Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6035
(760 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical ... 100 1e-21
AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ... 100 1e-21
AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ... 100 1e-21
AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical ... 100 1e-21
AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical ... 99 3e-21
Z81499-1|CAB04087.1| 471|Caenorhabditis elegans Hypothetical pr... 52 6e-07
U53180-5|AAA96287.3| 295|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z50044-5|CAA90357.2| 332|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z82286-6|CAB05304.1| 376|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z70683-2|CAA94592.2| 717|Caenorhabditis elegans Hypothetical pr... 28 6.3
AF240777-1|AAF63745.1| 376|Caenorhabditis elegans delta 12 fatt... 28 6.3
U55363-2|AAA97961.3| 357|Caenorhabditis elegans Serpentine rece... 28 8.3
L23649-1|AAA27912.1| 568|Caenorhabditis elegans Hypothetical pr... 28 8.3
AL132948-17|CAC51056.1| 396|Caenorhabditis elegans Hypothetical... 28 8.3
AJ009861-1|CAA08899.1| 395|Caenorhabditis elegans aspartic prot... 28 8.3
AF210248-1|AAF19445.1| 396|Caenorhabditis elegans aspartic prot... 28 8.3
AF208526-1|AAF19442.1| 396|Caenorhabditis elegans aspartic prot... 28 8.3
AF016419-8|AAG24053.1| 293|Caenorhabditis elegans Serpentine re... 28 8.3
>AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical
protein F33H12.6 protein.
Length = 1360
Score = 100 bits (239), Expect = 1e-21
Identities = 63/187 (33%), Positives = 96/187 (51%), Gaps = 4/187 (2%)
Frame = -1
Query: 712 LAILNLKIQQLLPGDLVSYKSIDTVCDDTEA--VNFPTEFLNSLDLPGMPPHNLQLKV-E 542
+A LN + + G+ Y S D V + +A +++PTEFLN + +PPH L+LK
Sbjct: 1169 VAQLNDDVHNRMVGEERIYLSRDEVIVEHQADTMHYPTEFLNKMSPSSLPPHILKLKKGS 1228
Query: 541 XXXXXXXXXXXXXXXNGTRLVIKKIMKKVNEGTILNGKFRGENILIPRIPIIPT-DVPIQ 365
NG+R +++ + G+ +G +IPRI ++ Q
Sbjct: 1229 VIILLRNLDVSAGLCNGSRFIVETLASHSLGCRFATGERKGHFTIIPRIDCYDDKNISFQ 1288
Query: 364 FKRIPFPITLAFAMTINKSQGQTMSVCGLDLSTPCFSHGQLYVACSRVGKPSSLFVLAKD 185
+R FP+ L+FA++INK+QGQ+ S GL + T F+HGQLYVA SRV L V +
Sbjct: 1289 LRRTQFPVRLSFALSINKAQGQSFSKIGLWIPTDVFTHGQLYVALSRVRTKEGLIVKSSS 1348
Query: 184 GLTKNIV 164
+ NIV
Sbjct: 1349 NIVTNIV 1355
>AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical
protein ZK250.9 protein.
Length = 1466
Score = 100 bits (239), Expect = 1e-21
Identities = 63/187 (33%), Positives = 96/187 (51%), Gaps = 4/187 (2%)
Frame = -1
Query: 712 LAILNLKIQQLLPGDLVSYKSIDTVCDDTEA--VNFPTEFLNSLDLPGMPPHNLQLKV-E 542
+A LN + + G+ Y S D V + +A +++PTEFLN + +PPH L+LK
Sbjct: 1275 VAQLNDDVHNRMVGEERIYLSRDEVIVEHQADTMHYPTEFLNKMSPSSLPPHILKLKKGS 1334
Query: 541 XXXXXXXXXXXXXXXNGTRLVIKKIMKKVNEGTILNGKFRGENILIPRIPIIPT-DVPIQ 365
NG+R +++ + G+ +G +IPRI ++ Q
Sbjct: 1335 VIILLRNLDVSAGLCNGSRFIVETLASHSLGCRFATGERKGHFTIIPRIDCYDDKNISFQ 1394
Query: 364 FKRIPFPITLAFAMTINKSQGQTMSVCGLDLSTPCFSHGQLYVACSRVGKPSSLFVLAKD 185
+R FP+ L+FA++INK+QGQ+ S GL + T F+HGQLYVA SRV L V +
Sbjct: 1395 LRRTQFPVRLSFALSINKAQGQSFSKIGLWIPTDVFTHGQLYVALSRVRTKEGLIVKSSS 1454
Query: 184 GLTKNIV 164
+ NIV
Sbjct: 1455 NIVTNIV 1461
>AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical
protein Y16E11A.2 protein.
