAWHWDRGNTCFIS 30
+ +LL L + SL RF AWH N CFIS
Sbjct: 127 FDILLRLPSKSLIRFKSVCKAWHAIISNPCFIS 159
>07_03_0697 +
20759176-20759817,20760592-20760708,20761422-20761696,
20761906-20762068,20762293-20762421,20762989-20763713,
20763853-20764081
Length = 759
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +1
Query: 295 RNNKKLGKGKDRENNE---ENEHKKQYKEAKLELQRRIWKAKDDKWREVCEE 441
R++ K KGK R++ + E EH K+ KE K E + + DDK R E+
Sbjct: 45 RSDAKGSKGKKRKHKDGEGEKEHGKRSKERKGEGEAAEARRGDDKVRRAMED 96
>05_06_0277 +
26885621-26886064,26886148-26886317,26887038-26887941,
26888544-26888575,26888862-26888928,26889116-26889173,
26889329-26889421,26890366-26890480,26890847-26890894,
26891012-26891057,26891161-26891231,26891865-26891870,
26891991-26892038,26892439-26892488,26892892-26893154
Length = 804
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 280 RRRYTRNNKKLGKGKDR--ENNEENEHKKQYKEAKLELQRRIWKAKDDKWRE 429
R R T G KDR +++++ +H + + + R W ++DD+ R+
Sbjct: 375 RDRKTEREDSRGSFKDRKLDHDDDRDHSRDRRSDRSGASRETWSSRDDERRD 426
>01_06_1656 +
38946922-38947542,38947640-38947739,38948045-38948189,
38948868-38948991,38949443-38949960,38950111-38950458,
38950557-38950638,38951309-38951707,38951790-38951927,
38952063-38952108,38952200-38952369
Length = 896
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +1
Query: 241 KEIAEARKECLKCRRRYTRNNKKLGKGKDRENNEENEHKKQYKEAKLELQR 393
KE+ + KE + R++ + ++ + + R EE E KKQ ++ + E Q+
Sbjct: 343 KELKQKEKEEARMRKQQKKQQEEALREQKRREKEEAEMKKQQRKQEEEAQK 393
>07_01_0463 + 3502708-3503535
Length = 275
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/119 (21%), Positives = 53/119 (44%)
Frame = +1
Query: 184 DASMPKQNNRKKKGVYWWNKEIAEARKECLKCRRRYTRNNKKLGKGKDRENNEENEHKKQ 363
D+ K+N + K + E E +K+ + + + + K +GK +++ +E E KK+
Sbjct: 78 DSKKDKENKKSDKKDDEHDDEDEEGKKKEKEMKEKKKDKSDKKEEGKKKKDGDEEEGKKK 137
Query: 364 YKEAKLELQRRIWKAKDDKWREVCEEVDNDIWGLGYKIVSKKLRGNSPINMGMAQIQSI 540
K+ + + K + K ++ EE + K K + N P + A+++ I
Sbjct: 138 EKKKDKDGDEKEGKKEKKKDKDGDEEEEGKKKEKKKKDKGDKEKTNDPAKL-KAKLEKI 195
>01_06_0256 - 27923497-27923855,27923944-27924016,27924116-27924121
Length = 145
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/66 (24%), Positives = 34/66 (51%)
Frame = +1
Query: 196 PKQNNRKKKGVYWWNKEIAEARKECLKCRRRYTRNNKKLGKGKDRENNEENEHKKQYKEA 375
PK+ K++G +++ +KE + +++ KK K K+ E ++ E ++ K+
Sbjct: 58 PKKGKEKREGYMVEVMAVSDEKKEAEEKKKKDEEEKKKKEKEKEEEEKKKKECAEKLKQC 117
Query: 376 KLELQR 393
ELQ+
Sbjct: 118 -AELQQ 122
>01_01_0656 + 5013609-5014256
Length = 215
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 166 ATTAACDASMPKQNNRKKKGVYWWNKEIAEARKECLKCRRRYTR 297
A T A + P+ + K Y+ N +A+ R C CRR +TR
Sbjct: 23 ARTEAEGLACPRCESTNTKFCYYNNYNLAQPRHFCKACRRYWTR 66
>10_08_0961 +
21869612-21869773,21869869-21869956,21870047-21870277,
21870371-21870538,21870808-21871001,21871151-21871234,
21871315-21871434,21871621-21871714,21871813-21871973,
21873237-21873313,21873738-21873932,21874487-21874559,
21874635-21874721,21874906-21875043,21875181-21875383,
21875469-21875631,21875861-21875992
Length = 789
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +1
