Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6032
(535 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 120 1e-29
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 118 3e-29
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 118 3e-29
DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein ... 108 3e-26
AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein ... 108 3e-26
DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 97 8e-23
AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 97 8e-23
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 83 2e-18
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 83 2e-18
DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein ... 48 8e-08
AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein ... 48 8e-08
DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein ... 42 3e-06
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 23 2.6
S76959-1|AAB33934.1| 85|Apis mellifera olfactory receptor prot... 21 6.0
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 21 6.0
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 21 6.0
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 6.0
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 21 7.9
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 7.9
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 7.9
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 21 7.9
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 120 bits (288), Expect = 1e-29
Identities = 46/107 (42%), Positives = 75/107 (70%)
Frame = +1
Query: 91 RPDDKYTDRYDNVNLDEVLSNSRLLQPYIKCILDKDRCAPDAKELKEHIREALETECAKC 270
RPD+ YT ++DN+N+DE+L + RLL Y KC++D+ RC + ELK + +AL T+C KC
Sbjct: 20 RPDESYTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCTAEGNELKRVLPDALATDCKKC 79
Query: 271 TEAQKKGTRRVIGHLINNESKSWNELTAKYDPENKFTAKYEKELREI 411
T+ Q++ ++VI L+ N+ + W+ L KYDP+ KF K+E+E +++
Sbjct: 80 TDKQREVIKKVIKFLVENKPELWDSLANKYDPDKKFRVKFEEEAKKL 126
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 118 bits (285), Expect = 3e-29
Identities = 45/107 (42%), Positives = 75/107 (70%)
Frame = +1
Query: 91 RPDDKYTDRYDNVNLDEVLSNSRLLQPYIKCILDKDRCAPDAKELKEHIREALETECAKC 270
RPD+ YT ++DN+N+DE+L + RLL Y KC++D+ RC + ELK + +AL T+C KC
Sbjct: 20 RPDESYTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCTAEGNELKRVLPDALATDCKKC 79
Query: 271 TEAQKKGTRRVIGHLINNESKSWNELTAKYDPENKFTAKYEKELREI 411
T+ Q++ ++VI L+ N+ + W+ L KYDP+ K+ K+E+E +++
Sbjct: 80 TDKQREVIKKVIKFLVENKPELWDSLANKYDPDKKYRVKFEEEAKKL 126
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 118 bits (285), Expect = 3e-29
Identities = 45/107 (42%), Positives = 75/107 (70%)
Frame = +1
Query: 91 RPDDKYTDRYDNVNLDEVLSNSRLLQPYIKCILDKDRCAPDAKELKEHIREALETECAKC 270
RPD+ YT ++DN+N+DE+L + RLL Y KC++D+ RC + ELK + +AL T+C KC
Sbjct: 20 RPDESYTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCTAEGNELKRVLPDALATDCKKC 79
Query: 271 TEAQKKGTRRVIGHLINNESKSWNELTAKYDPENKFTAKYEKELREI 411
T+ Q++ ++VI L+ N+ + W+ L KYDP+ K+ K+E+E +++
Sbjct: 80 TDKQREVIKKVIKFLVENKPELWDSLANKYDPDKKYRVKFEEEAKKL 126
>DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein 4
protein.
Length = 128
Score = 108 bits (260), Expect = 3e-26
Identities = 47/98 (47%), Positives = 66/98 (67%)
Frame = +1
Query: 97 DDKYTDRYDNVNLDEVLSNSRLLQPYIKCILDKDRCAPDAKELKEHIREALETECAKCTE 276
+DKYT +YDNV++D VL+ RLL Y+ C+LD+ C PDA ELK ++ +ALE EC+ C+E
Sbjct: 21 EDKYTTKYDNVDIDVVLNTERLLNAYVNCLLDQGPCTPDAAELKRNLPDALENECSPCSE 80
Query: 277 AQKKGTRRVIGHLINNESKSWNELTAKYDPENKFTAKY 390
QKK +V+ LI+N+ + W L AKYDP + Y
Sbjct: 81 KQKKIADKVVQFLIDNKPEIWVLLEAKYDPTGAYKQHY 118
>AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein
protein.
