Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6045
(718 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 27 0.18
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 27 0.18
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 26 0.41
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 25 0.94
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 25 0.94
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.2
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.2
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.2
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 24 1.2
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.2
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.2
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.2
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.2
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 23 2.9
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 5.0
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 5.0
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 5.0
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 5.0
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 5.0
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 5.0
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 5.0
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 6.7
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 6.7
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 21 8.8
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 21 8.8
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 21 8.8
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 8.8
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 27.1 bits (57), Expect = 0.18
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 400 IFVFVAPVSLPYTAFCVHFLRYFPCLSLFLAF 305
++VF S + FC+ FL +F C+++ AF
Sbjct: 439 MYVFQLLDSYAVSGFCLLFLMFFECIAISWAF 470
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 27.1 bits (57), Expect = 0.18
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 400 IFVFVAPVSLPYTAFCVHFLRYFPCLSLFLAF 305
++VF S + FC+ FL +F C+++ AF
Sbjct: 492 MYVFQLLDSYAVSGFCLLFLMFFECIAISWAF 523
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 25.8 bits (54), Expect = 0.41
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 403 KAKDDKWREVCEEVDNDIWGLGYKIVSKKLRGNSP 507
K D + +EVDN ++G+ V+ L NSP
Sbjct: 235 KMSDQQENLTLKEVDNKVYGMALSPVTHNLYYNSP 269
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 24.6 bits (51), Expect = 0.94
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -1
Query: 568 LCVPGRGHQLCFEFVPCPYLSVSFRV 491
L VPG+ +++ + P PY+ ++F V
Sbjct: 200 LGVPGKRNEIYYNCCPEPYIDITFVV 225
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 24.6 bits (51), Expect = 0.94
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -1
Query: 520 CPYLSVSFRVAFLTLFCIPVPIYHCRL 440
CPY S + LTL +P Y C L
Sbjct: 635 CPYPSYYSYIGVLTLVATSMPTYICYL 661
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.2
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 20/105 (19%)
Frame = -1
Query: 562 VPGRGHQLCFEFVPCPYLSVSFRVAF--LTLF--------CI---PVPIYHCRLP----- 437
+PG+ + + ++ P PY+ V+F + TL+ C+ + + LP
Sbjct: 165 MPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGE 224
Query: 436 -RTLPSIYRLSLSIFVFVAPVSLPYTAFCVHFL-RYFPCLSLFLA 308
TL LSL++F+ + S+P T+ V + YF C+ +A
Sbjct: 225 KLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGSYFNCIMFMVA 269
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.2
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 20/105 (19%)
Frame = -1
Query: 562 VPGRGHQLCFEFVPCPYLSVSFRVAF--LTLF--------CI---PVPIYHCRLP----- 437
+PG+ + + ++ P PY+ V+F + TL+ C+ + + LP
Sbjct: 165 MPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGE 224
Query: 436 -RTLPSIYRLSLSIFVFVAPVSLPYTAFCVHFL-RYFPCLSLFLA 308
TL LSL++F+ + S+P T+ V + YF C+ +A
Sbjct: 225 KLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGSYFNCIMFMVA 269
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.2
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 20/105 (19%)
Frame = -1
Query: 562 VPGRGHQLCFEFVPCPYLSVSFRVAF--LTLF--------CI---PVPIYHCRLP----- 437
+PG+ + + ++ P PY+ V+F + TL+ C+ + + LP
Sbjct: 165 MPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGE 224
Query: 436 -RTLPSIYRLSLSIFVFVAPVSLPYTAFCVHFL-RYFPCLSLFLA 308
TL LSL++F+ + S+P T+ V + YF C+ +A
Sbjct: 225 KLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGSYFNCIMFMVA 269
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 24.2 bits (50), Expect = 1.2
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 20/105 (19%)
Frame = -1
Query: 562 VPGRGHQLCFEFVPCPYLSVSFRVAF--LTLF--------CI---PVPIYHCRLP----- 437
+PG+ + + ++ P PY+ V+F + TL+ C+ + + LP
Sbjct: 233 MPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGE 292
Query: 436 -RTLPSIYRLSLSIFVFVAPVSLPYTAFCVHFL-RYFPCLSLFLA 308
TL LSL++F+ + S+P T+ V + YF C+ +A
Sbjct: 293 KLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGSYFNCIMFMVA 337
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.2
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = -1
Query: 562 VPGRGHQLCFEFVPCPYLSVSFRV 491
+PG+ + + ++ P PY+ V+F +
Sbjct: 165 MPGKKNTITYQCCPEPYVDVTFTI 188
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.2
