Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6043
         (656 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical ...    29   3.8  
AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical ...    29   3.8  

>Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical
           protein F14F4.3b protein.
          Length = 1427

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +2

Query: 122 TSPSKSNPSQILPPDRDPLRESSEKLSG 205
           TSP    P+Q  P D + LR SSE L G
Sbjct: 718 TSPCGDGPAQPAPLDAEILRNSSEDLKG 745


>Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical
           protein F14F4.3a protein.
          Length = 1400

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +2

Query: 122 TSPSKSNPSQILPPDRDPLRESSEKLSG 205
           TSP    P+Q  P D + LR SSE L G
Sbjct: 691 TSPCGDGPAQPAPLDAEILRNSSEDLKG 718


>AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical
           protein F14F4.3b protein.
          Length = 1427

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +2

Query: 122 TSPSKSNPSQILPPDRDPLRESSEKLSG 205
           TSP    P+Q  P D + LR SSE L G
Sbjct: 718 TSPCGDGPAQPAPLDAEILRNSSEDLKG 745


>AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical
           protein F14F4.3a protein.
          Length = 1400

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +2

Query: 122 TSPSKSNPSQILPPDRDPLRESSEKLSG 205
           TSP    P+Q  P D + LR SSE L G
Sbjct: 691 TSPCGDGPAQPAPLDAEILRNSSEDLKG 718


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,809,241
Number of Sequences: 27780
Number of extensions: 310142
Number of successful extensions: 661
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)