Length = 128
Score = 108 bits (260), Expect = 3e-26
Identities = 47/98 (47%), Positives = 66/98 (67%)
Frame = +1
Query: 97 DDKYTDRYDNVNLDEVLSNSRLLQPYIKCILDKDRCAPDAKELKEHIREALETECAKCTE 276
+DKYT +YDNV++D VL+ RLL Y+ C+LD+ C PDA ELK ++ +ALE EC+ C+E
Sbjct: 21 EDKYTTKYDNVDIDVVLNTERLLNAYVNCLLDQGPCTPDAAELKRNLPDALENECSPCSE 80
Query: 277 AQKKGTRRVIGHLINNESKSWNELTAKYDPENKFTAKY 390
QKK +V+ LI+N+ + W L AKYDP + Y
Sbjct: 81 KQKKIADKVVQFLIDNKPEIWVLLEAKYDPTGAYKQHY 118
>DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6
protein.
Length = 125
Score = 97.5 bits (232), Expect = 8e-23
Identities = 41/105 (39%), Positives = 64/105 (60%)
Frame = +1
Query: 100 DKYTDRYDNVNLDEVLSNSRLLQPYIKCILDKDRCAPDAKELKEHIREALETECAKCTEA 279
+ YT +YD++++D +L N R+L YIKC+LD+ C + +ELK+ + +AL T C KC E
Sbjct: 19 EDYTTKYDDMDIDRILQNGRILTNYIKCMLDEGPCTNEGRELKKILPDALSTGCNKCNEK 78
Query: 280 QKKGTRRVIGHLINNESKSWNELTAKYDPENKFTAKYEKELREIK 414
QK +V+ +L K W L+AKYD ++ +YE L+ K
Sbjct: 79 QKHTANKVVNYLKTKRPKDWERLSAKYDSTGEYKKRYEHGLQFAK 123
>AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein
protein.
Length = 125
Score = 97.5 bits (232), Expect = 8e-23
Identities = 41/105 (39%), Positives = 64/105 (60%)
Frame = +1
Query: 100 DKYTDRYDNVNLDEVLSNSRLLQPYIKCILDKDRCAPDAKELKEHIREALETECAKCTEA 279
+ YT +YD++++D +L N R+L YIKC+LD+ C + +ELK+ + +AL T C KC E
Sbjct: 19 EDYTTKYDDMDIDRILQNGRILTNYIKCMLDEGPCTNEGRELKKILPDALSTGCNKCNEK 78
Query: 280 QKKGTRRVIGHLINNESKSWNELTAKYDPENKFTAKYEKELREIK 414
QK +V+ +L K W L+AKYD ++ +YE L+ K
Sbjct: 79 QKHTANKVVNYLKTKRPKDWERLSAKYDSTGEYKKRYEHGLQFAK 123
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 83.0 bits (196), Expect = 2e-18
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +1
Query: 97 DDKYTDRYDNVNLDEVLSNSRLLQPYIKCILDKDRC-APDAKELKEHIREALETECAKCT 273
++ Y+D+YD VN+DE+L+N RL Y C +D C PD+ K HI EA +T+C KCT
Sbjct: 20 EELYSDKYDYVNIDEILANDRLRNQYYDCFIDAGSCLTPDSVFFKSHITEAFQTQCKKCT 79
Query: 274 EAQKKGTRRVIGHLINNESKSWN 342
E QK+ ++ NE + WN
Sbjct: 80 EIQKQNLDKLAEWFTTNEPEKWN 102
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 83.0 bits (196), Expect = 2e-18
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +1
Query: 97 DDKYTDRYDNVNLDEVLSNSRLLQPYIKCILDKDRC-APDAKELKEHIREALETECAKCT 273
++ Y+D+YD VN+DE+L+N RL Y C +D C PD+ K HI EA +T+C KCT
Sbjct: 20 EELYSDKYDYVNIDEILANDRLRNQYYDCFIDAGSCLTPDSVFFKSHITEAFQTQCKKCT 79
Query: 274 EAQKKGTRRVIGHLINNESKSWN 342
E QK+ ++ NE + WN
Sbjct: 80 EIQKQNLDKLAEWFTTNEPEKWN 102
>DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein 2
protein.
Length = 117
Score = 47.6 bits (108), Expect = 8e-08
Identities = 21/82 (25%), Positives = 40/82 (48%)
Frame = +1
Query: 115 RYDNVNLDEVLSNSRLLQPYIKCILDKDRCAPDAKELKEHIREALETECAKCTEAQKKGT 294
R + L+ LS+ R L+ +KC L + C P + LK L C +C+ + +
Sbjct: 32 RVSDEQLNMALSDQRYLRRQLKCALGEAPCDPVGRRLKSLAPLVLRGACPQCSPEETRQI 91
Query: 295 RRVIGHLINNESKSWNELTAKY 360
++V+ H+ K W+++ +Y
Sbjct: 92 KKVLSHIQRTYPKEWSKIVQQY 113
>AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein
protein.