Query: 241 KEIAEARKECLKCRRRYTRNNKKLGKGK---DRENNEENEHKKQYKEAKLELQRRIWKAK 411
KE+ R + Y N KK+ + K +RE NE + +++Y+E K E+ + +
Sbjct: 658 KELKWLRSATGSAEKEYEINQKKIAELKMELERERNERIKLEEEYEEVKNEVSELTSETE 717
Query: 412 DDKWREVCEEV 444
+ +++ +E+
Sbjct: 718 ETTIQKLQDEI 728
>08_01_0130 +
1040696-1041049,1042135-1042275,1042422-1042673,
1043797-1043904,1044289-1044593,1044720-1044841,
1044979-1045225,1045308-1045365,1045414-1045530,
1045718-1045753,1046492-1046554,1046958-1047047,
1047241-1047399,1047475-1047596,1048145-1048217,
1048307-1048375
Length = 771
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 415 DKWREVCEEVDNDIWGLGYKIVSKKLRGNSPINMGMAQIQSIADGLFPEHIDF 573
DK+ VC N++ L I RG +P+ + +IQ+ ++ L P H D+
Sbjct: 426 DKFLSVCRVFKNEVMQLNAPI-----RGIAPLRAAIRKIQTSSEELTPIHADY 473
>04_04_0596 -
26497863-26497913,26498010-26498081,26499015-26499093,
26499440-26499553,26499822-26499871,26500353-26500398,
26501100-26501719
Length = 343
Score = 28.7 bits (61), Expect = 4.9
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +1
Query: 259 RKECLKCRRRYTRNNKKLGKGKDRENNEEN---EHKKQYKEAKLELQRRIWKAKDDKWRE 429
RKE + RR R +K+ K K++E E E KK+ KE K L ++ A + W +
Sbjct: 140 RKEREEEERRRRRKDKERRKRKEKERERERKKKEKKKRRKEEKKNLGKK--AAVTNSWGK 197
Query: 430 --VCEEVD 447
+ EVD
Sbjct: 198 YGIIREVD 205
>03_05_0694 +
26844075-26844217,26844417-26844489,26844577-26844781,
26845516-26845655,26846858-26846983,26847455-26847622,
26848486-26848650,26849433-26849594,26849682-26849761,
26849975-26850038
Length = 441
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 256 ARKECLKCRRRYTRNNKKLGKGKDRENNEENEHKKQYKEAKLELQ-RRIWKAKD 414
AR +C K + + +NKK E +++H +Q K+A+L+LQ + K KD
Sbjct: 277 ARSKCSKPKDKQDDHNKKAQFKLRGEKAIKDKHDEQDKKAQLKLQGEKAVKRKD 330
>05_06_0126 -
25834129-25834214,25834595-25834658,25836201-25836521,
25836912-25837040,25837118-25837177,25837251-25837548,
25837622-25837776,25837959-25838097,25838185-25838266,
25838337-25838455,25838537-25838664,25838810-25838983,
25839052-25839203,25839393-25839425,25840362-25841331,
25841412-25841537
Length = 1011
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +1
Query: 304 KKLGKGKDRENNEENEHKKQYKE-AKLELQRRIWKAKDDK--WREVCEEVDNDI 456
K+ K + ++ E+N H+K KE + + +R K D K W E++ DI
Sbjct: 821 KEEPKNESSDDYEKNNHRKTKKERSNMRSTKRSKKVTDPKRIWESCWEDLSEDI 874
>04_04_1349 - 32811733-32813040
Length = 435
Score = 27.9 bits (59), Expect = 8.5
Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 1/97 (1%)
Frame = +1
Query: 289 YTRNNKKLGKGKDRENNEENEHKKQYKEAKLELQRRIWKAKDDKWREVCEEVDNDIWGLG 468
Y + K G K+ N + H + R W+ D+ W+ C+E L
Sbjct: 320 YNDMDAKNGMSKESIFNNVHSHGMRLVRNAFGHVRSRWRLLDECWKGECQE------ALP 373
Query: 469 YKIVSKKLRGNSPINMGMAQIQSIADGLFPE-HIDFE 576
Y +V+ L N I G + I +G E DFE
Sbjct: 374 YVVVAGCLLHNFLIKCGEPDPEEIQEGAAAELFSDFE 410
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.132 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,081,051
Number of Sequences: 37544
Number of extensions: 484254
Number of successful extensions: 1588
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1581
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -