Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6035
         (760 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    27   0.83 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   4.4  

>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
            protein.
          Length = 1077

 Score = 26.6 bits (56), Expect = 0.83
 Identities = 18/65 (27%), Positives = 28/65 (43%)
 Frame = -1

Query: 256  SHGQLYVACSRVGKPSSLFVLAKDGLTKNIVHAAALKD*YYVMN*LYIGIIITFNKLKQL 77
            SHG+L    +RV  PS  F  A D L         + D + +++     +I        L
Sbjct: 969  SHGELLHRMNRVPSPSCSFCSAIDTLEHKFAGCRRVADAWQILHQRISVVISGCPSSSTL 1028

Query: 76   MFGVL 62
            +FG+L
Sbjct: 1029 LFGLL 1033


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 759 RVACRKSNVSCKKCGRWPF*I*RYNSYCQ 673
           +  CRK +  CKKC  + F    +  +CQ
Sbjct: 633 KAVCRKCHPRCKKCTGYGF----HEQFCQ 657


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 815,029
Number of Sequences: 2352
Number of extensions: 17462
Number of successful extensions: 17
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)