Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6026
(315 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 2.0
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 2.0
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 2.0
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 2.0
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 2.7
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 2.7
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 3.5
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 4.7
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 20 6.2
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 20 6.2
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 20 8.1
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 20 8.1
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 20 8.1
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 20 8.1
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 20 8.1
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 20 8.1
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 20 8.1
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 20 8.1
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 20 8.1
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 20 8.1
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 20 8.1
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 20 8.1
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 20 8.1
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 20 8.1
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 20 8.1
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 20 8.1
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 20 8.1
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.8 bits (44), Expect = 2.0
Identities = 11/39 (28%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +2
Query: 116 LKHDLQHDRNGSWWNHR--HNNRNEYDELH*GTTDDDWW 226
LK++++ W++ R ++NR++Y+ L+ DD W
Sbjct: 105 LKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIW 143
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.8 bits (44), Expect = 2.0
Identities = 11/39 (28%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +2
Query: 116 LKHDLQHDRNGSWWNHR--HNNRNEYDELH*GTTDDDWW 226
LK++++ W++ R ++NR++Y+ L+ DD W
Sbjct: 105 LKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIW 143
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 2.0
Identities = 11/39 (28%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +2
Query: 116 LKHDLQHDRNGSWWNHR--HNNRNEYDELH*GTTDDDWW 226
LK++++ W++ R ++NR++Y+ L+ DD W
Sbjct: 156 LKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIW 194
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.8 bits (44), Expect = 2.0
Identities = 11/39 (28%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +2
Query: 116 LKHDLQHDRNGSWWNHR--HNNRNEYDELH*GTTDDDWW 226
LK++++ W++ R ++NR++Y+ L+ DD W
Sbjct: 105 LKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIW 143
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 2.7
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +2
Query: 143 NGSWWNHRHNNRNEYDELH 199
N ++ N+ +NN N Y +L+
Sbjct: 335 NNNYNNYNNNNYNNYKKLY 353
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 2.7
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +3
Query: 228 MPSNYVPGLSAYYNISSFCQRPGQTRRW 311
+PS+Y+ + A +F RP R W
Sbjct: 330 IPSHYIEQIPAPVYYGNFPPRPIMVRPW 357
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.0 bits (42), Expect = 3.5
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = +2
Query: 134 HDRNGSWWNHRHNNRNEYDELH 199
++ N + +N+ +NN N Y +L+
Sbjct: 97 NNNNYNNYNYNNNNYNNYKKLY 118
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 20.6 bits (41), Expect = 4.7
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 107 PNVLKHDLQHDRNGSWWNHRHNNRNEYDE 193
P ++ L ++ N S +N+ +NN N Y++
Sbjct: 79 PKIIS-SLSNNYNYSNYNNYNNNYNNYNK 106
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 20.2 bits (40), Expect = 6.2
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +2
Query: 215 DDWWNAI*LRSWL 253
DDW + + L SW+
Sbjct: 83 DDWTSVMELHSWM 95
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 20.2 bits (40), Expect = 6.2
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3
Query: 252 LSAYYNISSFCQRPGQTRRW 311
+ A YN C R G+ +R+
Sbjct: 241 IMARYNCERLCNRLGRVKRF 260