Length = 1466
Score = 100 bits (239), Expect = 1e-21
Identities = 63/187 (33%), Positives = 96/187 (51%), Gaps = 4/187 (2%)
Frame = -1
Query: 712 LAILNLKIQQLLPGDLVSYKSIDTVCDDTEA--VNFPTEFLNSLDLPGMPPHNLQLKV-E 542
+A LN + + G+ Y S D V + +A +++PTEFLN + +PPH L+LK
Sbjct: 1275 VAQLNDDVHNRMVGEERIYLSRDEVIVEHQADTMHYPTEFLNKMSPSSLPPHILKLKKGS 1334
Query: 541 XXXXXXXXXXXXXXXNGTRLVIKKIMKKVNEGTILNGKFRGENILIPRIPIIPT-DVPIQ 365
NG+R +++ + G+ +G +IPRI ++ Q
Sbjct: 1335 VIILLRNLDVSAGLCNGSRFIVETLASHSLGCRFATGERKGHFTIIPRIDCYDDKNISFQ 1394
Query: 364 FKRIPFPITLAFAMTINKSQGQTMSVCGLDLSTPCFSHGQLYVACSRVGKPSSLFVLAKD 185
+R FP+ L+FA++INK+QGQ+ S GL + T F+HGQLYVA SRV L V +
Sbjct: 1395 LRRTQFPVRLSFALSINKAQGQSFSKIGLWIPTDVFTHGQLYVALSRVRTKEGLIVKSSS 1454
Query: 184 GLTKNIV 164
+ NIV
Sbjct: 1455 NIVTNIV 1461
>AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical
protein F59H6.5 protein.
Length = 1486
Score = 100 bits (239), Expect = 1e-21
Identities = 63/187 (33%), Positives = 96/187 (51%), Gaps = 4/187 (2%)
Frame = -1
Query: 712 LAILNLKIQQLLPGDLVSYKSIDTVCDDTEA--VNFPTEFLNSLDLPGMPPHNLQLKV-E 542
+A LN + + G+ Y S D V + +A +++PTEFLN + +PPH L+LK
Sbjct: 1295 VAQLNDDVHNRMVGEERIYLSRDEVIVEHQADTMHYPTEFLNKMSPSSLPPHILKLKKGS 1354
Query: 541 XXXXXXXXXXXXXXXNGTRLVIKKIMKKVNEGTILNGKFRGENILIPRIPIIPT-DVPIQ 365
NG+R +++ + G+ +G +IPRI ++ Q
Sbjct: 1355 VIILLRNLDVSAGLCNGSRFIVETLASHSLGCRFATGERKGHFTIIPRIDCYDDKNISFQ 1414
Query: 364 FKRIPFPITLAFAMTINKSQGQTMSVCGLDLSTPCFSHGQLYVACSRVGKPSSLFVLAKD 185
+R FP+ L+FA++INK+QGQ+ S GL + T F+HGQLYVA SRV L V +
Sbjct: 1415 LRRTQFPVRLSFALSINKAQGQSFSKIGLWIPTDVFTHGQLYVALSRVRTKEGLIVKSSS 1474
Query: 184 GLTKNIV 164
+ NIV
Sbjct: 1475 NIVTNIV 1481
>AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical
protein Y46B2A.2 protein.
Length = 1365
Score = 99.1 bits (236), Expect = 3e-21
Identities = 63/187 (33%), Positives = 95/187 (50%), Gaps = 4/187 (2%)
Frame = -1
Query: 712 LAILNLKIQQLLPGDLVSYKSIDTVCDDTEA--VNFPTEFLNSLDLPGMPPHNLQLKV-E 542
+A LN + + G+ Y S D V + +A +++PTEFLN + +PPH L+LK
Sbjct: 1174 VAQLNDDVHNRMVGEERIYLSRDEVIVEHQADTMHYPTEFLNKMSPSSLPPHILKLKKGS 1233
Query: 541 XXXXXXXXXXXXXXXNGTRLVIKKIMKKVNEGTILNGKFRGENILIPRIPIIPT-DVPIQ 365
NG+R +++ + G+ +G +IPRI ++ Q
Sbjct: 1234 VIILLRNLDVSAGLCNGSRFIVETLASHSLGCRFATGERKGHFTIIPRIDCYDDKNISFQ 1293
Query: 364 FKRIPFPITLAFAMTINKSQGQTMSVCGLDLSTPCFSHGQLYVACSRVGKPSSLFVLAKD 185
+R FP+ L+FA++INK+QGQ+ S GL + T F+HGQLYVA SRV L V
Sbjct: 1294 LRRTQFPVRLSFALSINKAQGQSFSKIGLWIPTDVFTHGQLYVALSRVRTKEGLIVKFSS 1353
Query: 184 GLTKNIV 164
+ NIV
Sbjct: 1354 NIVTNIV 1360
>Z81499-1|CAB04087.1| 471|Caenorhabditis elegans Hypothetical
protein F11C3.1 protein.
Length = 471
Score = 51.6 bits (118), Expect = 6e-07
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = -1
Query: 355 IPFPITLAFAMTINKSQGQTMSVCGLDLSTPCFSHGQLYVACSRVGKPSSLFVLAKDGLT 176
+ FP++L FA TI+ SQG++ GL CF HG +Y A SRV + V +D +
Sbjct: 403 LQFPVSLNFASTIHGSQGKSFEKLGLYKLNECFEHGMIYTAISRVRRFEDYKVFTEDTVI 462
Query: 175 KNIVHAAAL 149
+N + + L
Sbjct: 463 ENKIEQSLL 471
>U53180-5|AAA96287.3| 295|Caenorhabditis elegans Hypothetical
protein D1014.3 protein.
