Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6035
(760 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 26 0.33
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 26 0.33
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 25 1.0
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 25 1.0
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 3.1
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 3.1
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 4.1
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 23 4.1
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 23 4.1
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 22 5.4
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 9.5
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 26.2 bits (55), Expect = 0.33
Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 566 WWH-AWQIQ*VQKLCWKIYSFSVIANCINRFI*YQVPW 676
WW W I +C +++F++I +++ Y+ PW
Sbjct: 490 WWKICWTIT-TPAICVGVFTFNIIKFVPVKYLTYEYPW 526
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 26.2 bits (55), Expect = 0.33
Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 566 WWH-AWQIQ*VQKLCWKIYSFSVIANCINRFI*YQVPW 676
WW W I +C +++F++I +++ Y+ PW
Sbjct: 543 WWKICWTIT-TPAICVGVFTFNIIKFVPVKYLTYEYPW 579
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 24.6 bits (51), Expect = 1.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 326 CKCQCNRKWNTLK 364
CKC C R+ NTL+
Sbjct: 78 CKCFCKRRTNTLR 90
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 24.6 bits (51), Expect = 1.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 326 CKCQCNRKWNTLK 364
CKC C R+ NTL+
Sbjct: 526 CKCFCKRRTNTLR 538
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = -2
Query: 690 YNSYCQGTWYHINLLIQFAMTLKL*IFQQSF 598
YN+ C+ +Y+IN + Q + + + I+ +F
Sbjct: 105 YNNNCKKLYYNINYIEQIPVPVPVPIYCGNF 135
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 23.0 bits (47), Expect = 3.1
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -2
Query: 666 WYHINLLIQFAMTLK 622
W H++ L++FA+ LK
Sbjct: 864 WGHLSTLVEFALELK 878
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.6 bits (46), Expect = 4.1
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2
Query: 326 CKCQCNRKWNT 358
CKC +R WNT
Sbjct: 765 CKCYNDRTWNT 775
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -1
Query: 688 QQLLPGDLVSYKSIDTVCDDTEAVNFPTEFLNS 590
+ +LPG + +DT DT A+N F+ +
Sbjct: 9 EDILPGITIGVHILDTCGRDTYALNQSLHFVRA 41
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -1
Query: 688 QQLLPGDLVSYKSIDTVCDDTEAVNFPTEFLNS 590
+ +LPG + +DT DT A+N F+ +
Sbjct: 99 EDILPGITIGVHILDTCGRDTYALNQSLHFVRA 131
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 22.2 bits (45), Expect = 5.4
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 76 MFGVLLFLNNIPSSFTAL*AFSLI 5
+FGVLL L N +S L + LI
Sbjct: 12 LFGVLLLLTNADNSVHILSKYQLI 35
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/31 (25%), Positives = 19/31 (61%)
Frame = -2
Query: 690 YNSYCQGTWYHINLLIQFAMTLKL*IFQQSF 598
YN+Y + +Y+IN + Q + + + ++ +F
Sbjct: 101 YNNYNKKLYYNINYIEQIPVPVPVPVYCGNF 131
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,093
Number of Sequences: 438
Number of extensions: 4900
Number of successful extensions: 20
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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