Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6026
         (315 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122257-1|AAM52769.1| 1608|Drosophila melanogaster SD08305p pro...    29   1.3  
AJ401615-1|CAC14874.1|  494|Drosophila melanogaster zinc/iron re...    27   5.0  
AE014297-3874|AAF56527.1|  677|Drosophila melanogaster CG5959-PA...    27   6.7  
AY070921-1|AAL48543.1|  495|Drosophila melanogaster RE02747p pro...    26   8.8  
AE014297-2183|AAF55295.1|  495|Drosophila melanogaster CG6898-PA...    26   8.8  

>AY122257-1|AAM52769.1| 1608|Drosophila melanogaster SD08305p protein.
          Length = 1608

 Score = 29.1 bits (62), Expect = 1.3
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 71   RQDGYGPKI*HGPNVLKHDLQHDRNGSWWNHR 166
            R DG  P+  H P   ++ + HD +G+ W  R
Sbjct: 1429 RNDGRQPEPVHEPGAQRNHVHHDGSGAGWRRR 1460


>AJ401615-1|CAC14874.1|  494|Drosophila melanogaster zinc/iron
           regulated transporter-related protein 3, DZIP3 protein
           protein.
          Length = 494

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +2

Query: 110 NVLKHDLQHDRNGSWWNHRHNNRNEYDELH*GTTDDD 220
           N LK  LQ D   + W  RH+  +  D  H    DDD
Sbjct: 8   NFLKCFLQIDEPSNRWTSRHDGEDHDDNDHDHDHDDD 44


>AE014297-3874|AAF56527.1|  677|Drosophila melanogaster CG5959-PA
           protein.
          Length = 677

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 113 VLKHDLQHDRNGSWWNHRH 169
           V +H+ + DR+GS W H H
Sbjct: 218 VQRHEFKVDRSGSLWYHSH 236


>AY070921-1|AAL48543.1|  495|Drosophila melanogaster RE02747p
           protein.
          Length = 495

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
 Frame = +2

Query: 110 NVLKHDLQHDRNGSWWNHRHNNR----NEYDELH*GTTDDD 220
           N LK  LQ D   + W  RH+      N++D  H    DDD
Sbjct: 8   NFLKCFLQIDEPSNRWTSRHDGEDLDDNDHDHDHDDDNDDD 48


>AE014297-2183|AAF55295.1|  495|Drosophila melanogaster CG6898-PA
           protein.
          Length = 495

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
 Frame = +2

Query: 110 NVLKHDLQHDRNGSWWNHRHNNR----NEYDELH*GTTDDD 220
           N LK  LQ D   + W  RH+      N++D  H    DDD
Sbjct: 8   NFLKCFLQIDEPSNRWTSRHDGEDLDDNDHDHDHDDDNDDD 48


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,916,889
Number of Sequences: 53049
Number of extensions: 244156
Number of successful extensions: 1961
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1961
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 631882260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)