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 19.8 bits (39), Expect = 8.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 140 RNGSWWNHRHNNRNE 184
RNG+ N NN+N+
Sbjct: 515 RNGNRQNDNQNNQND 529
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 19.8 bits (39), Expect = 8.1
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +3
Query: 228 MPSNYVPGLSAYYNISSFCQRPGQTRRW 311
+PS+Y+ + +F RP R W
Sbjct: 82 IPSHYIEQIPVPVYYGNFPPRPIMVRPW 109
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 19.8 bits (39), Expect = 8.1
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +3
Query: 228 MPSNYVPGLSAYYNISSFCQRPGQTRRW 311
+PS+Y+ + +F RP R W
Sbjct: 82 IPSHYIEQIPVPVYYGNFPPRPIMVRPW 109
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 19.8 bits (39), Expect = 8.1
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +3
Query: 228 MPSNYVPGLSAYYNISSFCQRPGQTRRW 311
+PS+Y+ + +F RP R W
Sbjct: 82 IPSHYIEQIPVPVYYGNFPPRPIMVRPW 109
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 19.8 bits (39), Expect = 8.1
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +3
Query: 228 MPSNYVPGLSAYYNISSFCQRPGQTRRW 311
+PS+Y+ + +F RP R W
Sbjct: 82 IPSHYIEQIPVPVYYGNFPPRPIMVRPW 109
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 19.8 bits (39), Expect = 8.1
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +3
Query: 228 MPSNYVPGLSAYYNISSFCQRPGQTRRW 311
+PS+Y+ + +F RP R W
Sbjct: 82 IPSHYIEQIPVPVYYGNFPPRPIMVRPW 109
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 19.8 bits (39), Expect = 8.1
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +3
Query: 228 MPSNYVPGLSAYYNISSFCQRPGQTRRW 311
+PS+Y+ + +F RP R W
Sbjct: 82 IPSHYIEQIPVPVYYGNFPPRPIMVRPW 109
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 19.8 bits (39), Expect = 8.1
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +3
Query: 228 MPSNYVPGLSAYYNISSFCQRPGQTRRW 311
+PS+Y+ + +F RP R W
Sbjct: 82 IPSHYIEQIPVPVYYGNFPPRPIMVRPW 109
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 8.1
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +3
Query: 228 MPSNYVPGLSAYYNISSFCQRPGQTRRW 311
+PS+Y+ + +F RP R W
Sbjct: 331 IPSHYIEQIPVPVYYGNFPPRPIMVRPW 358
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 8.1
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +3
Query: 228 MPSNYVPGLSAYYNISSFCQRPGQTRRW 311
+PS+Y+ + +F RP R W
Sbjct: 331 IPSHYIEQIPVPVYYGNFPPRPIMVRPW 358
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 8.1
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +3
Query: 228 MPSNYVPGLSAYYNISSFCQRPGQTRRW 311
+PS+Y+ + +F RP R W
Sbjct: 331 IPSHYIEQIPVPVYYGNFPPRPIMVRPW 358
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 8.1
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +3
Query: 228 MPSNYVPGLSAYYNISSFCQRPGQTRRW 311
+PS+Y+ + +F RP R W
Sbjct: 331 IPSHYIEQIPVPVYYGNFPPRPIMVRPW 358
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 8.1
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +3
Query: 228 MPSNYVPGLSAYYNISSFCQRPGQTRRW 311
+PS+Y+ + +F RP R W
Sbjct: 331 IPSHYIEQIPVPVYYGNFPPRPIMVRPW 358
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 8.1
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +3
Query: 228 MPSNYVPGLSAYYNISSFCQRPGQTRRW 311
+PS+Y+ + +F RP R W
Sbjct: 331 IPSHYIEQIPVPVYYGNFPPRPIMVRPW 358
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 19.8 bits (39), Expect = 8.1
Identities = 6/26 (23%), Positives = 16/26 (61%)
Frame = +2
Query: 116 LKHDLQHDRNGSWWNHRHNNRNEYDE 193
L ++ ++ ++ N+ +NN N Y++
Sbjct: 318 LSNNYKYSNYNNYNNYNNNNYNNYNK 343
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 19.8 bits (39), Expect = 8.1
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +3
Query: 228 MPSNYVPGLSAYYNISSFCQRPGQTRRW 311
+PS+Y+ + +F RP R W
Sbjct: 315 IPSHYIEQIPVPVYYGNFPPRPIMVRPW 342
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 19.8 bits (39), Expect = 8.1
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +3
Query: 228 MPSNYVPGLSAYYNISSFCQRPGQTRRW 311
+PS+Y+ + +F RP R W
Sbjct: 331 IPSHYIEQIPVPVYYGNFPPRPIMVRPW 358
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,759
Number of Sequences: 438
Number of extensions: 1591
Number of successful extensions: 32
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6719922
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
- SilkBase 1999-2023 -