Length = 295
Score = 31.5 bits (68), Expect = 0.67
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 582 KSSEFKNSVGKFTASVSSQTVSIDLYDTKSPGNNCCIFRFKMA 710
K+SE +G+FT + + +LY+T+ P C+ ++ A
Sbjct: 105 KTSEIYTDMGRFTMAAKNHVSIAELYETELPDKEQCVKHYQQA 147
>Z50044-5|CAA90357.2| 332|Caenorhabditis elegans Hypothetical
protein F22B5.5 protein.
Length = 332
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 588 SEFKNSVGKFTASVSSQTVSIDLYDTKSPGN 680
++FKN VG+ + S + + I L T+S GN
Sbjct: 212 AKFKNGVGRVAYNKSGEVIGIGLVSTESSGN 242
>Z82286-6|CAB05304.1| 376|Caenorhabditis elegans Hypothetical
protein W02A2.1 protein.
Length = 376
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 759 RVACRKSNVSCKKCGRWPF*I*RYNSYCQGTWYHINLLIQ 640
RV C S V+C C F + Y+ Y +Y+I LL Q
Sbjct: 202 RVKCAVSGVACAICAYIAFVLCDYSVYTFVKYYYIPLLFQ 241
>Z70683-2|CAA94592.2| 717|Caenorhabditis elegans Hypothetical
protein F13B12.3 protein.
Length = 717
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = +3
Query: 246 CPCEKHGVLKSKPQ-TDIVWPW 308
C G LKS P TD+VWPW
Sbjct: 463 CHISLAGHLKSTPNITDVVWPW 484
>AF240777-1|AAF63745.1| 376|Caenorhabditis elegans delta 12 fatty
acid desaturaseFAT-2 protein.
Length = 376
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 759 RVACRKSNVSCKKCGRWPF*I*RYNSYCQGTWYHINLLIQ 640
RV C S V+C C F + Y+ Y +Y+I LL Q
Sbjct: 202 RVKCAVSGVACAICAYIAFVLCDYSVYTFVKYYYIPLLFQ 241
>U55363-2|AAA97961.3| 357|Caenorhabditis elegans Serpentine
receptor, class h protein28 protein.
Length = 357
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 550 SIVSYVVACLANPVSSKTLLENLQLQCHRKLYQ*IYMIPSPL--AITVVSSDLKWPTSTF 723
S+ Y++AC+ PV + +L ++ + R + Q M L I+++ S L +P STF
Sbjct: 218 SLFLYIIACIFIPVVAFQILNRMKHRLSRHVVQAQKMSIKALLFQISIIVSFLLFPFSTF 277
>L23649-1|AAA27912.1| 568|Caenorhabditis elegans Hypothetical
protein C02C2.4 protein.
Length = 568
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 667 SPLAITVVSSDLKWPTSTFFAANIA 741
SP+ V +SDL WP + +FA A
Sbjct: 245 SPMVAAVCASDLGWPATFYFAGIFA 269
>AL132948-17|CAC51056.1| 396|Caenorhabditis elegans Hypothetical
protein Y39B6A.20 protein.
Length = 396
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 700 NLKIQQLLPGDLVSYKSIDTV 638
NL+I Q PG L++Y +IDTV
Sbjct: 218 NLQIAQGTPGGLITYGAIDTV 238
>AJ009861-1|CAA08899.1| 395|Caenorhabditis elegans aspartic
protease protein.
Length = 395
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 700 NLKIQQLLPGDLVSYKSIDTV 638
NL+I Q PG L++Y +IDTV
Sbjct: 217 NLQIAQGTPGGLITYGAIDTV 237
>AF210248-1|AAF19445.1| 396|Caenorhabditis elegans aspartic
protease 1 protein.
Length = 396
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 700 NLKIQQLLPGDLVSYKSIDTV 638
NL+I Q PG L++Y +IDTV
Sbjct: 218 NLQIAQGTPGGLITYGAIDTV 238
>AF208526-1|AAF19442.1| 396|Caenorhabditis elegans aspartic
protease 1 protein.
Length = 396
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 700 NLKIQQLLPGDLVSYKSIDTV 638
NL+I Q PG L++Y +IDTV
Sbjct: 218 NLQIAQGTPGGLITYGAIDTV 238
>AF016419-8|AAG24053.1| 293|Caenorhabditis elegans Serpentine
receptor, class x protein6 protein.
Length = 293
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -1
Query: 412 ILIPRIP-IIPTDVPIQFKRIPFPITL 335
IL +P I+P D PI F +PF +TL
Sbjct: 222 ILFQILPYIVPADQPIWFSSVPFLVTL 248
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,510,394
Number of Sequences: 27780
Number of extensions: 378508
Number of successful extensions: 976
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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