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = -1
Query: 562 VPGRGHQLCFEFVPCPYLSVSFRV 491
+PG+ + + ++ P PY+ V+F +
Sbjct: 165 MPGKKNTITYQCCPEPYVDVTFTI 188
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.2
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = -1
Query: 562 VPGRGHQLCFEFVPCPYLSVSFRV 491
+PG+ + + ++ P PY+ V+F +
Sbjct: 165 MPGKKNTITYQCCPEPYVDVTFTI 188
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.4 bits (48), Expect = 2.2
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = -1
Query: 562 VPGRGHQLCFEFVPCPYLSVSFRV 491
+PG+ + + ++ P PY+ V+F +
Sbjct: 233 MPGKKNTITYQCCPEPYVDVTFTI 256
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 23.0 bits (47), Expect = 2.9
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -3
Query: 623 PPRSPLGTPCDGFVFRS-KSMCSGK 552
PP SP P D F+FRS ++ +GK
Sbjct: 270 PPYSPDLAPSDYFLFRSLQNSLNGK 294
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 5.0
Identities = 6/26 (23%), Positives = 14/26 (53%)
Frame = -1
Query: 514 YLSVSFRVAFLTLFCIPVPIYHCRLP 437
Y + + + ++ +PVP+Y+ P
Sbjct: 99 YKQLCYNINYIEQIPVPVPVYYGNFP 124
Score = 21.4 bits (43), Expect = 8.8
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 280 RRRYTRNNKKLGKGKDRENNEENEHKKQYKEAKLELQRR 396
R+RY+R+ ++ K EN+ +++K KE + R
Sbjct: 36 RKRYSRSREREQKSYKNENS-YRKYRKTSKERSRDRTER 73
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 5.0
Identities = 6/26 (23%), Positives = 14/26 (53%)
Frame = -1
Query: 514 YLSVSFRVAFLTLFCIPVPIYHCRLP 437
Y + + + ++ +PVP+Y+ P
Sbjct: 99 YKQLCYNINYIEQIPVPVPVYYGNFP 124
Score = 21.4 bits (43), Expect = 8.8
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 280 RRRYTRNNKKLGKGKDRENNEENEHKKQYKEAKLELQRR 396
R+RY+R+ ++ K EN+ +++K KE + R
Sbjct: 36 RKRYSRSREREQKSYKNENS-YRKYRKTSKERSRDRTER 73
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 5.0
Identities = 6/26 (23%), Positives = 14/26 (53%)
Frame = -1
Query: 514 YLSVSFRVAFLTLFCIPVPIYHCRLP 437
Y + + + ++ +PVP+Y+ P
Sbjct: 99 YKQLCYNINYIEQIPVPVPVYYGNFP 124
Score = 21.4 bits (43), Expect = 8.8
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 280 RRRYTRNNKKLGKGKDRENNEENEHKKQYKEAKLELQRR 396
R+RY+R+ ++ K EN+ +++K KE + R
Sbjct: 36 RKRYSRSREREQKSYKNENS-YRKYRKTSKERSRDRTER 73
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 5.0
Identities = 6/26 (23%), Positives = 14/26 (53%)
Frame = -1
Query: 514 YLSVSFRVAFLTLFCIPVPIYHCRLP 437
Y + + + ++ +PVP+Y+ P
Sbjct: 99 YKQLCYNINYIEQIPVPVPVYYGNFP 124
Score = 21.4 bits (43), Expect = 8.8
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 280 RRRYTRNNKKLGKGKDRENNEENEHKKQYKEAKLELQRR 396
R+RY+R+ ++ K EN+ +++K KE + R
Sbjct: 36 RKRYSRSREREQKSYKNENS-YRKYRKTSKERSRDRTER 73
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 5.0
Identities = 6/26 (23%), Positives = 14/26 (53%)
Frame = -1
Query: 514 YLSVSFRVAFLTLFCIPVPIYHCRLP 437
Y + + + ++ +PVP+Y+ P
Sbjct: 99 YKQLCYNINYIEQIPVPVPVYYGNFP 124
Score = 21.4 bits (43), Expect = 8.8
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 280 RRRYTRNNKKLGKGKDRENNEENEHKKQYKEAKLELQRR 396
R+RY+R+ ++ K EN+ +++K KE + R
Sbjct: 36 RKRYSRSREREQKSYKNENS-YRKYRKTSKERSRDRTER 73
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.0
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +1
Query: 202 QNNRKKKGVYWWNKEIAEARKECLKCRRRY---TRNNKKLGKGKDRENNEENEHKKQY 366
+N RK + +KE + R E + R + +NK + + NN N +KK Y
Sbjct: 51 KNERKYRKYRERSKERSRDRTERERSREPKIISSLSNKTIHNNNNYNNNNYNNYKKLY 108
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 5.0
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +1
Query: 283 RRYTRNNKKLGKGKDRENNEENEHKKQYKEAKLELQRRIWKAKDDKWREVCEE 441
R+ R +KL K++ E HK+ + + E + + + K+RE +E
Sbjct: 246 RKKDRQYEKLHNEKEKFLEERTSHKRYSRSREREQKSYKNEREYRKYRETSKE 298
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 298 NNKKLGKGKDRENNEENEHKKQYKEAKLELQR 393
NN + NN N +KK YK + +++
Sbjct: 95 NNYNNNYNNNYNNNYNNNYKKLYKNYIINIEQ 126
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 298 NNKKLGKGKDRENNEENEHKKQYKEAKLELQR 393
NN + NN N +KK YK + +++
Sbjct: 95 NNYNNNYNNNYNNNYNNNYKKLYKNYIINIEQ 126
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 8.8
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 280 RRRYTRNNKKLGKGKDRENNEENEHKKQYKEAKLELQRR 396
R+RY+R+ ++ K EN+ +++K KE + R
Sbjct: 36 RKRYSRSREREQKSYKNENS-YRKYRKTSKERSRDRTER 73
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.4 bits (43), Expect = 8.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3
Query: 68 AWHWDRGNT 42
A HW RGNT
Sbjct: 20 AQHWSRGNT 28
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.4 bits (43), Expect = 8.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3
Query: 68 AWHWDRGNT 42
A HW RGNT
Sbjct: 20 AQHWSRGNT 28
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.4 bits (43), Expect = 8.8
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +1
Query: 274 KCRRRYTRNNKKLGKGKDRENNEENEHKKQYKEAKLELQ 390
+ R+R + + D E NEE E + EA+ L+
Sbjct: 265 RLRKRRQNDGEGADDRDDDEENEEEEDGRGQSEAEKRLK 303
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.317 0.132 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,000
Number of Sequences: 438
Number of extensions: 5088
Number of successful extensions: 44
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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