Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6030
         (562 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical...    30   2.5  
AE014296-3452|AAS65079.1| 1067|Drosophila melanogaster CG33287-P...    29   5.7  
AE013599-2408|AAF57912.1|  889|Drosophila melanogaster CG9646-PA...    28   7.5  
AY071223-1|AAL48845.1|  157|Drosophila melanogaster RE26473p pro...    28   9.9  
AE014134-347|AAF51298.1|  157|Drosophila melanogaster CG15382-PA...    28   9.9  

>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
           protein protein.
          Length = 1830

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = -1

Query: 460 PHTLRYSSKVSV*SQRLPRPSNRNAS 383
           P++   SS  S  +Q+LPRPS+RNAS
Sbjct: 499 PNSENASSSTSPPTQQLPRPSSRNAS 524


>AE014296-3452|AAS65079.1| 1067|Drosophila melanogaster CG33287-PA
            protein.
          Length = 1067

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
 Frame = +1

Query: 43   FNEITFAYT--ETTFVKLSSTCMTLVS*CKLRIKD 141
            ++E+T   T  +TTFVK+S  C   V+  KLR +D
Sbjct: 984  YSEVTMRITPEKTTFVKISEMCSDDVNVVKLRYED 1018


>AE013599-2408|AAF57912.1|  889|Drosophila melanogaster CG9646-PA
           protein.
          Length = 889

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -3

Query: 173 PVHRSNAPDVLSFMRSLHYETSVMHVELSFTKVVSVYAK 57
           PVH  ++ D+L F+R  H ++S  H+   F   V V+ K
Sbjct: 66  PVHSIDSDDLLFFVRKKHVKSSSRHMP-KFETEVEVFRK 103


>AY071223-1|AAL48845.1|  157|Drosophila melanogaster RE26473p
           protein.
          Length = 157

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/48 (31%), Positives = 19/48 (39%)
 Frame = -2

Query: 444 IVLRSQYSHNGCPALQTETHHCFTAETGGAVAPTRADSQEVLPPVITQ 301
           ++LR QY    C  + T T  C           T    Q V PPV +Q
Sbjct: 42  LLLRYQYDRQVCNNIITYTESCSPTPPPAVADNTTPKDQTVRPPVASQ 89


>AE014134-347|AAF51298.1|  157|Drosophila melanogaster CG15382-PA
           protein.
          Length = 157

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/48 (31%), Positives = 19/48 (39%)
 Frame = -2

Query: 444 IVLRSQYSHNGCPALQTETHHCFTAETGGAVAPTRADSQEVLPPVITQ 301
           ++LR QY    C  + T T  C           T    Q V PPV +Q
Sbjct: 42  LLLRYQYDRQVCNNIITYTESCSPTPPPAVADNTTPKDQTVRPPVASQ 89


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,515,800
Number of Sequences: 53049
Number of extensions: 598451
Number of successful extensions: 1485
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1485
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)