Length = 117
Score = 47.6 bits (108), Expect = 8e-08
Identities = 21/82 (25%), Positives = 40/82 (48%)
Frame = +1
Query: 115 RYDNVNLDEVLSNSRLLQPYIKCILDKDRCAPDAKELKEHIREALETECAKCTEAQKKGT 294
R + L+ LS+ R L+ +KC L + C P + LK L C +C+ + +
Sbjct: 32 RVSDEQLNMALSDQRYLRRQLKCALGEAPCDPVGRRLKSLAPLVLRGACPQCSPEETRQI 91
Query: 295 RRVIGHLINNESKSWNELTAKY 360
++V+ H+ K W+++ +Y
Sbjct: 92 KKVLSHIQRTYPKEWSKIVQQY 113
>DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein 5
protein.
Length = 104
Score = 42.3 bits (95), Expect = 3e-06
Identities = 20/77 (25%), Positives = 35/77 (45%)
Frame = +1
Query: 130 NLDEVLSNSRLLQPYIKCILDKDRCAPDAKELKEHIREALETECAKCTEAQKKGTRRVIG 309
++ + L + +Q + CILD+ C K++KE + E L C +CT Q +I
Sbjct: 22 DISKFLKDRPYVQKQLHCILDRGHCDVIGKKIKELLPEVLNNHCNRCTSRQIGIANTLIP 81
Query: 310 HLINNESKSWNELTAKY 360
+ N W + +Y
Sbjct: 82 FMQQNYPYEWQLILRRY 98
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.6 bits (46), Expect = 2.6
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 207 GTPVLVEDTFDVRLKKS 157
G PV+ E+T D L+KS
Sbjct: 167 GKPVVAEETVDYMLEKS 183
>S76959-1|AAB33934.1| 85|Apis mellifera olfactory receptor
protein.
Length = 85
Score = 21.4 bits (43), Expect = 6.0
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -1
Query: 511 VVLIIYSLLIFEKYHIS 461
++LI Y+L++F H+S
Sbjct: 25 IILISYALILFNILHMS 41
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.4 bits (43), Expect = 6.0
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 288 LLLGFGTFRAFGLECLPDVFLQLLSVRGTPVLVEDTFDVRLKKSR 154
LLL R+ GL+CL +F + P+ D F V + +SR
Sbjct: 384 LLLRLPAIRSIGLKCLEYLFF-FKMIGDVPI---DDFLVEMLESR 424
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.4 bits (43), Expect = 6.0
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 288 LLLGFGTFRAFGLECLPDVFLQLLSVRGTPVLVEDTFDVRLKKSR 154
LLL R+ GL+CL +F + P+ D F V + +SR
Sbjct: 384 LLLRLPAIRSIGLKCLEYLFF-FKMIGDVPI---DDFLVEMLESR 424
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 6.0
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = -1
Query: 289 PSSGLRYISRIRSRVPP 239
P++ +RY ++++ +VPP
Sbjct: 694 PAAEVRYTAKLQVKVPP 710
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 21.0 bits (42), Expect = 7.9
Identities = 9/25 (36%), Positives = 10/25 (40%)
Frame = -3
Query: 359 YLAVSSFQDLLSLLIRWPITRRVPF 285
Y SF+D RW T PF
Sbjct: 440 YFVADSFEDAKEKFRRWVSTMSRPF 464
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.0 bits (42), Expect = 7.9
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 200 GVPLTLRS*RNTSGRHSRPNARNVP 274
G P R + GR S +ARN+P
Sbjct: 1828 GAPYDHYGSRGSVGRRSVGSARNIP 1852
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.0 bits (42), Expect = 7.9
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = +1
Query: 136 DEVLSNSRLLQPYIKCILDK 195
+EVL ++++Q I+ +LD+
Sbjct: 437 EEVLKEAKIIQEEIRTLLDE 456
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 21.0 bits (42), Expect = 7.9
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = +1
Query: 136 DEVLSNSRLLQPYIKCILDK 195
+EVL ++++Q I+ +LD+
Sbjct: 143 EEVLKEAKIIQEEIRTLLDE 162
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,765
Number of Sequences: 438
Number of extensions: 2670
Number of successful extensions: 27
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15090993
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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